mRNA_L-elsbetiae_contig21307.6516.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21307.6516.1 vs. uniprot
Match: A0A6H5JWM1_9PHAE (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWM1_9PHAE) HSP 1 Score: 125 bits (313), Expect = 5.660e-30 Identity = 64/82 (78.05%), Postives = 69/82 (84.15%), Query Frame = -2 Query: 3 RGAATLLAGAALWLVAAPLLAAGLYETAFVVTAPEWVARGPVGALPCWSQPLRTLALGVFLLHAWACACRAGAPRWIAAMLR 248 R AATLLAGA LWLV APLLAAGL+ETAFVVTA W +GP+GALPC SQPLR+LALG+FLLHAWA ACRA PRWIAA R Sbjct: 1449 RAAATLLAGAVLWLVVAPLLAAGLFETAFVVTAQAWAEKGPLGALPCCSQPLRSLALGMFLLHAWAYACRARVPRWIAATRR 1530 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21307.6516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21307.6516.1 >prot_L-elsbetiae_contig21307.6516.1 ID=prot_L-elsbetiae_contig21307.6516.1|Name=mRNA_L-elsbetiae_contig21307.6516.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=175bp ALSIAAIHLGAPARQAQAHACRRNTPRASVRSGWLQQGSAPTGPLATHSGback to top mRNA from alignment at L-elsbetiae_contig21307:1275..1800+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21307.6516.1 ID=mRNA_L-elsbetiae_contig21307.6516.1|Name=mRNA_L-elsbetiae_contig21307.6516.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=526bp|location=Sequence derived from alignment at L-elsbetiae_contig21307:1275..1800+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21307:1275..1800+ >mRNA_L-elsbetiae_contig21307.6516.1 ID=mRNA_L-elsbetiae_contig21307.6516.1|Name=mRNA_L-elsbetiae_contig21307.6516.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1050bp|location=Sequence derived from alignment at L-elsbetiae_contig21307:1275..1800+ (Laminarionema elsbetiae ELsaHSoW15)back to top |