mRNA_L-elsbetiae_contig21293.6504.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A6A5A5T2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A5T2_9STRA) HSP 1 Score: 219 bits (557), Expect = 1.700e-70 Identity = 102/122 (83.61%), Postives = 113/122 (92.62%), Query Frame = 1 Query: 1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVRVRPVLFSP 366 ++ G+ ++WNNLNTLCWAIGSISGAM+EE EKRFLVTVIKDLL LCE+K+GKDNKAVVASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHELHPGVQDMACDTFLKIAQK R + V+ P Sbjct: 40 QVEGNGWSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKQGKDNKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCRRKFVVLQP 161
BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A7S2UZ09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ09_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.400e-69 Identity = 99/113 (87.61%), Postives = 107/113 (94.69%), Query Frame = 1 Query: 4 ISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVR 342 + G +++WNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLL LCE+KRGKDNKAVVASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHE HPGVQDMAC+TFLKIA K + Sbjct: 1 VDGQEWSWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHEKHPGVQDMACNTFLKIANKCK 113
BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A7S0AX47_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AX47_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.480e-67 Identity = 97/114 (85.09%), Postives = 107/114 (93.86%), Query Frame = 1 Query: 1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVR 342 ++ G+ ++WNNLNTLCWAIGSISGAM+EEEEKRFLVTVIKDLL LCE KRGKDNKAV+ASNIMYVVGQYPRFL+AHWKFL+TVVNKLFEFMHE HPGVQDMACDTFLKIA K + Sbjct: 59 QVDGTAWSWNNLNTLCWAIGSISGAMSEEEEKRFLVTVIKDLLGLCEQKRGKDNKAVIASNIMYVVGQYPRFLKAHWKFLKTVVNKLFEFMHESHPGVQDMACDTFLKIATKCK 172
BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A4W5LUE1_9TELE (Uncharacterized protein n=2 Tax=Euteleostomi TaxID=117571 RepID=A0A4W5LUE1_9TELE) HSP 1 Score: 209 bits (532), Expect = 2.940e-67 Identity = 94/114 (82.46%), Postives = 108/114 (94.74%), Query Frame = 1 Query: 1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVR 342 +++G++++W NLNTLCWAIGSISGAM+EE+EKRFLVTVIKDLL LCE KRGKDNKA++ASNIMY+VGQYPRFLRAHWKFL+TVVNKLFEFMHE H GVQDMACDTF+KIAQK R Sbjct: 8 QVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCR 121
BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: D8LS67_ECTSI (CRM1_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS67_ECTSI) HSP 1 Score: 225 bits (574), Expect = 3.700e-67 Identity = 106/114 (92.98%), Postives = 112/114 (98.25%), Query Frame = 1 Query: 1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVR 342 ++SGSQFTWN+LNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNL E+KRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKI+QK + Sbjct: 304 EVSGSQFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQKCK 417
BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A6H5JJK2_9PHAE (CRM1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK2_9PHAE) HSP 1 Score: 224 bits (571), Expect = 4.660e-66 Identity = 105/114 (92.11%), Postives = 112/114 (98.25%), Query Frame = 1 Query: 1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVR 342 ++SGSQFTWN+LNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNL E+KRGKDNKAVVASNIMYVVGQYPRFL+AHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKI+QK + Sbjct: 351 EVSGSQFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLKAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQKCK 464
BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A3L6V416_9STRA (CRM1_C domain-containing protein (Fragment) n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V416_9STRA) HSP 1 Score: 220 bits (561), Expect = 6.630e-66 Identity = 103/122 (84.43%), Postives = 113/122 (92.62%), Query Frame = 1 Query: 1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVRVRPVLFSP 366 ++ G+ ++WNNLNTLCWAIGSISGAM+EE EKRFLVTVIKDLL LCE+KRGKDNKAVVASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHELHPGVQDMACDTFLKIAQK R + V+ P Sbjct: 299 QVEGNGWSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCRRKFVVLQP 420
BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A397C6E5_9STRA (CRM1_C domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C6E5_9STRA) HSP 1 Score: 220 bits (561), Expect = 1.100e-65 Identity = 103/122 (84.43%), Postives = 113/122 (92.62%), Query Frame = 1 Query: 1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVRVRPVLFSP 366 ++ G+ ++WNNLNTLCWAIGSISGAM+EE EKRFLVTVIKDLL LCE+KRGKDNKAVVASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHELHPGVQDMACDTFLKIAQK R + V+ P Sbjct: 154 QVEGNGWSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCRRKFVVLQP 275
BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A7J7IJG7_9RHOD (Exportin-1 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJG7_9RHOD) HSP 1 Score: 210 bits (535), Expect = 1.880e-65 Identity = 97/114 (85.09%), Postives = 107/114 (93.86%), Query Frame = 1 Query: 1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVR 342 ++ GS+++W NLNTLCWAIGSISGAM+EE EKRFL+ VIKDLL LCE KRGKDNKAVVA+NIMYVVGQYPRFLRAHW+FL+TVVNKLFEFMHELHPGVQDMACDTFLKIAQK R Sbjct: 164 QLDGSEWSWQNLNTLCWAIGSISGAMSEESEKRFLIHVIKDLLRLCEEKRGKDNKAVVAANIMYVVGQYPRFLRAHWRFLKTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCR 277
BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A397DQY2_9STRA (Importin N-terminal domain-containing protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DQY2_9STRA) HSP 1 Score: 220 bits (561), Expect = 2.360e-65 Identity = 103/122 (84.43%), Postives = 113/122 (92.62%), Query Frame = 1 Query: 1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVRVRPVLFSP 366 ++ G+ ++WNNLNTLCWAIGSISGAM+EE EKRFLVTVIKDLL LCE+KRGKDNKAVVASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHELHPGVQDMACDTFLKIAQK R + V+ P Sbjct: 370 QVEGNGWSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCRRKFVVLQP 491 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21293.6504.1 >prot_L-elsbetiae_contig21293.6504.1 ID=prot_L-elsbetiae_contig21293.6504.1|Name=mRNA_L-elsbetiae_contig21293.6504.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRback to top mRNA from alignment at L-elsbetiae_contig21293:709..1612- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21293.6504.1 ID=mRNA_L-elsbetiae_contig21293.6504.1|Name=mRNA_L-elsbetiae_contig21293.6504.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=904bp|location=Sequence derived from alignment at L-elsbetiae_contig21293:709..1612- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21293:709..1612- >mRNA_L-elsbetiae_contig21293.6504.1 ID=mRNA_L-elsbetiae_contig21293.6504.1|Name=mRNA_L-elsbetiae_contig21293.6504.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=756bp|location=Sequence derived from alignment at L-elsbetiae_contig21293:709..1612- (Laminarionema elsbetiae ELsaHSoW15)back to top |