prot_L-elsbetiae_contig21293.6504.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig21293.6504.1
Unique Name	prot_L-elsbetiae_contig21293.6504.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	126

Homology

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BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A6A5A5T2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A5T2_9STRA)

HSP 1 Score: 219 bits (557), Expect = 1.700e-70
Identity = 102/122 (83.61%), Postives = 113/122 (92.62%), Query Frame = 0

Query:    1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVRVRPVLFSP 122
            ++ G+ ++WNNLNTLCWAIGSISGAM+EE EKRFLVTVIKDLL LCE+K+GKDNKAVVASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHELHPGVQDMACDTFLKIAQK R + V+  P
Sbjct:   40 QVEGNGWSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKQGKDNKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCRRKFVVLQP 161

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BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A7S2UZ09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ09_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.400e-69
Identity = 99/113 (87.61%), Postives = 107/113 (94.69%), Query Frame = 0

Query:    2 ISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVR 114
            + G +++WNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLL LCE+KRGKDNKAVVASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHE HPGVQDMAC+TFLKIA K +
Sbjct:    1 VDGQEWSWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHEKHPGVQDMACNTFLKIANKCK 113

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BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A7S0AX47_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AX47_9STRA)

HSP 1 Score: 211 bits (536), Expect = 1.480e-67
Identity = 97/114 (85.09%), Postives = 107/114 (93.86%), Query Frame = 0

Query:    1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVR 114
            ++ G+ ++WNNLNTLCWAIGSISGAM+EEEEKRFLVTVIKDLL LCE KRGKDNKAV+ASNIMYVVGQYPRFL+AHWKFL+TVVNKLFEFMHE HPGVQDMACDTFLKIA K +
Sbjct:   59 QVDGTAWSWNNLNTLCWAIGSISGAMSEEEEKRFLVTVIKDLLGLCEQKRGKDNKAVIASNIMYVVGQYPRFLKAHWKFLKTVVNKLFEFMHESHPGVQDMACDTFLKIATKCK 172

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BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A4W5LUE1_9TELE (Uncharacterized protein n=2 Tax=Euteleostomi TaxID=117571 RepID=A0A4W5LUE1_9TELE)

HSP 1 Score: 209 bits (532), Expect = 2.940e-67
Identity = 94/114 (82.46%), Postives = 108/114 (94.74%), Query Frame = 0

Query:    1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVR 114
            +++G++++W NLNTLCWAIGSISGAM+EE+EKRFLVTVIKDLL LCE KRGKDNKA++ASNIMY+VGQYPRFLRAHWKFL+TVVNKLFEFMHE H GVQDMACDTF+KIAQK R
Sbjct:    8 QVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCR 121

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BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: D8LS67_ECTSI (CRM1_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS67_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 3.700e-67
Identity = 106/114 (92.98%), Postives = 112/114 (98.25%), Query Frame = 0

Query:    1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVR 114
            ++SGSQFTWN+LNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNL E+KRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKI+QK +
Sbjct:  304 EVSGSQFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQKCK 417

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BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A6H5JJK2_9PHAE (CRM1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK2_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 4.660e-66
Identity = 105/114 (92.11%), Postives = 112/114 (98.25%), Query Frame = 0

Query:    1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVR 114
            ++SGSQFTWN+LNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNL E+KRGKDNKAVVASNIMYVVGQYPRFL+AHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKI+QK +
Sbjct:  351 EVSGSQFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLKAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQKCK 464

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BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A3L6V416_9STRA (CRM1_C domain-containing protein (Fragment) n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V416_9STRA)

HSP 1 Score: 220 bits (561), Expect = 6.630e-66
Identity = 103/122 (84.43%), Postives = 113/122 (92.62%), Query Frame = 0

Query:    1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVRVRPVLFSP 122
            ++ G+ ++WNNLNTLCWAIGSISGAM+EE EKRFLVTVIKDLL LCE+KRGKDNKAVVASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHELHPGVQDMACDTFLKIAQK R + V+  P
Sbjct:  299 QVEGNGWSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCRRKFVVLQP 420

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BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A397C6E5_9STRA (CRM1_C domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C6E5_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.100e-65
Identity = 103/122 (84.43%), Postives = 113/122 (92.62%), Query Frame = 0

Query:    1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVRVRPVLFSP 122
            ++ G+ ++WNNLNTLCWAIGSISGAM+EE EKRFLVTVIKDLL LCE+KRGKDNKAVVASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHELHPGVQDMACDTFLKIAQK R + V+  P
Sbjct:  154 QVEGNGWSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCRRKFVVLQP 275

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BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A7J7IJG7_9RHOD (Exportin-1 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJG7_9RHOD)

HSP 1 Score: 210 bits (535), Expect = 1.880e-65
Identity = 97/114 (85.09%), Postives = 107/114 (93.86%), Query Frame = 0

Query:    1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVR 114
            ++ GS+++W NLNTLCWAIGSISGAM+EE EKRFL+ VIKDLL LCE KRGKDNKAVVA+NIMYVVGQYPRFLRAHW+FL+TVVNKLFEFMHELHPGVQDMACDTFLKIAQK R
Sbjct:  164 QLDGSEWSWQNLNTLCWAIGSISGAMSEESEKRFLIHVIKDLLRLCEEKRGKDNKAVVAANIMYVVGQYPRFLRAHWRFLKTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCR 277

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BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Match: A0A397DQY2_9STRA (Importin N-terminal domain-containing protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DQY2_9STRA)

HSP 1 Score: 220 bits (561), Expect = 2.360e-65
Identity = 103/122 (84.43%), Postives = 113/122 (92.62%), Query Frame = 0

Query:    1 KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKVRVRPVLFSP 122
            ++ G+ ++WNNLNTLCWAIGSISGAM+EE EKRFLVTVIKDLL LCE+KRGKDNKAVVASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHELHPGVQDMACDTFLKIAQK R + V+  P
Sbjct:  370 QVEGNGWSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCRRKFVVLQP 491

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig21293.6504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6A5A5T2_9STRA	1.700e-70	83.61	Uncharacterized protein (Fragment) n=1 Tax=Aphanom...	[more]
A0A7S2UZ09_9STRA	1.400e-69	87.61	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A7S0AX47_9STRA	1.480e-67	85.09	Hypothetical protein (Fragment) n=1 Tax=Minutocell...	[more]
A0A4W5LUE1_9TELE	2.940e-67	82.46	Uncharacterized protein n=2 Tax=Euteleostomi TaxID...	[more]
D8LS67_ECTSI	3.700e-67	92.98	CRM1_C domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5JJK2_9PHAE	4.660e-66	92.11	CRM1_C domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A3L6V416_9STRA	6.630e-66	84.43	CRM1_C domain-containing protein (Fragment) n=5 Ta...	[more]
A0A397C6E5_9STRA	1.100e-65	84.43	CRM1_C domain-containing protein (Fragment) n=1 Ta...	[more]
A0A7J7IJG7_9RHOD	1.880e-65	85.09	Exportin-1 n=1 Tax=Cyanidiococcus yangmingshanensi...	[more]
A0A397DQY2_9STRA	2.360e-65	84.43	Importin N-terminal domain-containing protein (Fra...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040485	Exportin-1, repeat 3	PFAM	PF18787	CRM1_repeat_3	coord: 4..53 e-value: 1.3E-30 score: 105.2
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..122 e-value: 1.3E-68 score: 233.8
None	No IPR available	PANTHER	PTHR11223	EXPORTIN 1/5	coord: 2..114
None	No IPR available	PANTHER	PTHR11223:SF2	EXPORTIN-1	coord: 2..114
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 7..113

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig21293	contig	L-elsbetiae_contig21293:709..1612 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig21293.6504.1	mRNA_L-elsbetiae_contig21293.6504.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig21293 709..1612 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig21293.6504.1 ID=prot_L-elsbetiae_contig21293.6504.1|Name=mRNA_L-elsbetiae_contig21293.6504.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp
KISGSQFTWNNLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLCEIKR
GKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQD
MACDTFLKIAQKVRVRPVLFSPLRR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR040485	XPO1_repeat_3
IPR011989	ARM-like
IPR016024	ARM-type_fold