mRNA_L-elsbetiae_contig2125.6485.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2125.6485.1
Unique NamemRNA_L-elsbetiae_contig2125.6485.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig2125.6485.1 vs. uniprot
Match: A0A6H5JML9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML9_9PHAE)

HSP 1 Score: 552 bits (1422), Expect = 4.640e-171
Identity = 426/841 (50.65%), Postives = 473/841 (56.24%), Query Frame = 2 
Query:  131 RHGKSTGSAETTAAAAIAGLDWLAGVFRLGLACEKAAPGEAASALASAPEATSXXXXXXXXXXXXXXXXXM--------------PATRSMRRLRRAEAGTRWLACRLMAC--GGDGARSPWPWPALRRDCALQAMALCQQGDEAVAVGLLGEALPDGPVESCGVDVTATAGARADDADPAAAAAG---ASSLLRKLFRGAISDSVALSQASFHLDGRWASLQSLGACAPPGAASLLPLPQHWLFLPLASQGGEKAASAAVSACLSSLVRLEGENSAYVRAGGSGDGGGSXXRDGGGRKSRFVSPEAKLYHLANACLYGASVLSGPGAEENFDWLFGRYLGQCGAGFEGRLTDVVARLALSSAPDPAKMIADAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----ERALLELVKDLVGSFLADSFGLPSFARVLRVFVRTGFPAATRRVVWKELGDVGLLHLLDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCADDVYLYPADVEGAIVEAYLAALEHPRFGPTLARGRE----------GQHSLEGRKEAAGRAATKFAGVTAAAAAGPAPAAGVAATGESVRGGEXXXXXXXXXXXXXXGVSMWEVAVHHLACYLFSPPPDPTPPV------------AGADAATPSCRVGVKEKEEREEEKLPWQPDFGRRKTFERLLQQQHGDKLRGGRGAT-----GSVAAAVLGHMCRG-SAPGDGASTGDNXXXXXXXXXX-GGAR--EVCASTSKLGATRRDSLRAYYRESGRPGGGSVTSGVAGMAGDRGAGGDSSSDGGDDNIVAWLDEDREINETVERLA 2491
            + G S+G A T      AGLDWL GVFRLGLACE+A PGEAA+ALASAPEAT+   XX                           P    +RR+RRAEAG RWL CRL+A    G G    WPW ALRRDCALQAMALC++GDEA+AVGLL EALP   V+S      A  G+     DPAA       ++SLLR LFRGAISD VALSQ+SFHLDGRWASLQSL ACAPPG ASLLPLP HWLFLPL SQGG KAAS AVSACLS LV LE E S YV           XX       +    PE KLYHLANACLYGASVLSG GA +NFDWLF RYL QCGAGFEGRL +V+ARLAL+SAPDPAKMIADAA A XXXXXXXXXXXXXXXXXXXXXX              ERALLE VKDLV SFLADSFGLPSFARVLRVFVRTGFP A RRVVWKELGDVGLLHLLDPP                                        D  YLYP DV+G IVE YL ALEHPRFGP                 G+    GR E   R +                A   AATG +V  G                V+M E+AVHHLACYLF P P P                A A    P C          ++   PW+PDF RRK F+RLL ++H ++L  GRG       GSVAAAVLGH   G  +P   A+ G+            GGAR  E  A  S+LG  RR  L+AY R     G G  T  VAG                  ++V+WL+E+R + + VERLA
Sbjct:  669 QRGVSSGEAVT------AGLDWLCGVFRLGLACERAMPGEAAAALASAPEATAAALXXFLATAGPTAGAVXXGGALTTPTAAVAPPPATFLRRVRRAEAGARWLGCRLLALVSRGVGRGGGWPWAALRRDCALQAMALCERGDEAIAVGLLAEALPGSTVDS-----PAENGSERPSDDPAAXXXXXXXSASLLRTLFRGAISDPVALSQSSFHLDGRWASLQSLKACAPPGTASLLPLPPHWLFLPLVSQGGGKAASMAVSACLSLLVELEREESTYVWG---------XXXXXXXXXTGCNPPEVKLYHLANACLYGASVLSGLGAVQNFDWLFSRYLEQCGAGFEGRLAEVIARLALASAPDPAKMIADAATAXXXXXXXXXXXXXXXXXXXXXXXARDRARAARRQSHAERALLEFVKDLVASFLADSFGLPSFARVLRVFVRTGFPVAARRVVWKELGDVGLLHLLDPPPAGATAPAPAAAVPSHDSVPAAHAINGGGCV--------TDQAYLYPPDVDGDIVEVYLTALEHPRFGPAAXXXXXXXXXXXXXXXGERRRHGRVEETERGSALS-------------ARAAAATGLAVEAGRDDLSPSAAAAGGW-AVTMREIAVHHLACYLFPPSPRPXXXXXXXXXXXXXXXXAPAAPCPPECCKD-------DQGDPPWRPDFARRKMFQRLL-REHRERLGRGRGEXXXXXXGSVAAAVLGHHGLGVDSPAVVAADGNRATEERPAIQWEGGARGREGRAWVSELGERRRTLLQAYCRAC--SGDGRRTVAVAGDXXXXXXXXXXXXXXXXVDVVSWLEEERHVEDVVERLA 1457
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BLAST of mRNA_L-elsbetiae_contig2125.6485.1 vs. uniprot
Match: D8LHI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHI7_ECTSI)

HSP 1 Score: 341 bits (875), Expect = 1.380e-94
Identity = 227/346 (65.61%), Postives = 248/346 (71.68%), Query Frame = 2 
Query:  116 DGADQRHGKSTGSAETTAAAAIAGLDWLAGVFRLGLACEKAAPGEAASALASAPEATSXXXXXXXXXXXXXXXXXM---------------PATRSMRRLRRAEAGTRWLACRLMA--CGGDGARSPWPWPALRRDCALQAMALCQQGDEAVAVGLLGEALPDGPVESCGVDVTATAGARADDADPAAAAAG----ASSLLRKLFRGAISDSVALSQASFHLDGRWASLQSLGACAPPGAASLLPLPQHWLFLPLASQGGEKAASAAVSACLSSLVRLEGENSAYVRAGGSGDGGGSXXRDGGGRKSRFVSPEAKLYHLANACLYGASVLSGPGAEENFDWLFGRY 1090
            DG  QR G S+G A     AA AGLDWL+GVFRLGLACE+A PGEAA+ALASAPEAT+XXXXXXXXXXXXXXXXX                P    +RR+RRAEAG RWL CRL+A  C G G    WPW ALRRDCALQAMALC++GDEA+AVGLL EALP   V+S   +     G+     DPAAAA G    ++SLLR LFRGAISD VALSQ+SFHLDGRWASLQSL AC PPG ASLLPLP HWLFLPLASQGGEKAAS AVSACLS LV+LE E SAYV +GG   G G             VSPE KLYHLANACLYGASVLSG G  ++FDWLF RY
Sbjct: 1126 DGFSQR-GVSSGEA-----AAAAGLDWLSGVFRLGLACERAVPGEAAAALASAPEATAXXXXXXXXXXXXXXXXXXXXXXXXXXPTAAVAPPPATFLRRVRRAEAGARWLGCRLLALGCRGGGREGGWPWAALRRDCALQAMALCERGDEAIAVGLLAEALPGSTVDSPEEE-----GSERPSDDPAAAAVGTAAASTSLLRMLFRGAISDPVALSQSSFHLDGRWASLQSLKACTPPGTASLLPLPPHWLFLPLASQGGEKAASTAVSACLSLLVQLEREESAYVWSGGGXGGTGC------------VSPEVKLYHLANACLYGASVLSGLGVVQHFDWLFSRY 1448
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BLAST of mRNA_L-elsbetiae_contig2125.6485.1 vs. uniprot
Match: A0A835YNX8_9STRA (RPAP1_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNX8_9STRA)

HSP 1 Score: 104 bits (259), Expect = 8.500e-19
Identity = 98/319 (30.72%), Postives = 126/319 (39.50%), Query Frame = 2 
Query:  653 LRKLFRGAISDSVALSQA-SFHLDGRWASLQSL----------GACAPPGAASLLPLPQHWLFLPLASQGGEKAASAAVSACLSSLVRLEGEN--SAYVRAGGSGDGGGSXXRDGGGRKSRFVSPEAKLYHLANACLYGASVLSGPGAEENFDWLFGRYLGQCGAGF----------------------------EGRLTDVVARLALSS-APDPAKMIADAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERALLELVKDLVGSFLADSFGLPSFARVLRVFVRTGFPAATRRVVWKELGDVGLLHLLDPP 1483
            L  L+ G++ +   L+ + + H  G W SLQSL           A A    ASLLPLP HWL LPL S+G   AA  AVS CL  L+ ++     S Y+RA                     ++PE +LYHL  AC YG  VL+ P     F  L  R+  QC                                E R   VV RL+ S  AP   +    AA A                                    L   V DL+G+F+ DS G   FAR L + +R   P   R ++W+ELG +GLL LL PP
Sbjct:  881 LEALYCGSMCEVATLAHSRALHTGGAWHSLQSLTLRQRQHAVGAAAAAAEPASLLPLPPHWLLLPLTSRGSGAAAVRAVSQCLRLLLSVDESPALSTYMRA---------------------LAPELRLYHLMAACTYGQGVLADPAVAPPFRALLSRWAQQCFIDAAXXXXXXXXXXXXXXXXXXXXXXXXQCPEDRFVAVVERLSASRVAPQLQRSTPSAADAQQHP-------------------------------GLTAFVSDLLGAFVEDSCGDAGFARALLLLLRPRMPPLARALIWRELGALGLLPLLAPP 1147
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2125.6485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JML9_9PHAE4.640e-17150.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHI7_ECTSI1.380e-9465.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YNX8_9STRA8.500e-1930.72RPAP1_C domain-containing protein n=1 Tax=Tribonem... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2125contigL-elsbetiae_contig2125:11219..16322 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score300.1
Seed ortholog evalue2.9e-78
Seed eggNOG ortholog2880.D8LHI7
Preferred nameRPAP1
KEGG koko:K19496,ko:K20826
KEGG TC1.A.17.1.1,1.A.17.1.22
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006351,GO:0006366,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0030154,GO:0030880,GO:0032502,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048869,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.transcription by RNA polymerase II
EggNOG OGsKOG4732@1,KOG4732@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03021,ko04040
Ec32 ortholog descriptionRNA polymerase II-associated protein 1, C-terminal
Ec32 orthologEc-10_002060.1
Exons5
Model size3384
Cds size2172
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815870.3945837-UTR-L-elsbetiae_contig2125:11218..115581622815870.3945837-UTR-L-elsbetiae_contig2125:11218..11558Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2125 11219..11558 +
1691683158.032158-UTR-L-elsbetiae_contig2125:11218..115581691683158.032158-UTR-L-elsbetiae_contig2125:11218..11558Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2125 11219..11558 +
1622815870.463195-UTR-L-elsbetiae_contig2125:15450..163221622815870.463195-UTR-L-elsbetiae_contig2125:15450..16322Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2125 15451..16322 +
1691683158.0955596-UTR-L-elsbetiae_contig2125:15450..163221691683158.0955596-UTR-L-elsbetiae_contig2125:15450..16322Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2125 15451..16322 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815870.4068394-CDS-L-elsbetiae_contig2125:11558..117021622815870.4068394-CDS-L-elsbetiae_contig2125:11558..11702Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2125 11559..11702 +
1691683158.0468004-CDS-L-elsbetiae_contig2125:11558..117021691683158.0468004-CDS-L-elsbetiae_contig2125:11558..11702Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2125 11559..11702 +
1622815870.4195702-CDS-L-elsbetiae_contig2125:12361..125381622815870.4195702-CDS-L-elsbetiae_contig2125:12361..12538Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2125 12362..12538 +
1691683158.0612202-CDS-L-elsbetiae_contig2125:12361..125381691683158.0612202-CDS-L-elsbetiae_contig2125:12361..12538Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2125 12362..12538 +
1622815870.4291036-CDS-L-elsbetiae_contig2125:13020..131851622815870.4291036-CDS-L-elsbetiae_contig2125:13020..13185Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2125 13021..13185 +
1691683158.0693805-CDS-L-elsbetiae_contig2125:13020..131851691683158.0693805-CDS-L-elsbetiae_contig2125:13020..13185Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2125 13021..13185 +
1622815870.4389791-CDS-L-elsbetiae_contig2125:13414..136741622815870.4389791-CDS-L-elsbetiae_contig2125:13414..13674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2125 13415..13674 +
1691683158.0795069-CDS-L-elsbetiae_contig2125:13414..136741691683158.0795069-CDS-L-elsbetiae_contig2125:13414..13674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2125 13415..13674 +
1622815870.4493768-CDS-L-elsbetiae_contig2125:14024..154501622815870.4493768-CDS-L-elsbetiae_contig2125:14024..15450Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2125 14025..15450 +
1691683158.088129-CDS-L-elsbetiae_contig2125:14024..154501691683158.088129-CDS-L-elsbetiae_contig2125:14024..15450Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2125 14025..15450 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2125.6485.1prot_L-elsbetiae_contig2125.6485.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2125 11559..15450 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2125.6485.1

>prot_L-elsbetiae_contig2125.6485.1 ID=prot_L-elsbetiae_contig2125.6485.1|Name=mRNA_L-elsbetiae_contig2125.6485.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=724bp
MPATRSMRRLRRAEAGTRWLACRLMACGGDGARSPWPWPALRRDCALQAM
ALCQQGDEAVAVGLLGEALPDGPVESCGVDVTATAGARADDADPAAAAAG
ASSLLRKLFRGAISDSVALSQASFHLDGRWASLQSLGACAPPGAASLLPL
PQHWLFLPLASQGGEKAASAAVSACLSSLVRLEGENSAYVRAGGSGDGGG
SGGRDGGGRKSRFVSPEAKLYHLANACLYGASVLSGPGAEENFDWLFGRY
LGQCGAGFEGRLTDVVARLALSSAPDPAKMIADAAGAAAGAGAGAAGTGG
GAEGTTARDRARAARAQSHAERALLELVKDLVGSFLADSFGLPSFARVLR
VFVRTGFPAATRRVVWKELGDVGLLHLLDPPSAAAVAATAAAAPSSSPRS
SAPAVCDNGSDNGGGGGSSCADDVYLYPADVEGAIVEAYLAALEHPRFGP
TLARGREGQHSLEGRKEAAGRAATKFAGVTAAAAAGPAPAAGVAATGESV
RGGEEESSSTAAAAAAAAGVSMWEVAVHHLACYLFSPPPDPTPPVAGADA
ATPSCRVGVKEKEEREEEKLPWQPDFGRRKTFERLLQQQHGDKLRGGRGA
TGSVAAAVLGHMCRGSAPGDGASTGDNGGQGGGRGGDGGAREVCASTSKL
GATRRDSLRAYYRESGRPGGGSVTSGVAGMAGDRGAGGDSSSDGGDDNIV
AWLDEDREINETVERLARATLRG*
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mRNA from alignment at L-elsbetiae_contig2125:11219..16322+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2125.6485.1 ID=mRNA_L-elsbetiae_contig2125.6485.1|Name=mRNA_L-elsbetiae_contig2125.6485.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5104bp|location=Sequence derived from alignment at L-elsbetiae_contig2125:11219..16322+ (Laminarionema elsbetiae ELsaHSoW15)
CGACGACGGCGGCAGCGGCAGCGGTGGCGGCAGCAGCGGCAGCGGTGGCG
GCGGCAGCGTCGGCATCGACGGCATCAGCGCCGGCATCGACGGCGGCAGC
ATCGGGCAGAATGAGGACGGCGCCGACCAACGCCACGGCAAGTCGACGGG
ATCGGCGGAGACGACCGCGGCGGCGGCGATTGCGGGGCTTGACTGGCTCG
CCGGCGTCTTTCGGCTGGGTCTGGCGTGCGAGAAGGCGGCCCCGGGAGAG
GCCGCGTCGGCCTTGGCTTCCGCGCCGGAGGCAACGTCAGCGGCCCTAGC
CGACTTCCTTGCCGCAACCACCGCCGCCGCCGCCGCCGCTATGCCAGCTA
CACGGTCCATGAGGAGACTTCGGCGCGCCGAGGCGGGGACGCGCTGGCTT
GCCTGCCGGTTGATGGCGTGCGGCGGCGACGGGGCGCGGAGTCCGTGGCC
CTGGCCAGCGTTGAGGAGAGACTGTGCCCTACAGGTGCGCAATGCGCGCG
CTTGTGTCTCGGGCGCGGTGTTTGATTTTGCCCCCGTCGAAGAGTTTTGC
GTTGTGCAGTCCATTGTTGTGCCTTTGTCTCTCACTCCCCGCACGGTAAC
ATGTGTTGTTTGGAGTTCGGTTTGTTGCTCCGCGCTGGCATGTTTTTTGT
TAGGTGCTGTGTACTTTGTGGGTGGCAATTGTTTGTTGCGCTGGGGTTGA
GTGGTTTGTGGGCTCGCTTCCCCTTACAACCACGTACGAGCCCCACGCAG
TACTGCTATTGACCGTACTTCTAAGGCAGTTGATGTCTTTTTCTCAGTGC
TTACTCACAACGGTTGCTTTTGAGTATGCTAGCGCAGAGCGCTGTCCTGC
TGGGTGGAGGGCGCCGAGTGGATAGAACGCGCGCCTTATACATGCGGTGG
TCGTCTCTTTGGGTGCGCCTTTTCAAGTCTTTGGGTTGTGCTGCCTGTGC
ACCGTAGTTAGTCGCGCGGTGTTGCTTTGGCACCACGCCCTCTAAACTTC
CTTGCTGTGTTTGCCCCCGTCTCTTCTCATATGTTGGCGGTGTTGCTTTG
GCACCGCGCCCTCTAAACTTGTTTGCTGTATTTGGCCCCCGTCTCTGTCG
TATGTTGGCGGTGTGATCTCGAACTACTACTCCCTTCCCACAGGCGATGG
CACTGTGCCAGCAGGGGGACGAAGCGGTCGCCGTGGGGCTGCTGGGGGAG
GCATTGCCTGACGGCCCCGTCGAGAGTTGTGGTGTCGACGTTACCGCGAC
GGCGGGGGCGAGGGCTGACGACGCCGATCCTGCCGCCGCTGCCGCAGGTG
CTTCGTCGCTCCTGCGCAAGGTGAGCCGATGCGGCATGATTCTGCCGCTG
GTGTTTCTACTGCTGTTGTTGCTGTTACTGGTGCTGCTGGTGCTGGTGCT
GCTGCCGTTGTTTGCTGCTGTCGTTTGGTCTCCTTGCTCTCGTTGTGTTG
TTGCTGTTCTTTGTTCATGCTCTTCTTATTTTGGCGTTGCTGTTGCTCTG
CTCGTTGTTGCCGTTGTCGTTCGGGCTGTCATGCCTCGCAATCCACACCC
CGTATAAATAAGTGTGGATATTCGCTATTTGCCCGACGTCACGCTTGGGG
ATTTGATTCCAAAATGTTTTTTTACAGTACCCCCGGAATGTATTAGCCCT
GTAGCTCGAAAGATGCACACATACACACAAACCAACCCGGCGTTTCGATT
ATTTTTGCCAATAAAAAAAAGCGCGCTCTCTCTCTCTCTCTCTCTCTCTC
TCTTACCTCTCTTTCGCTGTGTGTGTGTGTGTGTGTGTTTCATCTTGCCC
AGCTGTTTCGAGGGGCCATCAGCGACTCGGTGGCCCTGTCCCAGGCGTCT
TTCCACCTGGACGGGCGGTGGGCGTCGCTGCAGAGCCTCGGGGCGTGCGC
GCCTCCGGGGGCGGCCTCTCTTCTCCCCCTCCCCCAGCACTGGCTGTTTC
TTCCCCTGGCCAGCCAGGTGAATACACCACGTCTCTCTTCGCCGAGTTGC
TTTCGTTTTCGTCCAGAGGAAGAAGTTGCGCTATTTGGGAAGGTTTTGAG
TTTGATGCTGGTTGTCTTTTCTGGTTGTTTTCTAACCTCTGTCTGTCTGT
CTGTCTGTCTGTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTC
TCTTTTCTTCTCTGCTGTGCTTAACACGCCACGCGAACAACCCTAGGGCG
GAGAGAAGGCCGCGTCCGCAGCGGTTTCGGCTTGCCTCTCGTCGCTCGTC
CGCCTCGAGGGGGAGAACAGCGCTTACGTACGCGCCGGCGGGAGCGGCGA
CGGCGGCGGGAGCGGCGGGCGGGATGGAGGAGGCCGCAAAAGCCGCTTTG
TTTCGCCCGAGGCGAAGCTGTACCACCTGGCCAACGCGTGCCTGTACGGC
GCCTCCGTGCTGTCCGGGCCCGGCGCGGAAGAGAACTTCGACTGGCTGTT
CGGCAGGTGAAAAGGAGACCGGGGGAGTTGAAGGCGGGGAGGGCGAAAGC
ATGTACACAGAGGAGGGGCGAAGGTAGAGCCAAGGTACTACTGTTGTGCA
TCCTTTGAGGGTAGAGAGGGGCAAGAGCTGTCTGTTGTGGTAGGACGGTT
GCTGCTGGTTGGGGCTTGGTTATGGTTCATCCGCCATCGGCAAGCTATGT
CGCGGAGAAAAAAAGGAATCGATTCAACATTTATGACCTAGTTCATGCGC
TATTACTCCGCTGTGCGCCCAACTTACTACGGCACCACTTGCAGAAGAAC
CGCCTGCCGACTGCTGAACCTCCCCCCCCCCCCCGCGCCCCTGACTCTGC
TTTTAGGTACCTTGGTCAATGCGGGGCAGGCTTTGAAGGCCGGCTTACAG
ACGTCGTTGCCCGCTTGGCCCTCTCGTCCGCCCCGGACCCTGCTAAGATG
ATCGCCGATGCCGCTGGTGCCGCCGCCGGTGCCGGTGCTGGTGCCGCCGG
TACGGGCGGGGGCGCAGAGGGTACCACAGCGCGAGACCGAGCCCGCGCGG
CCCGCGCGCAGTCTCACGCGGAGCGCGCGCTGCTGGAGCTGGTCAAGGAT
CTGGTGGGCAGCTTCTTGGCGGACTCGTTCGGGCTCCCGAGCTTTGCCAG
GGTGCTGAGGGTGTTTGTGAGGACGGGCTTCCCGGCCGCCACTAGGCGGG
TCGTGTGGAAAGAGCTGGGCGACGTCGGTCTTCTGCACCTCCTAGATCCG
CCCTCCGCTGCCGCCGTTGCCGCCACCGCCGCCGCCGCTCCTTCTTCCTC
TCCCCGCTCTTCTGCCCCGGCCGTCTGCGACAACGGCAGCGACAACGGCG
GTGGCGGCGGCAGCTCTTGCGCGGACGATGTTTACCTCTACCCGGCCGAC
GTTGAAGGCGCCATCGTCGAGGCCTACTTGGCCGCTCTGGAACACCCGCG
CTTCGGGCCAACTTTGGCAAGGGGCAGGGAGGGCCAGCACAGCCTGGAAG
GTAGGAAGGAGGCAGCGGGAAGGGCTGCAACGAAATTTGCAGGGGTGACC
GCGGCAGCGGCAGCGGGGCCGGCGCCGGCGGCAGGAGTAGCAGCAACGGG
AGAGTCTGTCCGGGGCGGTGAAGAAGAGTCGTCGTCGACAGCCGCCGCCG
CCGCCGCCGCCGCCGGGGTGTCGATGTGGGAGGTGGCGGTGCACCACCTC
GCCTGCTACCTCTTCTCTCCTCCCCCCGATCCTACTCCTCCTGTTGCCGG
TGCCGATGCCGCAACCCCTTCCTGTCGTGTAGGCGTCAAGGAGAAGGAGG
AGAGGGAGGAGGAGAAGCTGCCATGGCAACCAGATTTCGGACGGCGCAAG
ACGTTCGAGCGGCTGCTGCAGCAGCAGCACGGAGACAAGCTCAGAGGGGG
AAGGGGGGCGACCGGCTCCGTGGCAGCGGCGGTGCTAGGTCACATGTGCC
GCGGATCAGCTCCCGGTGATGGTGCTTCTACTGGGGACAACGGAGGGCAA
GGAGGAGGAAGAGGGGGGGATGGCGGAGCAAGAGAAGTGTGCGCTTCGAC
GTCAAAGCTGGGGGCTACAAGGCGGGATTCGCTGCGGGCATACTACCGGG
AGAGCGGCCGCCCGGGCGGTGGTTCCGTCACCTCTGGTGTTGCCGGTATG
GCAGGTGACCGTGGCGCTGGGGGTGACAGCAGCAGCGACGGCGGGGACGA
TAACATCGTGGCGTGGTTAGACGAGGACAGAGAGATCAATGAAACCGTGG
AGCGTTTGGCACGCGCGACGTTGCGCGGTTGAATCTCGCGTGTCTGGAGC
CTGAGATCGCTTGCGCTGCCCGTTTCCGGCGGCTTTTGGACCATGTGTTG
TGTGGGGGCTTTGAGTGGCTCAAGTGTTTTGCCGGCCTCGCATTGTTCCG
AGAATGGGGGCGAAGCTTCCAGCGGTGACCGGGTGATTTGGTTTGGCTAC
TGTTTGCCACCTGCGTGCCTGCCTGGATCACTGACTGCCTTTCCTAGAAT
GCGCATTTCGTTGCATCCCGAAAATCGGTTTGTGGTTACGGTGATGGTGT
TAGTGTTGTGGTTGGTGGTGGCGGGGTTTTCTTTCGTTGCGGTTTCATGC
GGGGATGCCCACTGATTCCCGTCAACAAAAGTGGGCATTACATCCGCAAA
TATTCCAAAAATTCTGCGGGCGGAAGCAGTGCTACTGGTACAGGACACTT
CGAAACCGCTTTGGGGTCGTCTCGAAGTTGTGAGAGACAAGGAGAAGAAG
AGGTAGTGCAGGGATGGGAAAGGCAGAGTTTCCTTCCTTCCGTCTGTTTG
TTTACTGCCAAGCCGGATCAACGTTTGGCGGCGGCAAGAAATGGCGAATA
AATACACGTGGTCTAAGTAGACCATTGGGTAAAGGTTGGAAATCGGCCGG
ATAAAACCGACTGACTTGCGAAATTTTGGATAGAAATCAAAAATCAGAGA
ATCAAAAATAGAACATCCCCACGGAATAGGCGGGACTCTGTGGATCTGTG
GGATTCGGTCTTCTGCGTTTTTCCGCGCGGCGGGTCTTTCGCAGAGATTA
TATTTTGGTTGTTGGGGGAGAGACAAGGTTGTGAACTTGCCTCTTGGGAT
AATTGTGTAGAGAATCAGCCCGATCGCACACGTACTATGACAGCCACTCG
GTAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig2125:11219..16322+

>mRNA_L-elsbetiae_contig2125.6485.1 ID=mRNA_L-elsbetiae_contig2125.6485.1|Name=mRNA_L-elsbetiae_contig2125.6485.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4344bp|location=Sequence derived from alignment at L-elsbetiae_contig2125:11219..16322+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCAGCTACACGGTCCATGAGGAGACTTCGGCGCGCCGAGGCGGGGAC
GCGCTGGCTTGCCTGCCGGTTGATGGCGTGCGGCGGCGACGGGGCGCGGA
GTCCGTGGCCCTGGCCAGCGTTGAGGAGAGACTGTGCCCTACAGATGCCA
GCTACACGGTCCATGAGGAGACTTCGGCGCGCCGAGGCGGGGACGCGCTG
GCTTGCCTGCCGGTTGATGGCGTGCGGCGGCGACGGGGCGCGGAGTCCGT
GGCCCTGGCCAGCGTTGAGGAGAGACTGTGCCCTACAGGCGATGGCACTG
TGCCAGCAGGGGGACGAAGCGGTCGCCGTGGGGCTGCTGGGGGAGGCATT
GCCTGACGGCCCCGTCGAGAGTTGTGGTGTCGACGTTACCGCGACGGCGG
GGGCGAGGGCTGACGACGCCGATCCTGCCGCCGCTGCCGCAGGTGCTTCG
TCGCTCCTGCGCAAGGCGATGGCACTGTGCCAGCAGGGGGACGAAGCGGT
CGCCGTGGGGCTGCTGGGGGAGGCATTGCCTGACGGCCCCGTCGAGAGTT
GTGGTGTCGACGTTACCGCGACGGCGGGGGCGAGGGCTGACGACGCCGAT
CCTGCCGCCGCTGCCGCAGGTGCTTCGTCGCTCCTGCGCAAGCTGTTTCG
AGGGGCCATCAGCGACTCGGTGGCCCTGTCCCAGGCGTCTTTCCACCTGG
ACGGGCGGTGGGCGTCGCTGCAGAGCCTCGGGGCGTGCGCGCCTCCGGGG
GCGGCCTCTCTTCTCCCCCTCCCCCAGCACTGGCTGTTTCTTCCCCTGGC
CAGCCAGCTGTTTCGAGGGGCCATCAGCGACTCGGTGGCCCTGTCCCAGG
CGTCTTTCCACCTGGACGGGCGGTGGGCGTCGCTGCAGAGCCTCGGGGCG
TGCGCGCCTCCGGGGGCGGCCTCTCTTCTCCCCCTCCCCCAGCACTGGCT
GTTTCTTCCCCTGGCCAGCCAGGGCGGAGAGAAGGCCGCGTCCGCAGCGG
TTTCGGCTTGCCTCTCGTCGCTCGTCCGCCTCGAGGGGGAGAACAGCGCT
TACGTACGCGCCGGCGGGAGCGGCGACGGCGGCGGGAGCGGCGGGCGGGA
TGGAGGAGGCCGCAAAAGCCGCTTTGTTTCGCCCGAGGCGAAGCTGTACC
ACCTGGCCAACGCGTGCCTGTACGGCGCCTCCGTGCTGTCCGGGCCCGGC
GCGGAAGAGAACTTCGACTGGCTGTTCGGCAGGGCGGAGAGAAGGCCGCG
TCCGCAGCGGTTTCGGCTTGCCTCTCGTCGCTCGTCCGCCTCGAGGGGGA
GAACAGCGCTTACGTACGCGCCGGCGGGAGCGGCGACGGCGGCGGGAGCG
GCGGGCGGGATGGAGGAGGCCGCAAAAGCCGCTTTGTTTCGCCCGAGGCG
AAGCTGTACCACCTGGCCAACGCGTGCCTGTACGGCGCCTCCGTGCTGTC
CGGGCCCGGCGCGGAAGAGAACTTCGACTGGCTGTTCGGCAGGTACCTTG
GTCAATGCGGGGCAGGCTTTGAAGGCCGGCTTACAGACGTCGTTGCCCGC
TTGGCCCTCTCGTCCGCCCCGGACCCTGCTAAGATGATCGCCGATGCCGC
TGGTGCCGCCGCCGGTGCCGGTGCTGGTGCCGCCGGTACGGGCGGGGGCG
CAGAGGGTACCACAGCGCGAGACCGAGCCCGCGCGGCCCGCGCGCAGTCT
CACGCGGAGCGCGCGCTGCTGGAGCTGGTCAAGGATCTGGTGGGCAGCTT
CTTGGCGGACTCGTTCGGGCTCCCGAGCTTTGCCAGGGTGCTGAGGGTGT
TTGTGAGGACGGGCTTCCCGGCCGCCACTAGGCGGGTCGTGTGGAAAGAG
CTGGGCGACGTCGGTCTTCTGCACCTCCTAGATCCGCCCTCCGCTGCCGC
CGTTGCCGCCACCGCCGCCGCCGCTCCTTCTTCCTCTCCCCGCTCTTCTG
CCCCGGCCGTCTGCGACAACGGCAGCGACAACGGCGGTGGCGGCGGCAGC
TCTTGCGCGGACGATGTTTACCTCTACCCGGCCGACGTTGAAGGCGCCAT
CGTCGAGGCCTACTTGGCCGCTCTGGAACACCCGCGCTTCGGGCCAACTT
TGGCAAGGGGCAGGGAGGGCCAGCACAGCCTGGAAGGTAGGAAGGAGGCA
GCGGGAAGGGCTGCAACGAAATTTGCAGGGGTGACCGCGGCAGCGGCAGC
GGGGCCGGCGCCGGCGGCAGGAGTAGCAGCAACGGGAGAGTCTGTCCGGG
GCGGTGAAGAAGAGTCGTCGTCGACAGCCGCCGCCGCCGCCGCCGCCGCC
GGGGTGTCGATGTGGGAGGTGGCGGTGCACCACCTCGCCTGCTACCTCTT
CTCTCCTCCCCCCGATCCTACTCCTCCTGTTGCCGGTGCCGATGCCGCAA
CCCCTTCCTGTCGTGTAGGCGTCAAGGAGAAGGAGGAGAGGGAGGAGGAG
AAGCTGCCATGGCAACCAGATTTCGGACGGCGCAAGACGTTCGAGCGGCT
GCTGCAGCAGCAGCACGGAGACAAGCTCAGAGGGGGAAGGGGGGCGACCG
GCTCCGTGGCAGCGGCGGTGCTAGGTCACATGTGCCGCGGATCAGCTCCC
GGTGATGGTGCTTCTACTGGGGACAACGGAGGGCAAGGAGGAGGAAGAGG
GGGGGATGGCGGAGCAAGAGAAGTGTGCGCTTCGACGTCAAAGCTGGGGG
CTACAAGGCGGGATTCGCTGCGGGCATACTACCGGGAGAGCGGCCGCCCG
GGCGGTGGTTCCGTCACCTCTGGTGTTGCCGGTATGGCAGGTGACCGTGG
CGCTGGGGGTGACAGCAGCAGCGACGGCGGGGACGATAACATCGTGGCGT
GGTTAGACGAGGACAGAGAGATCAATGAAACCGTGGAGCGTTTGGCACGC
GCGACGTTGCGCGGTTGAGTACCTTGGTCAATGCGGGGCAGGCTTTGAAG
GCCGGCTTACAGACGTCGTTGCCCGCTTGGCCCTCTCGTCCGCCCCGGAC
CCTGCTAAGATGATCGCCGATGCCGCTGGTGCCGCCGCCGGTGCCGGTGC
TGGTGCCGCCGGTACGGGCGGGGGCGCAGAGGGTACCACAGCGCGAGACC
GAGCCCGCGCGGCCCGCGCGCAGTCTCACGCGGAGCGCGCGCTGCTGGAG
CTGGTCAAGGATCTGGTGGGCAGCTTCTTGGCGGACTCGTTCGGGCTCCC
GAGCTTTGCCAGGGTGCTGAGGGTGTTTGTGAGGACGGGCTTCCCGGCCG
CCACTAGGCGGGTCGTGTGGAAAGAGCTGGGCGACGTCGGTCTTCTGCAC
CTCCTAGATCCGCCCTCCGCTGCCGCCGTTGCCGCCACCGCCGCCGCCGC
TCCTTCTTCCTCTCCCCGCTCTTCTGCCCCGGCCGTCTGCGACAACGGCA
GCGACAACGGCGGTGGCGGCGGCAGCTCTTGCGCGGACGATGTTTACCTC
TACCCGGCCGACGTTGAAGGCGCCATCGTCGAGGCCTACTTGGCCGCTCT
GGAACACCCGCGCTTCGGGCCAACTTTGGCAAGGGGCAGGGAGGGCCAGC
ACAGCCTGGAAGGTAGGAAGGAGGCAGCGGGAAGGGCTGCAACGAAATTT
GCAGGGGTGACCGCGGCAGCGGCAGCGGGGCCGGCGCCGGCGGCAGGAGT
AGCAGCAACGGGAGAGTCTGTCCGGGGCGGTGAAGAAGAGTCGTCGTCGA
CAGCCGCCGCCGCCGCCGCCGCCGCCGGGGTGTCGATGTGGGAGGTGGCG
GTGCACCACCTCGCCTGCTACCTCTTCTCTCCTCCCCCCGATCCTACTCC
TCCTGTTGCCGGTGCCGATGCCGCAACCCCTTCCTGTCGTGTAGGCGTCA
AGGAGAAGGAGGAGAGGGAGGAGGAGAAGCTGCCATGGCAACCAGATTTC
GGACGGCGCAAGACGTTCGAGCGGCTGCTGCAGCAGCAGCACGGAGACAA
GCTCAGAGGGGGAAGGGGGGCGACCGGCTCCGTGGCAGCGGCGGTGCTAG
GTCACATGTGCCGCGGATCAGCTCCCGGTGATGGTGCTTCTACTGGGGAC
AACGGAGGGCAAGGAGGAGGAAGAGGGGGGGATGGCGGAGCAAGAGAAGT
GTGCGCTTCGACGTCAAAGCTGGGGGCTACAAGGCGGGATTCGCTGCGGG
CATACTACCGGGAGAGCGGCCGCCCGGGCGGTGGTTCCGTCACCTCTGGT
GTTGCCGGTATGGCAGGTGACCGTGGCGCTGGGGGTGACAGCAGCAGCGA
CGGCGGGGACGATAACATCGTGGCGTGGTTAGACGAGGACAGAGAGATCA
ATGAAACCGTGGAGCGTTTGGCACGCGCGACGTTGCGCGGTTGA
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