prot_L-elsbetiae_contig2125.6485.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2125.6485.1
Unique Nameprot_L-elsbetiae_contig2125.6485.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length724
Homology
BLAST of mRNA_L-elsbetiae_contig2125.6485.1 vs. uniprot
Match: A0A6H5JML9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML9_9PHAE)

HSP 1 Score: 510 bits (1313), Expect = 2.200e-160
Identity = 390/756 (51.59%), Postives = 432/756 (57.14%), Query Frame = 0
Query:    2 PATRSMRRLRRAEAGTRWLACRLMAC--GGDGARSPWPWPALRRDCALQAMALCQQGDEAVAVGLLGEALPDGPVESCGVDVTATAGARADDADPAAAAAG---ASSLLRKLFRGAISDSVALSQASFHLDGRWASLQSLGACAPPGAASLLPLPQHWLFLPLASQGGEKAASAAVSACLSSLVRLEGENSAYVRAGGSGDGGGSXXRDGGGRKSRFVSPEAKLYHLANACLYGASVLSGPGAEENFDWLFGRYLGQCGAGFEGRLTDVVARLALSSAPDPAKMIADAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----ERALLELVKDLVGSFLADSFGLPSFARVLRVFVRTGFPAATRRVVWKELGDVGLLHLLDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCADDVYLYPADVEGAIVEAYLAALEHPRFGPTLARGRE----------GQHSLEGRKEAAGRAATKFAGVTAAAAAGPAPAAGVAATGESVRGGEXXXXXXXXXXXXXXGVSMWEVAVHHLACYLFSPPPDPTPPV------------AGADAATPSCRVGVKEKEEREEEKLPWQPDFGRRKTFERLLQQQHGDKLRGGRGAT-----GSVAAAVLGHMCRG-SAPGDGASTGDNXXXXXXXXXX-GGAR--EVCASTSKLGATRRDSLRAYYRESGRPGGGSVTSGVAGMAGDRGAGGDSSSDGGDDNIVAWLDEDREINETVERLA 717
            PAT  +RR+RRAEAG RWL CRL+A    G G    WPW ALRRDCALQAMALC++GDEA+AVGLL EALP   V+S      A  G+     DPAA       ++SLLR LFRGAISD VALSQ+SFHLDGRWASLQSL ACAPPG ASLLPLP HWLFLPL SQGG KAAS AVSACLS LV LE E S YV           XX       +    PE KLYHLANACLYGASVLSG GA +NFDWLF RYL QCGAGFEGRL +V+ARLAL+SAPDPAKMIADAA A XXXXXXXXXXXXXXXXXXXXXX              ERALLE VKDLV SFLADSFGLPSFARVLRVFVRTGFP A RRVVWKELGDVGLLHLLDPP                                        D  YLYP DV+G IVE YL ALEHPRFGP                 G+    GR E   R +                A   AATG +V  G                V+M E+AVHHLACYLF P P P                A A    P C          ++   PW+PDF RRK F+RLL ++H ++L  GRG       GSVAAAVLGH   G  +P   A+ G+            GGAR  E  A  S+LG  RR  L+AY R     G G  T  VAG                  ++V+WL+E+R + + VERLA
Sbjct:  749 PAT-FLRRVRRAEAGARWLGCRLLALVSRGVGRGGGWPWAALRRDCALQAMALCERGDEAIAVGLLAEALPGSTVDS-----PAENGSERPSDDPAAXXXXXXXSASLLRTLFRGAISDPVALSQSSFHLDGRWASLQSLKACAPPGTASLLPLPPHWLFLPLVSQGGGKAASMAVSACLSLLVELEREESTYVWG---------XXXXXXXXXTGCNPPEVKLYHLANACLYGASVLSGLGAVQNFDWLFSRYLEQCGAGFEGRLAEVIARLALASAPDPAKMIADAATAXXXXXXXXXXXXXXXXXXXXXXXARDRARAARRQSHAERALLEFVKDLVASFLADSFGLPSFARVLRVFVRTGFPVAARRVVWKELGDVGLLHLLDPPPAGATAPAPAAAVPSHDSVPAAHAINGGGCV--------TDQAYLYPPDVDGDIVEVYLTALEHPRFGPAAXXXXXXXXXXXXXXXGERRRHGRVEETERGSALS-------------ARAAAATGLAVEAGRDDLSPSAAAAGGW-AVTMREIAVHHLACYLFPPSPRPXXXXXXXXXXXXXXXXAPAAPCPPECCKD-------DQGDPPWRPDFARRKMFQRLL-REHRERLGRGRGEXXXXXXGSVAAAVLGHHGLGVDSPAVVAADGNRATEERPAIQWEGGARGREGRAWVSELGERRRTLLQAYCRAC--SGDGRRTVAVAGDXXXXXXXXXXXXXXXXVDVVSWLEEERHVEDVVERLA 1457          
BLAST of mRNA_L-elsbetiae_contig2125.6485.1 vs. uniprot
Match: D8LHI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHI7_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 3.820e-82
Identity = 171/255 (67.06%), Postives = 187/255 (73.33%), Query Frame = 0
Query:    2 PATRSMRRLRRAEAGTRWLACRLMA--CGGDGARSPWPWPALRRDCALQAMALCQQGDEAVAVGLLGEALPDGPVESCGVDVTATAGARADDADPAAAAAG----ASSLLRKLFRGAISDSVALSQASFHLDGRWASLQSLGACAPPGAASLLPLPQHWLFLPLASQGGEKAASAAVSACLSSLVRLEGENSAYVRAGGSGDGGGSXXRDGGGRKSRFVSPEAKLYHLANACLYGASVLSGPGAEENFDWLFGRY 250
            PAT  +RR+RRAEAG RWL CRL+A  C G G    WPW ALRRDCALQAMALC++GDEA+AVGLL EALP   V+S   +     G+     DPAAAA G    ++SLLR LFRGAISD VALSQ+SFHLDGRWASLQSL AC PPG ASLLPLP HWLFLPLASQGGEKAAS AVSACLS LV+LE E SAYV +GG   G G             VSPE KLYHLANACLYGASVLSG G  ++FDWLF RY
Sbjct: 1212 PAT-FLRRVRRAEAGARWLGCRLLALGCRGGGREGGWPWAALRRDCALQAMALCERGDEAIAVGLLAEALPGSTVDSPEEE-----GSERPSDDPAAAAVGTAAASTSLLRMLFRGAISDPVALSQSSFHLDGRWASLQSLKACTPPGTASLLPLPPHWLFLPLASQGGEKAASTAVSACLSLLVQLEREESAYVWSGGGXGGTGC------------VSPEVKLYHLANACLYGASVLSGLGVVQHFDWLFSRY 1448          
BLAST of mRNA_L-elsbetiae_contig2125.6485.1 vs. uniprot
Match: A0A835YNX8_9STRA (RPAP1_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNX8_9STRA)

HSP 1 Score: 104 bits (259), Expect = 3.420e-19
Identity = 98/319 (30.72%), Postives = 126/319 (39.50%), Query Frame = 0
Query:  105 LRKLFRGAISDSVALSQA-SFHLDGRWASLQSL----------GACAPPGAASLLPLPQHWLFLPLASQGGEKAASAAVSACLSSLVRLEGEN--SAYVRAGGSGDGGGSXXRDGGGRKSRFVSPEAKLYHLANACLYGASVLSGPGAEENFDWLFGRYLGQCGAGF----------------------------EGRLTDVVARLALSS-APDPAKMIADAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERALLELVKDLVGSFLADSFGLPSFARVLRVFVRTGFPAATRRVVWKELGDVGLLHLLDPP 381
            L  L+ G++ +   L+ + + H  G W SLQSL           A A    ASLLPLP HWL LPL S+G   AA  AVS CL  L+ ++     S Y+RA                     ++PE +LYHL  AC YG  VL+ P     F  L  R+  QC                                E R   VV RL+ S  AP   +    AA A                                    L   V DL+G+F+ DS G   FAR L + +R   P   R ++W+ELG +GLL LL PP
Sbjct:  881 LEALYCGSMCEVATLAHSRALHTGGAWHSLQSLTLRQRQHAVGAAAAAAEPASLLPLPPHWLLLPLTSRGSGAAAVRAVSQCLRLLLSVDESPALSTYMRA---------------------LAPELRLYHLMAACTYGQGVLADPAVAPPFRALLSRWAQQCFIDAAXXXXXXXXXXXXXXXXXXXXXXXXQCPEDRFVAVVERLSASRVAPQLQRSTPSAADAQQHP-------------------------------GLTAFVSDLLGAFVEDSCGDAGFARALLLLLRPRMPPLARALIWRELGALGLLPLLAPP 1147          
BLAST of mRNA_L-elsbetiae_contig2125.6485.1 vs. uniprot
Match: A0A484ECM7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECM7_BRELC)

HSP 1 Score: 57.8 bits (138), Expect = 8.410e-5
Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 0
Query:  321 ERALLELVKDLVGSFLADSFGLPSFARVLRVFVRTGFPAATRRVVWKELGDVGLLHLLDP 380
            ER LL  V+ L+  F A SFG   FA+ + +F+   FP   R +VWKEL +  LLHLL+P
Sbjct: 1070 ERQLLTFVEKLLAEFTATSFGNAPFAKCMTLFLTDDFPLEIRALVWKELQEAHLLHLLEP 1129          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2125.6485.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JML9_9PHAE2.200e-16051.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHI7_ECTSI3.820e-8267.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YNX8_9STRA3.420e-1930.72RPAP1_C domain-containing protein n=1 Tax=Tribonem... [more]
A0A484ECM7_BRELC8.410e-546.67Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2125contigL-elsbetiae_contig2125:11559..15450 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2125.6485.1mRNA_L-elsbetiae_contig2125.6485.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2125 11219..16322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2125.6485.1 ID=prot_L-elsbetiae_contig2125.6485.1|Name=mRNA_L-elsbetiae_contig2125.6485.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=724bp
MPATRSMRRLRRAEAGTRWLACRLMACGGDGARSPWPWPALRRDCALQAM
ALCQQGDEAVAVGLLGEALPDGPVESCGVDVTATAGARADDADPAAAAAG
ASSLLRKLFRGAISDSVALSQASFHLDGRWASLQSLGACAPPGAASLLPL
PQHWLFLPLASQGGEKAASAAVSACLSSLVRLEGENSAYVRAGGSGDGGG
SGGRDGGGRKSRFVSPEAKLYHLANACLYGASVLSGPGAEENFDWLFGRY
LGQCGAGFEGRLTDVVARLALSSAPDPAKMIADAAGAAAGAGAGAAGTGG
GAEGTTARDRARAARAQSHAERALLELVKDLVGSFLADSFGLPSFARVLR
VFVRTGFPAATRRVVWKELGDVGLLHLLDPPSAAAVAATAAAAPSSSPRS
SAPAVCDNGSDNGGGGGSSCADDVYLYPADVEGAIVEAYLAALEHPRFGP
TLARGREGQHSLEGRKEAAGRAATKFAGVTAAAAAGPAPAAGVAATGESV
RGGEEESSSTAAAAAAAAGVSMWEVAVHHLACYLFSPPPDPTPPVAGADA
ATPSCRVGVKEKEEREEEKLPWQPDFGRRKTFERLLQQQHGDKLRGGRGA
TGSVAAAVLGHMCRGSAPGDGASTGDNGGQGGGRGGDGGAREVCASTSKL
GATRRDSLRAYYRESGRPGGGSVTSGVAGMAGDRGAGGDSSSDGGDDNIV
AWLDEDREINETVERLARATLRG*
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