mRNA_L-elsbetiae_contig21245.6483.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21245.6483.1 vs. uniprot
Match: A0A6H5LJ37_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LJ37_9PHAE) HSP 1 Score: 309 bits (791), Expect = 8.490e-100 Identity = 152/160 (95.00%), Postives = 155/160 (96.88%), Query Frame = 1 Query: 4 MTGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKVFDWAQASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGREERLRMVNLYMKGYLLDPPGRAKVITVDGVE 483 + GPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKVFDWAQASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMV F LPGREERLRMVNLYMK YLLDPPG+AKVI VDG+E Sbjct: 359 LYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKVFDWAQASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVRFDLPGREERLRMVNLYMKNYLLDPPGKAKVIRVDGIE 518
BLAST of mRNA_L-elsbetiae_contig21245.6483.1 vs. uniprot
Match: A0A835YR91_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR91_9STRA) HSP 1 Score: 285 bits (728), Expect = 1.780e-90 Identity = 139/160 (86.88%), Postives = 148/160 (92.50%), Query Frame = 1 Query: 4 MTGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKVFDWAQASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGREERLRMVNLYMKGYLLDPPGRAKVITVDGVE 483 + GPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHK+FDWAQAS KGLLLFVDEADAFLRRR+TE ISEDLRNALNAFLYRTGE+TDKFMLVYASNQPEQFDWAVNDRIDEMVPF LPGR+ER+RM+NLYM +LL G+AK I V GVE Sbjct: 345 LYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQASNKGLLLFVDEADAFLRRRSTERISEDLRNALNAFLYRTGEATDKFMLVYASNQPEQFDWAVNDRIDEMVPFELPGRDERMRMINLYMNKFLLAKTGKAKTIVVQGVE 504
BLAST of mRNA_L-elsbetiae_contig21245.6483.1 vs. uniprot
Match: A0A7S2Y4I1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4I1_9STRA) HSP 1 Score: 261 bits (667), Expect = 4.960e-86 Identity = 130/160 (81.25%), Postives = 142/160 (88.75%), Query Frame = 1 Query: 10 GPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKVFDWAQASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGREERLRMVNLYMKGYLLDPPGRAK--VITVDGVE 483 GPPGTGKTLFAKGLA+HSGLEYAI+TGGD+APLGRDAVTE+HK+FDWA AS KGLLLFVDEADAFLRRR+ E ISEDLRNALNAFLYRTGE+T KFMLVYASNQP+QFDWA+NDRIDEMV F LPG EER RMV+LYMK YLLD AK ITV+ +E Sbjct: 1 GPPGTGKTLFAKGLAKHSGLEYAILTGGDVAPLGRDAVTEIHKLFDWANASNKGLLLFVDEADAFLRRRSVEHISEDLRNALNAFLYRTGEATGKFMLVYASNQPDQFDWAINDRIDEMVEFQLPGLEERKRMVSLYMKKYLLDQQDAAKGRAITVEDIE 160
BLAST of mRNA_L-elsbetiae_contig21245.6483.1 vs. uniprot
Match: A0A7S2WW12_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW12_9STRA) HSP 1 Score: 251 bits (641), Expect = 4.160e-82 Identity = 124/171 (72.51%), Postives = 143/171 (83.63%), Query Frame = 1 Query: 4 MTGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKVFDWAQASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGREERLRMVNLYMKGYLLDP--------PGRAKVITVDGVEVRN 492 + GPPGTGKTLFAKGLARHSGLEYAI+TGGD+APLGRDAVTE+HKVF+WA AS +GLLLF+DE+DAFLR+R+TE +SEDLRNALNAFLYRTGE T+KFMLVYASNQPEQFDWA+NDRIDEMV F LP +EER+RM+ LYM YL P K++ V+GVE N Sbjct: 11 LYGPPGTGKTLFAKGLARHSGLEYAILTGGDVAPLGRDAVTEIHKVFEWANASNRGLLLFIDESDAFLRKRSTEAMSEDLRNALNAFLYRTGEPTNKFMLVYASNQPEQFDWAINDRIDEMVEFALPSKEERVRMIQLYMDKYLYRSGEGGGFFSPASTKIL-VNGVEDSN 180
BLAST of mRNA_L-elsbetiae_contig21245.6483.1 vs. uniprot
Match: A0A7S2D4S5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D4S5_9STRA) HSP 1 Score: 253 bits (647), Expect = 1.730e-79 Identity = 123/163 (75.46%), Postives = 140/163 (85.89%), Query Frame = 1 Query: 4 MTGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKVFDWAQASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGREERLRMVNLYMKGYLLDPPGRAK-----VITVDG 477 + GPPGTGKT+FAKGLAR SGLEYAI+TGGD+APLGRDAVTE+HKVFDWA S+KGLLLF+DE+DAFLR+R+TE ISEDLRNALNAFLYRTGE TDKFMLVYASNQPEQFDWAVNDRIDEMV F LPG EER RM+++Y+ YL D G + V++ DG Sbjct: 277 LYGPPGTGKTMFAKGLARSSGLEYAILTGGDVAPLGRDAVTEIHKVFDWANTSKKGLLLFIDESDAFLRKRSTENISEDLRNALNAFLYRTGEPTDKFMLVYASNQPEQFDWAVNDRIDEMVEFDLPGLEERRRMIDMYLSKYLRDAEGSSSGAKKIVVSFDG 439
BLAST of mRNA_L-elsbetiae_contig21245.6483.1 vs. uniprot
Match: A0A7S3HKW4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKW4_9STRA) HSP 1 Score: 248 bits (634), Expect = 4.740e-79 Identity = 115/160 (71.88%), Postives = 140/160 (87.50%), Query Frame = 1 Query: 4 MTGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKVFDWAQASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGREERLRMVNLYMKGYLLDPPGRAKVITVDGVE 483 + GPPGTGKT+FAKGLAR GL YAIMTGGD+APLG+DAVTE+HK+FDWA + KG+L+FVDEADAFLR+R+TE ISED+RNALNAFLYRTGE++ KFM+VYASNQPEQFDWA+NDRID+MV F LP +ER+RM++ YM +LL PP +K ITV+GV+ Sbjct: 152 LHGPPGTGKTMFAKGLARECGLHYAIMTGGDVAPLGKDAVTEIHKLFDWANTTNKGVLIFVDEADAFLRKRSTERISEDMRNALNAFLYRTGEASYKFMIVYASNQPEQFDWAINDRIDDMVEFRLPSFDERVRMISQYMDSFLLHPPAGSKTITVEGVD 311
BLAST of mRNA_L-elsbetiae_contig21245.6483.1 vs. uniprot
Match: A0A4D9D134_9STRA (AAA domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D134_9STRA) HSP 1 Score: 253 bits (646), Expect = 1.840e-78 Identity = 119/160 (74.38%), Postives = 146/160 (91.25%), Query Frame = 1 Query: 4 MTGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKVFDWAQASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGREERLRMVNLYMKGYLLDPPG-RAKVITVDGV 480 + GPPGTGKTLFAKGLA +SGL+YAI+TGGD+APLG++AVTE+HKVFDWA +RKG+LLFVDEADAFLRRR+TE +SE+LRNALNAFLYRTGE++DKFM+V+ASNQPEQFDWA+NDRIDEMV F LPG EERL MV +Y++ Y+L+PP +A+ ITV+G+ Sbjct: 350 LHGPPGTGKTLFAKGLAANSGLDYAILTGGDVAPLGKEAVTEIHKVFDWAGTTRKGVLLFVDEADAFLRRRSTEHMSEELRNALNAFLYRTGEASDKFMVVFASNQPEQFDWAINDRIDEMVDFNLPGEEERLEMVTIYLEKYVLNPPSTKARPITVEGI 509
BLAST of mRNA_L-elsbetiae_contig21245.6483.1 vs. uniprot
Match: A0A7S2WET7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WET7_9STRA) HSP 1 Score: 240 bits (612), Expect = 3.690e-76 Identity = 113/160 (70.62%), Postives = 135/160 (84.38%), Query Frame = 1 Query: 4 MTGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKVFDWAQASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGREERLRMVNLYMKGYLLDPPGRAKVITVDGVE 483 + GPPGTGKTLFAK LA++SG+EYAI+TGGD+APLGRDAVTE+HKVF+WA SR+GLLLFVDE+DAFLR+R+T+ ISED+RNALNAFL+RTGE++DKFM+VYASNQPEQFDWA+NDRIDEMV F LPG EER RM+ YM L P + D V+ Sbjct: 115 LYGPPGTGKTLFAKALAKNSGMEYAILTGGDVAPLGRDAVTEIHKVFEWANTSRRGLLLFVDESDAFLRKRSTQYISEDMRNALNAFLFRTGEASDKFMIVYASNQPEQFDWAINDRIDEMVEFALPGFEERRRMIAYYMHSLLSSPTQATPITIADDVD 274
BLAST of mRNA_L-elsbetiae_contig21245.6483.1 vs. uniprot
Match: A0A836C9L2_9STRA (AAA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L2_9STRA) HSP 1 Score: 244 bits (624), Expect = 1.420e-75 Identity = 120/160 (75.00%), Postives = 139/160 (86.88%), Query Frame = 1 Query: 4 MTGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKVFDWAQASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGREERLRMVNLYMKGYLLDPPGRAKVITVDGVE 483 + GPPGTGKTLFAKGLA+ SG++YAIMTGGDIAPLGR+AV+EMHKVFDWAQ SR+G++LFVDEADAFLRRR+TE ISED+RNALNAFLYRTGE+TD+FM+VYASNQPEQFD A+NDRIDE+VPF LPG EER RM++ YM YLL+ I GVE Sbjct: 314 LYGPPGTGKTLFAKGLAQASGMDYAIMTGGDIAPLGREAVSEMHKVFDWAQTSRRGVVLFVDEADAFLRRRSTEVISEDMRNALNAFLYRTGEATDRFMVVYASNQPEQFDDAINDRIDELVPFDLPGVEERRRMLDSYMLKYLLEAHAARSGIAALGVE 473
BLAST of mRNA_L-elsbetiae_contig21245.6483.1 vs. uniprot
Match: A0A7S1G0B3_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G0B3_9STRA) HSP 1 Score: 243 bits (620), Expect = 9.400e-75 Identity = 120/160 (75.00%), Postives = 137/160 (85.62%), Query Frame = 1 Query: 4 MTGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKVFDWAQASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGREERLRMVNLYMKGYLLDPPGR-AKVITVDGV 480 + GPPGTGKTLFAKGLARHSGLEYAI+TGGDIAPLGRDAVTE+HK+FDWA+ SR+GLLLFVDEADAFL+ R T ISED RNALNAFLYRTG TDKFM+VYASNQP QFD AV DRIDEMV F LPG +ER RM+ +Y++ YLL+P GR AK +T + + Sbjct: 351 LHGPPGTGKTLFAKGLARHSGLEYAILTGGDIAPLGRDAVTELHKLFDWAKTSRRGLLLFVDEADAFLQSRETNQISEDQRNALNAFLYRTGTETDKFMMVYASNQPSQFDPAVTDRIDEMVEFDLPGSDERHRMIVMYIERYLLNPSGRWAKKVTTEDI 510 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21245.6483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21245.6483.1 >prot_L-elsbetiae_contig21245.6483.1 ID=prot_L-elsbetiae_contig21245.6483.1|Name=mRNA_L-elsbetiae_contig21245.6483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=168bp MTGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKVFDWAback to top mRNA from alignment at L-elsbetiae_contig21245:488..2144- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21245.6483.1 ID=mRNA_L-elsbetiae_contig21245.6483.1|Name=mRNA_L-elsbetiae_contig21245.6483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1657bp|location=Sequence derived from alignment at L-elsbetiae_contig21245:488..2144- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21245:488..2144- >mRNA_L-elsbetiae_contig21245.6483.1 ID=mRNA_L-elsbetiae_contig21245.6483.1|Name=mRNA_L-elsbetiae_contig21245.6483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1008bp|location=Sequence derived from alignment at L-elsbetiae_contig21245:488..2144- (Laminarionema elsbetiae ELsaHSoW15)back to top |