mRNA_L-elsbetiae_contig21194.6459.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21194.6459.1 vs. uniprot
Match: D7FMV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV4_ECTSI) HSP 1 Score: 144 bits (363), Expect = 9.510e-39 Identity = 76/162 (46.91%), Postives = 101/162 (62.35%), Query Frame = 1 Query: 1 VSKTVFSSKMRMVFIVGLEGTGHHLLIPVLKALCNSDGVECPSVCPIASALYRGLVDPVSAAAYQNGIERLRTEMGVLALVAERTNEDPPLYLAALNRPCR---VGAMSFPNFNGPNKPLQYVDLKVLATEAERAGIDLRMIYLGRSAKDVLVSTTEHRHFG 477 V K SS+MR+VF+VGLEGTGHH + VL+ +C D V CP +C +A LY L P S AY + +RLR EM LA E + + + + CR G MS+PNFNG K LQYVD +++A EAERAG+D+R +YL RSA D+L S + H ++G Sbjct: 99 VEKKAVSSRMRVVFLVGLEGTGHHYMADVLEDVCKKDKVRCPKLCVMAKVLYPELSLPKSRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGA-CRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSGHHNYG 259
BLAST of mRNA_L-elsbetiae_contig21194.6459.1 vs. uniprot
Match: D7FMV3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMV3_ECTSI) HSP 1 Score: 143 bits (361), Expect = 4.090e-38 Identity = 74/160 (46.25%), Postives = 97/160 (60.62%), Query Frame = 1 Query: 1 VSKTVFSSKMRMVFIVGLEGTGHHLLIPVLKALCNSDGVECPSVCPIASALYRGLVDPVSAAAYQNGIERLRTEMGVLALV-AERTNEDPPLYLAALNRPCRVGAMSFPNFNGPNKPLQYVDLKVLATEAERAGIDLRMIYLGRSAKDVLVSTTEHRHFG 477 V K SS++R++F+VGLEGTGHH + V C + V C + CPIA ALY L P + Y+ LR E+ LA AE E + + G MSFPNFNG +K LQYVD ++LA EAERAG+D+R +YL RSA+ +LVS T+H H+G Sbjct: 58 VEKKTVSSQLRVMFLVGLEGTGHHYFLNVFDDACTTAAVPCANACPIAKALYPSLATPSTKQDYERARRELRRELENLAAYPAEFMTEGQAAIAQFVTCRSKSGMMSFPNFNGNDKALQYVDFRLLAEEAERAGVDVRFVYLARSARSILVSDTQHNHYG 217
BLAST of mRNA_L-elsbetiae_contig21194.6459.1 vs. uniprot
Match: A0A6H5KIA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA1_9PHAE) HSP 1 Score: 109 bits (273), Expect = 1.890e-26 Identity = 59/134 (44.03%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 85 VLKALCNSDGVECPSVCPIASALYRGLVDPVSAAAYQNGIERLRTEMGVLALVAERTNEDPPLYLAALNRPCR---VGAMSFPNFNGPNKPLQYVDLKVLATEAERAGIDLRMIYLGRSAKDVLVSTTEHRHFG 477 VL+ +C D V CP +C +A LY L P S AY + +RLR EM LA E + + + + CR G MS+PNFNG K LQYVD +++A EAERAG+D+R +YL RSA D+L S + H ++G Sbjct: 4 VLEDVCKKDKVRCPKLCVMAKVLYPELSLPESRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGA-CRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSVHHNYG 136
BLAST of mRNA_L-elsbetiae_contig21194.6459.1 vs. uniprot
Match: A0A7S3PJR3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PJR3_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 7.870e-16 Identity = 53/170 (31.18%), Postives = 84/170 (49.41%), Query Frame = 1 Query: 7 KTVFSSKMRMVFIVGLEGTGHHLLIPVLKALCNSDGVEC-PSVCPI---ASALYRGLVDPVSAAA-YQNGIERLRTEMGVLALVAERTNEDPPLYLAALNRPC-------RVGAMSFPNFNGPNKPLQYVDLKVLATEAERAGIDLRMIYLGRSAKDVLVSTTEHRHFGQ 480 K FS ++R VF++GLEGTGHH+ +P+ N +C P + A + G+ + + +ER+ +++ ++ LN C VGAMS+PNF + D++++A E GID R++ + R A DVL+STT HRHFG+ Sbjct: 12 KRAFSDQLRFVFVMGLEGTGHHMWLPIWTDCQNKSNCDCAPQIEDFTFGADQMRSGMFGAFTGKREVEQYVERVISQLPSKLAEDQKARGSDQSVTYLLNTLCVKHKHYWSVGAMSYPNFMNGCRSWSNPDVRLMAEVFESLGIDFRVMVVVRDALDVLLSTTVHRHFGR 181
BLAST of mRNA_L-elsbetiae_contig21194.6459.1 vs. uniprot
Match: A0A7S0A0K6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A0K6_9DINO) HSP 1 Score: 81.6 bits (200), Expect = 3.120e-15 Identity = 62/178 (34.83%), Postives = 85/178 (47.75%), Query Frame = 1 Query: 7 KTVFSSKMRMVFIVGLEGTGHHLLIPVLKALCNSDGVECPSVCPIASALYRG------------LVDPVSA---------AAYQNGIERLRTEMGVLALVAERTNEDPPLYLAALNRPCRVGAMSFPNFNGPNKPLQYVDLKVLATEAERAGIDLRMIYLGRSAKDVLVSTTEHRHFG 477 K V ++ R++F+ GLEG+GHHL IP+LK + C + + L+ L P +A A + +G R E+ R N PL LA+L G MS+PNF G K Q D+++LA AE G+D R++ L R A VL STT HRHFG Sbjct: 101 KRVHGARWRLLFVAGLEGSGHHLWIPLLKRCVKAR--RCAADVELGRRLWTDRTRKGLWSFETKLYAPRAAKKWEYAPPGAKWLSGFRRAEGEVRTALRRLSRRNATSPL-LASLGG---CGMMSYPNFPGKLKMFQTPDVRLLAELAEDEGVDFRILVLHRPAAAVLRSTTIHRHFG 272
BLAST of mRNA_L-elsbetiae_contig21194.6459.1 vs. uniprot
Match: A0A6H5JH94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH94_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 4.570e-14 Identity = 56/163 (34.36%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 7 KTVFSSKMRMVFIVGLEGTGHHLLIPVLKALCNSDGVECP-------SVCPIASALYRGLVDPVSAAAYQNGIERLRTEMGVLALVAERTNEDPPLYLAALNRPCRVGAMSFPNFNGPNKPLQYVDLKVLATEAERAGIDLRMIYLGRSAKDVLVSTTEHRHF 474 KT S R+VF+ GLEGTGHH ++ +L D + P + + L G + N +E +R L N P L + PC S+P +GP K +QY+DL ++A AE AGID R++YL RSAK+V+++ T HR F Sbjct: 141 KTHVSDVFRLVFVAGLEGTGHHYVMWANASLFG-DNMNLPRRYGHGKEIYEYYAPLKMGQNVKQFTMSSHNAVENMRR------LAEWAANLSSPGALEFFSIPC-----SYPVNSGPLKVMQYMDLGMIAETAEGAGIDFRVLYLRRSAKEVVIANTVHRKF 291
BLAST of mRNA_L-elsbetiae_contig21194.6459.1 vs. uniprot
Match: F0Y634_AURAN (PPM-type phosphatase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y634_AURAN) HSP 1 Score: 75.9 bits (185), Expect = 5.620e-13 Identity = 59/167 (35.33%), Postives = 80/167 (47.90%), Query Frame = 1 Query: 1 VSKTVFSSKMRMVFIVGLEGTGHHLLIPVLKALCNSDGVECPSVCPIASALYRGLVDPVSAAAY--QNGIERLRTEMGVLALV-----AERTNEDPPLYLAALNRPCRV----GAMSFPNFNGPNKPLQYVDLKVLATEAERAGIDLRMIYLGRSAKDVLVSTTEHR 468 V KTV + R +FI GLEG+GHH L + A+C V C + L+ P Y Q + A + A R P LYL +N G MS+PNF P+K L + D++ LAT AE AG DLR++ + R A++ LVST+ HR Sbjct: 31 VKKTV-DAPARFLFIAGLEGSGHHSLSNMF-AMCVRRRVLCRHDRELGQLLHGNRSHPTGIFVYGRQAAADIAALRKRFFARLQHLRDAPRDRGAPVLYLLNVNADGATIPDAGMMSYPNFGPPDKVLHHPDMQTLATMAEAAGADLRVLVVLRGARETLVSTSVHR 195
BLAST of mRNA_L-elsbetiae_contig21194.6459.1 vs. uniprot
Match: A0A7S3PR25_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR25_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 6.060e-12 Identity = 60/171 (35.09%), Postives = 84/171 (49.12%), Query Frame = 1 Query: 7 KTVFSSKMRMVFIVGLEGTGHHLLIP-VLKALCNSD-GVECPS---VCPIASALY------RGLVDPVSAAAYQNGIERLRTEMGVLALVAERTNEDPPLYLAALNRPCRVGAM-SFPNFNGPNKPLQYVDLKVLATEAERAGIDLRMIYLGRSAKDVLVSTTEHRHFGQG 483 KTVFS K+R+VF VGLEGTGHHL V+K L N EC + A + +G ++ +++ G E M + L A L L G++ S+P F G K LQ+ D+ LA AE GID R++ L R A+++++S HRHF G Sbjct: 414 KTVFS-KLRLVFFVGLEGTGHHLWQGIVMKLLKNKQLNAECKLNDLIMHPAGGCWAPWNNGKGFFCSAASESFKTGYEMAADAM--MKLKASNATGTHMLNLVYRGWKGNCGSIASYPCFGGSEKNLQHPDVLKLAELAESIGIDFRVVLLQRKAEELVISDIWHRHFNIG 581
BLAST of mRNA_L-elsbetiae_contig21194.6459.1 vs. uniprot
Match: D7G1E6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E6_ECTSI) HSP 1 Score: 65.1 bits (157), Expect = 1.950e-10 Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 1 Query: 304 VGAMSFPNFNGPNKPLQYVDLKVLATEAERAGIDLRMIYLGRSAKDVLVSTTEHRHF 474 G +S+P NGP K QYVDL++LA AE G+DLR++Y+ RSAK++L++ T HR F Sbjct: 65 TGGISYPCGNGPQKVQQYVDLRLLAEAAEAEGVDLRVLYMKRSAKELLLADTVHRGF 121
BLAST of mRNA_L-elsbetiae_contig21194.6459.1 vs. uniprot
Match: A0A7S3LMY4_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LMY4_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 2.230e-8 Identity = 51/190 (26.84%), Postives = 85/190 (44.74%), Query Frame = 1 Query: 7 KTVFSSKMRMVFIVGLEGTGHHLLIPVLKALCNSDGVECPS-VCPI-----------ASALYRGLVDPVSAAAYQNGIER---LRTEMGVLALVAERTNEDPPLYLAALNRPCRVGA---------------------MSFPNFNGPNKPLQYVDLKVLATEAERAGIDLRMIYLGRSAKDVLVSTTEHR 468 K +S K R VFI+G+EGTGHH+ VL+ ECP+ CP+ A + Y+ + ++G+++ + T+ G+L + E +D + A + + +S+PNF G + Q D+++LA E G+D R++ L R A D+L+S HR Sbjct: 148 KQAYSDKTRFVFILGIEGTGHHMFHSVLR--------ECPTCTCPVGINGNADHGGFAVSSYKHDYGVFGSKEGKDGVKKHVNMFTD-GLLKSLEEYYKDDEGRFKATDTTTFFINSYKDEGETGRCTLWQDWSSYSEISYPNFGGRCRRWQIPDVRILAEMFESQGVDFRVVVLVRDALDLLISNAVHR 328 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21194.6459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21194.6459.1 >prot_L-elsbetiae_contig21194.6459.1 ID=prot_L-elsbetiae_contig21194.6459.1|Name=mRNA_L-elsbetiae_contig21194.6459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=153bp MRMVFIVGLEGTGHHLLIPVLKALCNSDGVECPSVCPIASALYRGLVDPVback to top mRNA from alignment at L-elsbetiae_contig21194:756..1241+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21194.6459.1 ID=mRNA_L-elsbetiae_contig21194.6459.1|Name=mRNA_L-elsbetiae_contig21194.6459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=486bp|location=Sequence derived from alignment at L-elsbetiae_contig21194:756..1241+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21194:756..1241+ >mRNA_L-elsbetiae_contig21194.6459.1 ID=mRNA_L-elsbetiae_contig21194.6459.1|Name=mRNA_L-elsbetiae_contig21194.6459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=918bp|location=Sequence derived from alignment at L-elsbetiae_contig21194:756..1241+ (Laminarionema elsbetiae ELsaHSoW15)back to top |