mRNA_L-elsbetiae_contig2114.6440.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2114.6440.1 vs. uniprot
Match: A0A6H5JS01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS01_9PHAE) HSP 1 Score: 108 bits (271), Expect = 1.540e-25 Identity = 65/125 (52.00%), Postives = 73/125 (58.40%), Query Frame = 3 Query: 42 AGQREGVGGXXXXXXEGKAAFTWKRSRKAEAAMR--------------------------------------DPACGYDFVREAGYSREDFLGRVEAYSSYSRQKLETRRGEDQYAAKLDKLECP 302 AGQR G G +A+FTWKRS+KAEAAMR DPACGYDFVREAGY+ E FLGRVEAY+SYSRQKLETRRGED YA+++DKLECP Sbjct: 434 AGQRGGGGE--------EASFTWKRSKKAEAAMRQVHNANGPRRGWKQCEIGENITRTLVKELHTTFPVAVRDPACGYDFVREAGYNTEGFLGRVEAYASYSRQKLETRRGEDLYASRVDKLECP 550
BLAST of mRNA_L-elsbetiae_contig2114.6440.1 vs. uniprot
Match: D8LEG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG4_ECTSI) HSP 1 Score: 101 bits (252), Expect = 3.120e-23 Identity = 47/57 (82.46%), Postives = 52/57 (91.23%), Query Frame = 3 Query: 135 AMRDPACGYDFVREAGYSREDFLGRVEAYSSYSRQKLETRRGEDQYAAKLDKLECPQ 305 A RDPACGYDFVREAGY+ E FLGRVEAY+SYSR KLETRRGED YA+++DKLECPQ Sbjct: 327 AFRDPACGYDFVREAGYNTEGFLGRVEAYASYSRHKLETRRGEDLYASRVDKLECPQ 383
BLAST of mRNA_L-elsbetiae_contig2114.6440.1 vs. uniprot
Match: A0A485L451_9STRA (Aste57867_15085 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L451_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 4.030e-10 Identity = 33/71 (46.48%), Postives = 49/71 (69.01%), Query Frame = 3 Query: 102 FTWKRSRKAEAAMRDPACGYDFV-REAG---YSREDFLGRVEAYSSYSRQKLETRRGEDQYAAKLDKLECP 302 F ++++ +EAAMR+PACGYDFV R+ G EDF+ R+EA + R++LET RGE+ Y + +K +CP Sbjct: 292 FYTRKTKASEAAMRNPACGYDFVSRQDGDETNQNEDFIARMEAAENNRRKRLETTRGEEAYNVRQNKKQCP 362
BLAST of mRNA_L-elsbetiae_contig2114.6440.1 vs. uniprot
Match: A0A024UBR1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBR1_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 5.010e-9 Identity = 32/72 (44.44%), Postives = 43/72 (59.72%), Query Frame = 3 Query: 102 FTWKRSRKAEAAMRDPACGYDFVREA-----GYSREDFLGRVEAYSSYSRQKLETRRGEDQYAAKLDKLECP 302 F K+++ + AAMR+PACGYDFV G + DFL R++ R+KLET RGE+ Y + K ECP Sbjct: 499 FYPKKTKASVAAMRNPACGYDFVHRGHDGDDGTAGNDFLNRMQVAEQNRRKKLETTRGEEAYMLRQSKKECP 570
BLAST of mRNA_L-elsbetiae_contig2114.6440.1 vs. uniprot
Match: W4FZ05_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZ05_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 1.290e-8 Identity = 33/78 (42.31%), Postives = 44/78 (56.41%), Query Frame = 3 Query: 102 FTWKRSRKAEAAMRDPACGYDFVREA-----------GYSREDFLGRVEAYSSYSRQKLETRRGEDQYAAKLDKLECP 302 F ++S+ + AAMR+PACGYDFV G S DFL R+E R+KL+T RGE+ Y + +K ECP Sbjct: 581 FYPQKSKASVAAMRNPACGYDFVHRGQADDDDDNEGHGSSGRDFLNRMEVAEQNRRKKLDTTRGEEAYMLRQNKKECP 658
BLAST of mRNA_L-elsbetiae_contig2114.6440.1 vs. uniprot
Match: A0A1V9ZFP4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZFP4_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 1.010e-7 Identity = 28/69 (40.58%), Postives = 46/69 (66.67%), Query Frame = 3 Query: 102 FTWKRSRKAEAAMRDPACGYDFVR--EAGYSREDFLGRVEAYSSYSRQKLETRRGEDQYAAKLDKLECP 302 F K++R AAM++PACGYDFV + + +DF+ R+EA S +++L+ RGE++Y+ + +K CP Sbjct: 175 FQPKKTRAQLAAMKNPACGYDFVNHFDEDEAADDFIARMEAAESNRQKRLQVTRGEEEYSLRQNKKLCP 243
BLAST of mRNA_L-elsbetiae_contig2114.6440.1 vs. uniprot
Match: A0A067CK62_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CK62_SAPPC) HSP 1 Score: 57.4 bits (137), Expect = 1.890e-7 Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 3 Query: 102 FTWKRSRKAEAAMRDPACGYDFVR---EAGYSREDFLGRVEAYSSYSRQKLETRRGEDQYAAKLDKLECP 302 F K++R AAM++PACGYDFV + +DF+ R+EA +++L+ RGE++Y+ + +K +CP Sbjct: 174 FQPKKTRSQLAAMKNPACGYDFVNHFEDEDAGPDDFIARMEAAEHNRQKRLQATRGEEEYSLRQNKKQCP 243
BLAST of mRNA_L-elsbetiae_contig2114.6440.1 vs. uniprot
Match: T0QJK2_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QJK2_SAPDV) HSP 1 Score: 57.4 bits (137), Expect = 1.930e-7 Identity = 27/69 (39.13%), Postives = 46/69 (66.67%), Query Frame = 3 Query: 102 FTWKRSRKAEAAMRDPACGYDFVR--EAGYSREDFLGRVEAYSSYSRQKLETRRGEDQYAAKLDKLECP 302 F K++R AAM++PACGYDFV + +DF+ R+EA +++L++ RGE++Y+ + +K +CP Sbjct: 193 FQPKKTRSQLAAMKNPACGYDFVNHFDDEDKADDFIARMEAAEHNRQKRLQSTRGEEEYSLRQNKKQCP 261
BLAST of mRNA_L-elsbetiae_contig2114.6440.1 vs. uniprot
Match: A0A024UD78_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UD78_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 2.830e-7 Identity = 28/69 (40.58%), Postives = 43/69 (62.32%), Query Frame = 3 Query: 102 FTWKRSRKAEAAMRDPACGYDFVREAGY--SREDFLGRVEAYSSYSRQKLETRRGEDQYAAKLDKLECP 302 F K++R + AM++PACGYDFV S DF+GR++A +++LE RGE+ Y + +K +CP Sbjct: 354 FRPKKTRASVRAMKNPACGYDFVTRTAETDSANDFIGRMDAAEQNRQKRLELIRGEEAYNVRQNKRQCP 422
BLAST of mRNA_L-elsbetiae_contig2114.6440.1 vs. uniprot
Match: A0A485L2C3_9STRA (Aste57867_15084 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2C3_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 4.020e-7 Identity = 29/71 (40.85%), Postives = 46/71 (64.79%), Query Frame = 3 Query: 102 FTWKRSRKAEAAMRDPACGYDFVR----EAGYSREDFLGRVEAYSSYSRQKLETRRGEDQYAAKLDKLECP 302 F K+++ + AAMR+PACGYDFV + S + FL R+EA R++++T RGE++Y + +K +CP Sbjct: 799 FYPKKTKASLAAMRNPACGYDFVNRNEDDDEGSAKGFLARMEAAEINRRKRIDTTRGEEEYNLRQNKKQCP 869 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2114.6440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2114.6440.1 >prot_L-elsbetiae_contig2114.6440.1 ID=prot_L-elsbetiae_contig2114.6440.1|Name=mRNA_L-elsbetiae_contig2114.6440.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=96bp MGRGKSAAGQREGVGGRGGIGGEGKAAFTWKRSRKAEAAMRDPACGYDFVback to top mRNA from alignment at L-elsbetiae_contig2114:8634..9262- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2114.6440.1 ID=mRNA_L-elsbetiae_contig2114.6440.1|Name=mRNA_L-elsbetiae_contig2114.6440.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=629bp|location=Sequence derived from alignment at L-elsbetiae_contig2114:8634..9262- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2114:8634..9262- >mRNA_L-elsbetiae_contig2114.6440.1 ID=mRNA_L-elsbetiae_contig2114.6440.1|Name=mRNA_L-elsbetiae_contig2114.6440.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=576bp|location=Sequence derived from alignment at L-elsbetiae_contig2114:8634..9262- (Laminarionema elsbetiae ELsaHSoW15)back to top |