mRNA_L-elsbetiae_contig21139.6438.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21139.6438.1 vs. uniprot
Match: A0A6H5L7Y5_9PHAE (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y5_9PHAE) HSP 1 Score: 116 bits (290), Expect = 1.010e-28 Identity = 54/63 (85.71%), Postives = 58/63 (92.06%), Query Frame = 1 Query: 1 EAREAFQRGGFSLVMNRLQRRWRGVSRVSLALEDVLGHPVNANLYMTPPESQGFEAHFDWMDG 189 EAR+AF RGGFS+V+NRLQRRWRGV R S ALEDVLG PVNANLYMTPP+SQGFEAHFDWMDG Sbjct: 114 EARKAFHRGGFSVVINRLQRRWRGVLRASRALEDVLGQPVNANLYMTPPQSQGFEAHFDWMDG 176
BLAST of mRNA_L-elsbetiae_contig21139.6438.1 vs. uniprot
Match: D7G4T0_ECTSI (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4T0_ECTSI) HSP 1 Score: 113 bits (283), Expect = 1.050e-27 Identity = 53/63 (84.13%), Postives = 57/63 (90.48%), Query Frame = 1 Query: 1 EAREAFQRGGFSLVMNRLQRRWRGVSRVSLALEDVLGHPVNANLYMTPPESQGFEAHFDWMDG 189 EAR+AF RGGFS+V+NRLQRRWRGV R S ALE VLG PVNANLYMTPP+SQGFEAHFDWMDG Sbjct: 160 EARKAFHRGGFSVVINRLQRRWRGVLRASRALEHVLGQPVNANLYMTPPQSQGFEAHFDWMDG 222
BLAST of mRNA_L-elsbetiae_contig21139.6438.1 vs. uniprot
Match: W7TVJ2_9STRA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVJ2_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.450e-11 Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 4 AREAFQRGGFSLVMNRLQRRWRGVSRVSLALEDVLGHPVNANLYMTPPESQGFEAHFDWMDG-----EGAQR 204 A AF RG +SLV+N ++ + G SR++LA E LG+ + N Y TPP SQ FEAHFDWMD EG++R Sbjct: 150 AHAAFSRG-YSLVINNIEDKLYGTSRLALAFEGELGYRTSINCYFTPPGSQAFEAHFDWMDAFILQVEGSKR 220
BLAST of mRNA_L-elsbetiae_contig21139.6438.1 vs. uniprot
Match: A0A7K3DMI3_9ACTN (Cupin (Fragment) n=1 Tax=Streptomyces sp. SID5785 TaxID=2690309 RepID=A0A7K3DMI3_9ACTN) HSP 1 Score: 63.9 bits (154), Expect = 2.630e-10 Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 1 Query: 28 GFSLVMNRLQRRWRGVSRVSLALEDVLGHPVNANLYMTPPESQGFEAHFDWMDG-----EGAQRVLV 213 G +LV+ LQR W V+ ++ AL LGHPV AN Y+TPP+++GF+AH+D D EGA+R +V Sbjct: 94 GATLVLQALQRTWEPVADLTAALGTELGHPVQANAYVTPPQNRGFDAHYDVHDVFVLQIEGAKRWIV 160
BLAST of mRNA_L-elsbetiae_contig21139.6438.1 vs. uniprot
Match: A0A7S0VDM9_9CRYP (Bifunctional lysine-specific demethylase and histidyl-hydroxylase (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VDM9_9CRYP) HSP 1 Score: 63.5 bits (153), Expect = 2.790e-10 Identity = 32/60 (53.33%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 7 REAFQRGGFSLVMNRLQRRWRGVSRVSLALEDVLGHPVNANLYMTPPESQGFEAHFDWMD 186 RE GF+LV+N L R RGV+R++ +LE G V ANLY+TPP SQGFE H+D M+ Sbjct: 138 RELVHEKGFTLVLNHLDMRVRGVARLARSLEKQTGLAVQANLYLTPPGSQGFEVHWDPME 197
BLAST of mRNA_L-elsbetiae_contig21139.6438.1 vs. uniprot
Match: A0A367EX44_9ACTN (Cupin n=1 Tax=Streptomyces reniochalinae TaxID=2250578 RepID=A0A367EX44_9ACTN) HSP 1 Score: 63.2 bits (152), Expect = 5.940e-10 Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 1 Query: 28 GFSLVMNRLQRRWRGVSRVSLALEDVLGHPVNANLYMTPPESQGFEAHFDWMDG-----EGAQRVLV 213 G +LV+ LQR W V+ S L LGHPV AN Y+TPP+S+GF+AH+D D EG +R LV Sbjct: 109 GATLVLQALQRTWEPVADFSSGLSAELGHPVQANAYVTPPQSRGFDAHYDVHDVFIVQIEGTKRWLV 175
BLAST of mRNA_L-elsbetiae_contig21139.6438.1 vs. uniprot
Match: A0A6I5D8P1_9ACTN (Cupin (Fragment) n=1 Tax=Streptomyces sp. SID4982 TaxID=2690291 RepID=A0A6I5D8P1_9ACTN) HSP 1 Score: 62.4 bits (150), Expect = 5.980e-10 Identity = 32/67 (47.76%), Postives = 42/67 (62.69%), Query Frame = 1 Query: 28 GFSLVMNRLQRRWRGVSRVSLALEDVLGHPVNANLYMTPPESQGFEAHFDWMDG-----EGAQRVLV 213 G +LV+ LQR W V + L LGHPV AN Y+TPP+SQGF+AH+D D +G++R LV Sbjct: 113 GATLVLQALQRTWAPVGDLCAGLSAELGHPVQANAYVTPPQSQGFDAHYDVHDVFVVQIQGSKRWLV 179
BLAST of mRNA_L-elsbetiae_contig21139.6438.1 vs. uniprot
Match: A0A4Q7Z5K4_9ACTN (Ribosomal protein L16 Arg81 hydroxylase n=8 Tax=Streptomyces TaxID=1883 RepID=A0A4Q7Z5K4_9ACTN) HSP 1 Score: 62.8 bits (151), Expect = 8.150e-10 Identity = 32/67 (47.76%), Postives = 42/67 (62.69%), Query Frame = 1 Query: 28 GFSLVMNRLQRRWRGVSRVSLALEDVLGHPVNANLYMTPPESQGFEAHFDWMDG-----EGAQRVLV 213 G +LV+ LQR W V + AL LGHPV AN Y+TPP+SQGF+ H+D D +G++R LV Sbjct: 112 GATLVLQALQRTWAPVGELCAALSTELGHPVQANAYITPPQSQGFDDHYDVHDVFVVQIQGSKRWLV 178
BLAST of mRNA_L-elsbetiae_contig21139.6438.1 vs. uniprot
Match: UPI001FFDB8FA (cupin domain-containing protein n=1 Tax=Sphingomonas sp. S2M10 TaxID=2705010 RepID=UPI001FFDB8FA) HSP 1 Score: 62.4 bits (150), Expect = 1.090e-9 Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 1 Query: 28 GFSLVMNRLQRRWRGVSRVSLALEDVLGHPVNANLYMTPPESQGFEAHFDWMD 186 G+S+V+N + R W V+R AL L HPV+ANLY+TPP++QGF+ H+D MD Sbjct: 85 GYSIVLNDVARFWEPVTRYCAALCADLHHPVDANLYLTPPDTQGFDPHYDIMD 137
BLAST of mRNA_L-elsbetiae_contig21139.6438.1 vs. uniprot
Match: A0A2T7JYA2_9ACTN (Cupin n=6 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A2T7JYA2_9ACTN) HSP 1 Score: 62.4 bits (150), Expect = 1.120e-9 Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 1 Query: 28 GFSLVMNRLQRRWRGVSRVSLALEDVLGHPVNANLYMTPPESQGFEAHFDWMDG-----EGAQRVLV 213 G +LV+ LQR W V+ ++ L LGHPV AN Y+TPP+++GF+AH+D D EG +R LV Sbjct: 113 GATLVLQALQRTWEPVAELTARLSAELGHPVQANAYVTPPQNRGFDAHYDVHDVFVLQIEGTKRWLV 179 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21139.6438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21139.6438.1 >prot_L-elsbetiae_contig21139.6438.1 ID=prot_L-elsbetiae_contig21139.6438.1|Name=mRNA_L-elsbetiae_contig21139.6438.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=72bp EAREAFQRGGFSLVMNRLQRRWRGVSRVSLALEDVLGHPVNANLYMTPPEback to top mRNA from alignment at L-elsbetiae_contig21139:162..377- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21139.6438.1 ID=mRNA_L-elsbetiae_contig21139.6438.1|Name=mRNA_L-elsbetiae_contig21139.6438.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=216bp|location=Sequence derived from alignment at L-elsbetiae_contig21139:162..377- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21139:162..377- >mRNA_L-elsbetiae_contig21139.6438.1 ID=mRNA_L-elsbetiae_contig21139.6438.1|Name=mRNA_L-elsbetiae_contig21139.6438.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=432bp|location=Sequence derived from alignment at L-elsbetiae_contig21139:162..377- (Laminarionema elsbetiae ELsaHSoW15)back to top |