mRNA_L-elsbetiae_contig210.6362.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig210.6362.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE) HSP 1 Score: 141 bits (355), Expect = 1.290e-37 Identity = 67/103 (65.05%), Postives = 71/103 (68.93%), Query Frame = 2 Query: 5 DCMVVIFEGEDLDVTGDWNTYSDPLASGGEYIVWEGLSAGANNRDWQDGDIIRTTVEITVPGTYRFKWRMRQASDVESDKANDSWLTFPNAARFGPLDDDTNY 313 DCMVVI E EDL V GDW D ASGG YI WEGLS NNRD DGDII T+V+I GTY FKW MRQ VESDKANDSWL FP+A RFGP D +Y Sbjct: 311 DCMVVIIEAEDLPVNGDWRIVQDNAASGGAYITWEGLSEAQNNRDPGDGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPADTSKSY 413
BLAST of mRNA_L-elsbetiae_contig210.6362.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI) HSP 1 Score: 136 bits (343), Expect = 4.250e-35 Identity = 65/103 (63.11%), Postives = 69/103 (66.99%), Query Frame = 2 Query: 5 DCMVVIFEGEDLDVTGDWNTYSDPLASGGEYIVWEGLSAGANNRDWQDGDIIRTTVEITVPGTYRFKWRMRQASDVESDKANDSWLTFPNAARFGPLDDDTNY 313 DCMVVI E EDL V GDW D ASGG YI WEGLS NN D DGDII T+V+I GTY FKW MRQ VESDKANDSWL FP+A RFGP +Y Sbjct: 730 DCMVVIIEAEDLPVNGDWRIVQDNAASGGAYITWEGLSEAQNNSDPADGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPAGTSKSY 832
BLAST of mRNA_L-elsbetiae_contig210.6362.1 vs. uniprot
Match: UPI00036FD2D7 (Ig-like domain-containing protein n=1 Tax=Flexithrix dorotheae TaxID=70993 RepID=UPI00036FD2D7) HSP 1 Score: 59.3 bits (142), Expect = 5.960e-8 Identity = 34/96 (35.42%), Postives = 46/96 (47.92%), Query Frame = 2 Query: 14 VVIFEGEDLDVTGDWNTYSDPLASGGE-YIVWEGLSAGANNRDWQDGDIIRTTVEITVPGTYRFKWRMRQASDVESDKANDSWLTFPNAARFGPLD 298 ++I EGE+ +TGDW SD G+ YI W+ G N D DI+ + I GTY+F+W R A + ND+W NA F D Sbjct: 1017 LLIIEGEEATLTGDWKFKSDLSGYTGQGYIEWD----GPNYFDKPVSDILTFNITINKTGTYKFQWHSRIAKGNLPSENNDTWFKVENAKMFAEED 1108
BLAST of mRNA_L-elsbetiae_contig210.6362.1 vs. uniprot
Match: A0A150AHK4_9BACT (Por_Secre_tail domain-containing protein n=2 Tax=Flammeovirga sp. SJP92 TaxID=1775430 RepID=A0A150AHK4_9BACT) HSP 1 Score: 58.9 bits (141), Expect = 7.920e-8 Identity = 34/95 (35.79%), Postives = 53/95 (55.79%), Query Frame = 2 Query: 14 VVIFEGEDLDVTGDWNTYSDP-LASGGEYIVWEGLSAGANNRDWQD-GDIIRTTVEITVPGTYRFKWRMRQASDVE--------SDKANDSWLTF 268 V++FE E + + GDW +D ASGG+YI ++ G NN + Q+ + + + +I PGTY FKW +RQ + +D +ND+WL F Sbjct: 331 VMVFEAERIPLRGDWKLGTDSEYASGGKYIYYD----GPNNYNAQNPANTLTYSFKINTPGTYTFKWFVRQNEEERGKVDGQQGTDLSNDAWLRF 421
BLAST of mRNA_L-elsbetiae_contig210.6362.1 vs. uniprot
Match: UPI0009F81ED3 (T9SS type A sorting domain-containing protein n=1 Tax=Saccharicrinis aurantiacus TaxID=1849719 RepID=UPI0009F81ED3) HSP 1 Score: 58.9 bits (141), Expect = 7.960e-8 Identity = 36/110 (32.73%), Postives = 61/110 (55.45%), Query Frame = 2 Query: 14 VVIFEGEDLDVTGDWNTYSDPL-ASGGEYIVWEGLSAGANNRDWQD-GDIIRTTVEITVPGTYRFKWRMRQASD----VE----SDKANDSWLTFPNAARFGPLDDDTNY 313 +++FE E +++ GDW +D ASGG+YI ++ G NN Q+ + + + +I PGTY FKW +RQ + VE +D +ND+W+ F + + D T++ Sbjct: 339 LLVFEAERIELKGDWKLGTDDANASGGKYIYYD----GPNNYQAQNPANTLSYSFDINTPGTYTFKWFVRQNEEERGKVEGQQGTDLSNDAWIKFSDGIGYFGEDQVTDF 444
BLAST of mRNA_L-elsbetiae_contig210.6362.1 vs. uniprot
Match: UPI0002559DEE (Ig-like domain-containing protein n=1 Tax=Ochrovirga pacifica TaxID=1042376 RepID=UPI0002559DEE) HSP 1 Score: 56.6 bits (135), Expect = 5.150e-7 Identity = 34/88 (38.64%), Postives = 47/88 (53.41%), Query Frame = 2 Query: 14 VVIFEGEDLDVTGDWNTYSDPL-ASGGEYIVWEGLSA-GANNRDWQDGDIIRTTVEITVPGTYRFKWRMRQASDVE-SDKANDSWLTF 268 +++FE E ++ G W +D ASGG+YI ++G ++ G N I T +I PGTY FKW MRQ SD ND+W F Sbjct: 463 LLVFEAERFELKGAWKLGTDAAKASGGKYIYYDGANSYGTVNPSHN----ISYTFKINNPGTYTFKWMMRQPEGERGSDLGNDAWFYF 546
BLAST of mRNA_L-elsbetiae_contig210.6362.1 vs. uniprot
Match: UPI0009E46A51 (T9SS type A sorting domain-containing protein n=2 Tax=unclassified Flammeovirga TaxID=2637820 RepID=UPI0009E46A51) HSP 1 Score: 53.5 bits (127), Expect = 6.170e-6 Identity = 32/95 (33.68%), Postives = 52/95 (54.74%), Query Frame = 2 Query: 14 VVIFEGEDLDVTGDWNTYSDP-LASGGEYIVWEGLSAGANNRDWQD-GDIIRTTVEITVPGTYRFKWRMRQASDVE--------SDKANDSWLTF 268 +++FE E + + G W +D ASGG+YI ++ G N+ + Q+ + I + +I PGTY FKW +RQ + +D +ND+WL F Sbjct: 337 LMVFEAERIPLKGAWKLGTDEQYASGGKYIYYD----GPNSYNAQNPANTITYSFKINTPGTYTFKWFVRQNEEERGKVDGQQGTDLSNDAWLRF 427
BLAST of mRNA_L-elsbetiae_contig210.6362.1 vs. uniprot
Match: A0A3D9L0M2_MARFU (Putative secreted protein (Por secretion system target) n=1 Tax=Marinoscillum furvescens DSM 4134 TaxID=1122208 RepID=A0A3D9L0M2_MARFU) HSP 1 Score: 53.1 bits (126), Expect = 8.490e-6 Identity = 31/94 (32.98%), Postives = 54/94 (57.45%), Query Frame = 2 Query: 14 VVIFEGEDLDVTGDWNTYSDPL-ASGGEYIVWEGLSAGANNRDWQDGDIIRTTVEITVPGTYRFKWRMRQASD----VE----SDKANDSWLTF 268 +++FE E + + GDW +D ASGG+YI ++G + N ++ + + + +I PG+Y FKW +RQ + VE +D +ND+W+ F Sbjct: 338 LLVFEAERIALKGDWKLGTDEEHASGGKYIYYDGPN---NYQNQAAKNTLSYSFKINTPGSYTFKWFVRQNEEERGKVEGKQGTDLSNDAWIRF 428
BLAST of mRNA_L-elsbetiae_contig210.6362.1 vs. uniprot
Match: A0A7X9RWX1_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Flammeovirga aprica JL-4 TaxID=694437 RepID=A0A7X9RWX1_9BACT) HSP 1 Score: 50.8 bits (120), Expect = 5.450e-5 Identity = 30/95 (31.58%), Postives = 52/95 (54.74%), Query Frame = 2 Query: 14 VVIFEGEDLDVTGDWNTYSDP-LASGGEYIVWEGLSAGANNRDWQDG-DIIRTTVEITVPGTYRFKWRMRQASDVE--------SDKANDSWLTF 268 +++FE E + + G W +D ASGG+YI ++ G N+ + Q+ + + + +I PGTY FKW +RQ + +D +ND+W+ F Sbjct: 337 LMVFEAERIPLKGAWKLGTDDQYASGGKYIYYD----GPNSYNTQNAVNTLTYSFKINNPGTYTFKWFVRQNEEERGKVDGQQGTDLSNDAWVRF 427 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig210.6362.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig210.6362.1 >prot_L-elsbetiae_contig210.6362.1 ID=prot_L-elsbetiae_contig210.6362.1|Name=mRNA_L-elsbetiae_contig210.6362.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=106bp MVVIFEGEDLDVTGDWNTYSDPLASGGEYIVWEGLSAGANNRDWQDGDIIback to top mRNA from alignment at L-elsbetiae_contig210:30823..31150+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig210.6362.1 ID=mRNA_L-elsbetiae_contig210.6362.1|Name=mRNA_L-elsbetiae_contig210.6362.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=328bp|location=Sequence derived from alignment at L-elsbetiae_contig210:30823..31150+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig210:30823..31150+ >mRNA_L-elsbetiae_contig210.6362.1 ID=mRNA_L-elsbetiae_contig210.6362.1|Name=mRNA_L-elsbetiae_contig210.6362.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=636bp|location=Sequence derived from alignment at L-elsbetiae_contig210:30823..31150+ (Laminarionema elsbetiae ELsaHSoW15)back to top |