mRNA_L-elsbetiae_contig20740.6255.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig20740.6255.1 vs. uniprot
Match: D7FJP3_ECTSI (Ubiquitin fusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP3_ECTSI) HSP 1 Score: 173 bits (438), Expect = 1.650e-54 Identity = 80/95 (84.21%), Postives = 86/95 (90.53%), Query Frame = 1 Query: 1 MRERCDMVTYWLPQLESSPFNAIYFVSVERYEKTARLTIVPAPDVTIRVFMAFRGVDGYDAELDTAEVEELRAPARKGFVAVEWGGMNLNGASHD 285 MRERCDMVTYWLPQLESS FN IYFV+VERYEK ARLTI PAPDVTIR+FMAFRG+D YD ELDTA++E+LRAP RKGFVAVEWGGMNLN SHD Sbjct: 1 MRERCDMVTYWLPQLESSAFNVIYFVNVERYEKAARLTIEPAPDVTIRIFMAFRGIDAYDKELDTAKMEDLRAPGRKGFVAVEWGGMNLNRVSHD 95
BLAST of mRNA_L-elsbetiae_contig20740.6255.1 vs. uniprot
Match: D7G4B4_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B4_ECTSI) HSP 1 Score: 169 bits (427), Expect = 1.260e-48 Identity = 79/95 (83.16%), Postives = 85/95 (89.47%), Query Frame = 1 Query: 1 MRERCDMVTYWLPQLESSPFNAIYFVSVERYEKTARLTIVPAPDVTIRVFMAFRGVDGYDAELDTAEVEELRAPARKGFVAVEWGGMNLNGASHD 285 +RERCDMVT WLPQLESS FN IYFV VERYE+ ARLTIVP PDVTIRVFMAFRG YDAELDTA++EELR+PAR+GFVAVEWGGMNLNG SHD Sbjct: 359 VRERCDMVTCWLPQLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFRGAHAYDAELDTAKIEELRSPAREGFVAVEWGGMNLNGVSHD 453
BLAST of mRNA_L-elsbetiae_contig20740.6255.1 vs. uniprot
Match: A0A174QBY5_FLAPL (Uncharacterized protein n=1 Tax=Flavonifractor plautii TaxID=292800 RepID=A0A174QBY5_FLAPL) HSP 1 Score: 82.0 bits (201), Expect = 7.410e-18 Identity = 42/88 (47.73%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 4 RERCDMVTYWLPQLESSPFNAIYFVSVERYEKTARLTIVPAPDVTIRVFMAFRGVDGYDAELDTAEVEELRAPARKGFVAVEWGGMNL 267 RE + + YWLP+LE +P+N + F E Y +A LTI PAPD IRVF+A++G+D A ++ E ++L AP R GF AVEWGG + Sbjct: 60 READEFIIYWLPKLEGNPYNLLSF-QTEAYTSSAVLTIDPAPDTLIRVFLAWKGLD---APVEV-EPQKLTAPERAGFTAVEWGGAEV 142
BLAST of mRNA_L-elsbetiae_contig20740.6255.1 vs. uniprot
Match: A0A096CD36_FLAPL (Uncharacterized protein n=14 Tax=Eubacteriales TaxID=186802 RepID=A0A096CD36_FLAPL) HSP 1 Score: 83.2 bits (204), Expect = 1.170e-17 Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 4 RERCDMVTYWLPQLESSPFNAIYFVSVERYEKTARLTIVPAPDVTIRVFMAFRGVDGYDAELDTAEVEELRAPARKGFVAVEWGGMNL 267 RE + + YWLP+LE +P+N + F E Y +A LTI PAPD IRVF+A++G+D E+ E + L APAR GF AVEWGG + Sbjct: 127 READEFIIYWLPKLEGNPYNLLSF-QTEAYTSSAVLTIDPAPDTLIRVFLAWKGLDA-PVEI---EPQTLTAPARTGFTAVEWGGAEV 209
BLAST of mRNA_L-elsbetiae_contig20740.6255.1 vs. uniprot
Match: A0A1Q6RH43_9FIRM (Uncharacterized protein n=3 Tax=Oscillospiraceae TaxID=216572 RepID=A0A1Q6RH43_9FIRM) HSP 1 Score: 82.4 bits (202), Expect = 2.060e-17 Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 4 RERCDMVTYWLPQLESSPFNAIYFVSVERYEKTARLTIVPAPDVTIRVFMAFRGVDGYDAELDTAEVEELRAPARKGFVAVEWGGMNL 267 RE + + YWLPQ++ +P+N I F S +RY + A+LTI PAPD +RVFMA++ +D + E+ + L AP R GF AVEWGG + Sbjct: 122 REANEFIVYWLPQMQENPYNLIAFQS-DRYTQAAKLTIDPAPDTLLRVFMAWKPLDKF-MEIPA---QSLTAPERTGFTAVEWGGCRV 204
BLAST of mRNA_L-elsbetiae_contig20740.6255.1 vs. uniprot
Match: A0A1Y4S5T9_9FIRM (Uncharacterized protein n=2 Tax=unclassified Flavonifractor TaxID=2629267 RepID=A0A1Y4S5T9_9FIRM) HSP 1 Score: 81.3 bits (199), Expect = 6.440e-17 Identity = 44/90 (48.89%), Postives = 55/90 (61.11%), Query Frame = 1 Query: 4 RERCDMVTYWLPQLESSPFNAIYFVSVERYEKTARLTIVPAPDVTIRVFMAFRGVDGYDAELDTAEV--EELRAPARKGFVAVEWGGMNL 267 RE + + YWLP+LE +P+N I F Y A LTI PAPD IRVFMA+RG++ + EV + L APAR GF AVEWGG + Sbjct: 128 REANEFIIYWLPRLEENPYNLISF-QTSAYTDGAELTIDPAPDTLIRVFMAWRGLE------EPVEVVPQTLTAPARTGFTAVEWGGAEV 210
BLAST of mRNA_L-elsbetiae_contig20740.6255.1 vs. uniprot
Match: UPI001F47E5A1 (hypothetical protein n=1 Tax=Pseudoflavonifractor phocaeensis TaxID=1870988 RepID=UPI001F47E5A1) HSP 1 Score: 80.9 bits (198), Expect = 7.920e-17 Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = 1 Query: 4 RERCDMVTYWLPQLESSPFNAIYFVSVERYEKTARLTIVPAPDVTIRVFMAFRGVDGYDAELDTAEVEE--LRAPARKGFVAVEWGGMNL 267 RE + + YWLPQLES+P+N I F E Y ARL++ PAPD+ +RVFMA++ ++ EVE L AP R GF VEWGG + Sbjct: 121 REANEFIVYWLPQLESNPYNLISFQG-EAYTSHARLSVTPAPDILLRVFMAWKPLES------PVEVEPQVLTAPERSGFTVVEWGGSKV 203
BLAST of mRNA_L-elsbetiae_contig20740.6255.1 vs. uniprot
Match: A0A1Y4WJV0_9FIRM (Uncharacterized protein n=1 Tax=Flavonifractor sp. An10 TaxID=1965537 RepID=A0A1Y4WJV0_9FIRM) HSP 1 Score: 80.9 bits (198), Expect = 8.070e-17 Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 1 Query: 4 RERCDMVTYWLPQLESSPFNAIYFVSVERYEKTARLTIVPAPDVTIRVFMAFRGVDGYDAELDTAEVEELRAPARKGFVAVEWGGMNL 267 RE + + YWLP++E +P+N I F + Y A LTI P+PD IRVFM ++G++ E+ +EL APAR GF AVEWGG L Sbjct: 121 REANEFIIYWLPRMEGNPYNLISF-QTDAYTDAAELTIDPSPDTLIRVFMTWKGLE-QPVEIPA---QELTAPARTGFTAVEWGGAEL 203
BLAST of mRNA_L-elsbetiae_contig20740.6255.1 vs. uniprot
Match: UPI001FD7C1C3 (hypothetical protein n=1 Tax=Flavonifractor sp. AGMB03687 TaxID=2785133 RepID=UPI001FD7C1C3) HSP 1 Score: 80.9 bits (198), Expect = 8.230e-17 Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 1 Query: 4 RERCDMVTYWLPQLESSPFNAIYFVSVERYEKTARLTIVPAPDVTIRVFMAFRGVDGYDAELDTAEVEELRAPARKGFVAVEWGGMNL 267 +E + + YWLP++E +P+N I F E Y +A LTI PAPD IRVFMA++G+D + E + L AP R GF AVEWGG + Sbjct: 122 KEANEFIIYWLPKMEHNPYNLISF-QTEAYTDSAALTIDPAPDTLIRVFMAWQGLD----QPVEVEPQTLTAPNRTGFTAVEWGGAEI 204
BLAST of mRNA_L-elsbetiae_contig20740.6255.1 vs. uniprot
Match: A0A096B0K5_FLAPL (Uncharacterized protein n=19 Tax=Eubacteriales TaxID=186802 RepID=A0A096B0K5_FLAPL) HSP 1 Score: 80.9 bits (198), Expect = 8.890e-17 Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 4 RERCDMVTYWLPQLESSPFNAIYFVSVERYEKTARLTIVPAPDVTIRVFMAFRGVDGYDAELDTAEVEELRAPARKGFVAVEWGGMNLN 270 RE + + YWLP+LE +P+N + F + Y +A LTI PAPD IRVF+A++G+D A ++ E + L AP R GF AVEWGG ++ Sbjct: 127 READEFIIYWLPKLEGNPYNLLSF-QTDAYTDSAALTIDPAPDTLIRVFLAWKGLD---APVEV-EPQTLTAPERTGFTAVEWGGAEVD 210 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20740.6255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig20740.6255.1 >prot_L-elsbetiae_contig20740.6255.1 ID=prot_L-elsbetiae_contig20740.6255.1|Name=mRNA_L-elsbetiae_contig20740.6255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=96bp MRERCDMVTYWLPQLESSPFNAIYFVSVERYEKTARLTIVPAPDVTIRVFback to top mRNA from alignment at L-elsbetiae_contig20740:915..1598- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig20740.6255.1 ID=mRNA_L-elsbetiae_contig20740.6255.1|Name=mRNA_L-elsbetiae_contig20740.6255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=684bp|location=Sequence derived from alignment at L-elsbetiae_contig20740:915..1598- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig20740:915..1598- >mRNA_L-elsbetiae_contig20740.6255.1 ID=mRNA_L-elsbetiae_contig20740.6255.1|Name=mRNA_L-elsbetiae_contig20740.6255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=576bp|location=Sequence derived from alignment at L-elsbetiae_contig20740:915..1598- (Laminarionema elsbetiae ELsaHSoW15)back to top |