mRNA_L-elsbetiae_contig205.6175.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig205.6175.1 vs. uniprot
Match: A0A6H5KGF5_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGF5_9PHAE) HSP 1 Score: 494 bits (1272), Expect = 1.610e-172 Identity = 255/355 (71.83%), Postives = 274/355 (77.18%), Query Frame = 1 Query: 106 ILGYVVITPMVA---KGFGVHMMAKGFGNQSDRKQKPLSSNVIIQPP-PLTPEQPNTRVGAQGGGLPEDDFSQFXXXXXXXXXXXXXXXXXKG--MPPEVLDRIRERHGFERFDDKLFPGIRLLHADPVVFEVDNFFTPQECNAYVAMSTLKQSGRRKGGLEPTELQSATTSSQFQQQRTSTTWFHAYASAPELIAKASLLLGVDDHRKWEEPQTVRYRPGERFNWHLDALPPSECGASRGGQRTATVLVYLTDMDATAGGATAFRDLGPLRVRPKKGKCLIFFPSFGGEAGAPFDSRVLHAGEVVGKGSKAKEKYIAQFWCHKKPYPPSVPEGSSHEAAEQPIADYISRFVGAG 1152 +L V +TP VA M +GFG QS R P + P P P+Q R G LPED FSQF K P EV DRIRERHGFE FD+KLFPGIRLLHADPVVFEV+ FFTPQEC+AY+AMSTLK+SGRRKGGL PTELQSATTSSQ QQ TSTTWFH YASAPEL+AKASLLLGVDD+ KWEEPQTVRYRPGERFNWHLDALPPSECGAS+GGQRTATVLVYLT+M A GGATAFRDLGPLRVRPKKGKCL+FFPSFGGEAG+PFDSRVLHAGEVVG+G+KAKEKYIAQ WCHKKPYPPSVPEGSSHEAAE+PI DY RF AG Sbjct: 6 LLACVALTPGVAFNPNNQARLRMQQGFGKQS-RSNTPAKLKTPAKAPYPAVPKQTPVRAGE----LPEDAFSQFPPLTPEQKQTLQKAPAGKATAFPVEVADRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKGGLAPTELQSATTSSQCQQXXTSTTWFHHYASAPELVAKASLLLGVDDYSKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYARRFAEAG 355
BLAST of mRNA_L-elsbetiae_contig205.6175.1 vs. uniprot
Match: D7G1H9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H9_ECTSI) HSP 1 Score: 244 bits (623), Expect = 1.810e-74 Identity = 130/252 (51.59%), Postives = 165/252 (65.48%), Query Frame = 1 Query: 436 LFPGIRLLHADPVVFEVDNFFTPQECNAYVAMST------------LKQSGRRKGGLEPTELQSATTSSQFQQ--QRTSTTWFHAYASAPELIAKASLLLGVD-DHRKWEEPQTVRYRPGERFNWHLDALPPSECGASRGGQRTATVLVYLTDMDATAGGATAFRDLGPLRVRPKKGKCLIFFPSFGGEAGAPFDSRVLHAGEVVGKGSKAKEKYIAQFWCHKKPYPPSVPEGSSHEAAEQPIADYISRFVG 1146 LFPG+RLLHA+P V V +FFT +EC+ Y++ S G P +SAT + QRTSTTWFH +++ PEL+AKAS L+GV + +WEE QTVRYRPGE+F WHLDALPP+ ASRGGQR AT+LVYLT+M GGATAFRDLGPLRVRP+KG L+FFPS GG PFD R LHAGEVV G++ ++K+IAQ W + Y P+VP+ + HE A +A++ + G Sbjct: 100 LFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAE-QDKWIAQLWLRESRYTPTVPKQNRHEHAAAVVAEFDKIWQG 350
BLAST of mRNA_L-elsbetiae_contig205.6175.1 vs. uniprot
Match: A0A6H5L0Y5_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y5_9PHAE) HSP 1 Score: 241 bits (616), Expect = 7.300e-71 Identity = 148/383 (38.64%), Postives = 195/383 (50.91%), Query Frame = 1 Query: 235 PPLTPEQPNTRVGAQ-----GGGLPEDDFSQFXXXXXXXXXXXXXXXXXKGMPPEVLDRIRERHGFERF-------------------------------------------------------DDKLFPGIRLLHADPVVFEVDNFFTPQECNAYVAMSTLKQSGRRKGGLE----------------PTELQSATTSSQFQQ--QRTSTTWFHAYASAPELIAKASLLLGVD-DHRKWEEPQTVRYRPGERFNWHLDALPPSECGASRGGQRTATVLVYLTDMDATAGGATAFRDLGPLRVRPKKGKCLIFFPSFGGEAGAPFDSRVLHAGEVVGKGSKAKEKYIAQFWCHKKPYPPSVPEGSSHEAAEQPIADYISRFVG 1146 PPL+P+ + +G GG+P + Q + +PP+VL+ IR RHG E F LFPG+RLLHA+P V V +FFT +EC+ Y++ S P +SAT + QRTSTTWFH +++ PEL+AKAS L+GV + +WEE QTVRYRPGE+F WHLDALPP+ AS+GGQR AT+LVYLT+M GGATAFRDLGPLRVRP+KG L+FFPS GG PFD R LHAGEVV G++ ++K+IAQ W ++ Y P+VP+ + HE A +A++ + G Sbjct: 212 PPLSPDTLKSIMGVDVFDLPAGGIPASERGQ-----------------QEALPPQVLECIRGRHGLEEFAGGRRLLDPEYFGADGEAGDAALTGSXXXXXXXXXXXXXXXXXXXXXGGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXXXXXXXGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAE-QDKWIAQLWLRERRYTPTVPKQNRHEHAASAVAEFDKIWQG 576
BLAST of mRNA_L-elsbetiae_contig205.6175.1 vs. uniprot
Match: A0A7S2KCF3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF3_9STRA) HSP 1 Score: 237 bits (604), Expect = 1.490e-70 Identity = 121/236 (51.27%), Postives = 156/236 (66.10%), Query Frame = 1 Query: 439 FPGIRLLHADPVVFEVDNFFTPQECNAYVAMSTLKQSGRRKGGLEPTELQSATTSSQFQQQRTSTTWFHAYASAPELIAKASLLLGVDDHRKWEEPQTVRYRPGERFNWHLDALPPSECGASRGGQRTATVLVYLTDMDATAGGATAFRDLGP-----LRVRPKKGKCLIFFPSFGGEAGAPFDSRVLHAGEVVGKGSKAKEKYIAQFWCHKKPYPPSVPEGSSHEAAEQPIADYI 1131 F R+LH DP+V VD+FFT +EC+ Y+AMS +G + G T + + + QRTSTTWFH Y + PEL+AK+S L G+DD +EEPQTVRY+P ++F WHLDAL P S+GGQRTAT+LVYLTD+ GGAT FRDLGP L+V+PKKG L+FFP+ GG PFD R LHAGEVV K+ +K+IAQ W + Y P+VP + H AA +PI+ Y+ Sbjct: 202 FDKFRVLHIDPLVIAVDDFFTHEECDKYIAMSD-PTAGNKDGDAVMTRSMTVGKDAAAKSQRTSTTWFHHYKNVPELMAKSSRLFGLDDIGVFEEPQTVRYQPDQKFTWHLDALAPGSENISKGGQRTATLLVYLTDLGPEDGGATTFRDLGPAEGEPLKVQPKKGSALLFFPAAGGIPNTPFDIRTLHAGEVVSADCKS-DKWIAQLWLREDSYEPTVPPENVHAAATEPISQYV 435
BLAST of mRNA_L-elsbetiae_contig205.6175.1 vs. uniprot
Match: A0A7S2UAB3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAB3_9STRA) HSP 1 Score: 233 bits (595), Expect = 9.290e-69 Identity = 125/247 (50.61%), Postives = 160/247 (64.78%), Query Frame = 1 Query: 433 KLFPGIRLLHADPVVFEVDNFFTPQECNAYVAMST---LKQSGRRKGG--LEPTELQSATT---SSQFQQQRTSTTWFHAYASAPELIAKASLLLGVDDHRKWEEPQTVRYRPGERFNWHLDALPPSECGASRGGQRTATVLVYLTDMDATAGGATAFRDLG-----PLRVRPKKGKCLIFFPSFGGEAGAPFDSRVLHAGEVVGKGSKAKEKYIAQFWCHKKPYPPSVPEGSSHEAAEQPIADYIS 1134 K F R+LH DP+V VD+FFTP+EC+A +A ST + K G L P ++ + T S+ + QRTSTTWFH YA PEL+AKA L+G++D +EEPQTVRYR E F WHLDAL P+ A +GGQR AT+LVYLTD+ GGAT FRDLG PL+VRPKKG L+FFP+ GG P D R LH GE V ++ ++K+IAQ W + PY P+ P G+SH +A PI+DY + Sbjct: 233 KPFSKFRVLHVDPMVLCVDDFFTPEECDALIARSTTTVITADNNEKEGTTLLPMKIGQSKTVGKDSRARAQRTSTTWFHHYAGVPELMAKACRLMGINDISAFEEPQTVRYRRTEHFTWHLDALAPTPELADKGGQRCATLLVYLTDLSEKDGGATMFRDLGGSDGEPLKVRPKKGSALLFFPAAGGIPSVPLDLRTLHCGEAVASDAE-QDKWIAQLWLRETPYTPTAPPGNSHASASSPISDYCA 478
BLAST of mRNA_L-elsbetiae_contig205.6175.1 vs. uniprot
Match: K0SVE6_THAOC (Fe2OG dioxygenase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVE6_THAOC) HSP 1 Score: 225 bits (574), Expect = 1.020e-65 Identity = 121/239 (50.63%), Postives = 155/239 (64.85%), Query Frame = 1 Query: 439 FPGIRLLHADPVVFEVDNFFTPQECNAYVAMSTLKQSGRRK--GGLEPTELQSATT---SSQFQQQRTSTTWFHAYASAPELIAKASLLLGVDDHRKWEEPQTVRYRPGERFNWHLDALPPSECG-ASRGGQRTATVLVYLTDMDATAGGATAFRDLG---PLRVRPKKGKCLIFFPSFGGEAGAPFDSRVLHAGEVVGKGSKAKEKYIAQFWCHKKPYPPSVPEGSSHEAAEQPIADY 1128 F R+LH DP+V VD+FFT +EC+ YV MS ++ + + G L+P L + T S+ + QRTSTTWFH YA PEL+A+A+ LLG+ ++EEPQTVRYR E+F WHLDAL P +S GQR +T+LVYLTD+ + GGAT FRDLG PL+VRPKKG L+FFPS GG PFD R LH GE VG+ + EK+IAQ W ++ Y P+ P GS H A I +Y Sbjct: 229 FEQFRVLHVDPMVIAVDDFFTSEECDKYVQMSIDAENNQDQEAGALQPLLLGQSQTVGKDSRSKAQRTSTTWFHHYAGVPELMARAARLLGLPGISRFEEPQTVRYRRSEKFTWHLDALSPDVANDSSSAGQRVSTLLVYLTDLKSEEGGATMFRDLGGDGPLKVRPKKGSALLFFPSAGGIPDCPFDIRTLHCGEAVGEDAP-NEKWIAQLWLRQRDYTPTAPAGSEHRKATVAIQEY 466
BLAST of mRNA_L-elsbetiae_contig205.6175.1 vs. uniprot
Match: A0A7S2KB24_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KB24_9STRA) HSP 1 Score: 224 bits (571), Expect = 2.170e-65 Identity = 125/260 (48.08%), Postives = 159/260 (61.15%), Query Frame = 1 Query: 439 FPGIRLLHADPVVFEVDNFFTPQECNAYVAMST---LKQSGRRKGGLEPTELQSATT------------SSQFQQQRTSTTWFHAYASAPELIAKASLLLGVDDHRKWEEPQTVRYRPGERFNWHLDALPPSECGASRG-GQRTATVLVYLTDMDATAGGATAFRDLG---------PLRVRPKKGKCLIFFPSFGGEAGAPFDSRVLHAGEVVGKGSKAKEKYIAQFWCHKKPYPPSVPEGSSHEAAEQPIADYISRFV 1143 F R+LH DP+V +D+FFT +EC+ YV +S +Q+ G E T+ ++A S+ + QRTSTTWFH Y PEL+AKAS LLG++ ++EEPQTVRYR E+F WHLDAL P E G GQR AT+LVYLTD+ A +GGAT FRDLG PL+VRPKKG L+FFPS GG GAPFD R LH GE V + ++ EK+IAQ W ++ Y P+ P G+SH A I Y + V Sbjct: 204 FEKFRVLHTDPMVLAIDDFFTNEECDKYVQISIDAEKQQTNSAAAGDETTQEETALQPMLLGQSQTVGKDSRSKAQRTSTTWFHYYKGVPELMAKASRLLGLEGIDRFEEPQTVRYRRNEKFTWHLDALSPEEANNPSGSGQRIATLLVYLTDVPAGSGGATMFRDLGGNNGAEDSQPLKVRPKKGSALLFFPSAGGIPGAPFDIRTLHCGEAVAEDAE-NEKWIAQLWLRQRGYEPTAPVGNSHGDASDEIGRYCTSLV 462
BLAST of mRNA_L-elsbetiae_contig205.6175.1 vs. uniprot
Match: A0A7S1ZRX7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRX7_9STRA) HSP 1 Score: 217 bits (553), Expect = 4.030e-65 Identity = 115/239 (48.12%), Postives = 148/239 (61.92%), Query Frame = 1 Query: 439 FPGIRLLHADPVVFEVDNFFTPQECNAYVAMSTLKQSGRRKGGLEPTELQSATTSSQF--QQQRTSTTWFHAYASAPELIAKASLLLGVDDHRKWEEPQTVRYRPGERFNWHLDALPPSECGASRGGQRTATVLVYLTDMDATAGGATAFRDLG-----PLRVRPKKGKCLIFFPSFGGEAGAPFDSRVLHAGEVVGKGSKAKEKYIAQFWCHKKPYPPSVPEGSSHEAAEQPIADYIS 1134 F R+LH DP+V VD+F T EC+ VA++ + + QS T + QRTSTTWFH Y P+L+AKAS LLG+D+ +WEEPQTVRYR E+F WHLDAL PS+ A GGQR AT++VYL D+ +GG+T FRDLG PL+V PKKG L+FFP+ GG PFD R LHAGE V S+ +K+IAQ W + Y P+ P G++H AA I+ Y + Sbjct: 26 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKYDKNANTAPMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESE-DDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKYCN 263
BLAST of mRNA_L-elsbetiae_contig205.6175.1 vs. uniprot
Match: A0A7S2N1B0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1B0_9STRA) HSP 1 Score: 217 bits (552), Expect = 1.300e-64 Identity = 115/237 (48.52%), Postives = 147/237 (62.03%), Query Frame = 1 Query: 439 FPGIRLLHADPVVFEVDNFFTPQECNAYVAMSTLKQSGRRKGGLEPTEL-QSATTSSQF--QQQRTSTTWFHAYASAPELIAKASLLLGVDDHRKWEEPQTVRYRPGERFNWHLDALPPSECGASRGGQRTATVLVYLTDMDATAGGATAFRDLG-----PLRVRPKKGKCLIFFPSFGGEAGAPFDSRVLHAGEVVGKGSKAKEKYIAQFWCHKKPYPPSVPEGSSHEAAEQPIAD 1125 F R+LH DP++ +D+F TP EC+ Y+++ T + P E+ QS T + QRTSTTWFH Y L+AKAS LLG+ +WEEPQTVRYR E+F WHLDAL PSE GGQR AT+LVYL D+ GG+T FRDLG PL+V+PKKG L+FFP+ GG PFD R LHAGE V S +K+IAQ W + Y P+ P G+SHEAA + +++ Sbjct: 57 FTKFRILHTDPMLLSIDDFLTPTECDTYISL-TSNPKYDKNANTAPMEIGQSKTVGKDMYSKSQRTSTTWFHHYRGMAGLMAKASRLLGLKGIERWEEPQTVRYRRSEKFTWHLDALAPSEELTKAGGQRVATLLVYLADLPDGCGGSTMFRDLGGESGEPLKVQPKKGSALLFFPAAGGIPNVPFDIRTLHAGEAVSDESD-DDKWIAQLWLREHVYTPTAPPGNSHEAAVEAVSE 291
BLAST of mRNA_L-elsbetiae_contig205.6175.1 vs. uniprot
Match: A0A7S4QXQ4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QXQ4_9STRA) HSP 1 Score: 217 bits (553), Expect = 7.070e-64 Identity = 115/239 (48.12%), Postives = 148/239 (61.92%), Query Frame = 1 Query: 439 FPGIRLLHADPVVFEVDNFFTPQECNAYVAMSTLKQSGRRKGGLEPTELQSATTSSQF--QQQRTSTTWFHAYASAPELIAKASLLLGVDDHRKWEEPQTVRYRPGERFNWHLDALPPSECGASRGGQRTATVLVYLTDMDATAGGATAFRDLG-----PLRVRPKKGKCLIFFPSFGGEAGAPFDSRVLHAGEVVGKGSKAKEKYIAQFWCHKKPYPPSVPEGSSHEAAEQPIADYIS 1134 F R+LH DP+V VD+F T EC+ VA++ + + QS T + QRTSTTWFH Y P+L+AKAS LLG+D+ +WEEPQTVRYR E+F WHLDAL PS+ A GGQR AT++VYL D+ +GG+T FRDLG PL+V PKKG L+FFP+ GG PFD R LHAGE V S+ +K+IAQ W + Y P+ P G++H AA I+ Y + Sbjct: 123 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKYDKNANTAPMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESE-DDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKYCN 360 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig205.6175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig205.6175.1 >prot_L-elsbetiae_contig205.6175.1 ID=prot_L-elsbetiae_contig205.6175.1|Name=mRNA_L-elsbetiae_contig205.6175.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=359bp MWHPILGYVVITPMVAKGFGVHMMAKGFGNQSDRKQKPLSSNVIIQPPPLback to top mRNA from alignment at L-elsbetiae_contig205:16617..18499- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig205.6175.1 ID=mRNA_L-elsbetiae_contig205.6175.1|Name=mRNA_L-elsbetiae_contig205.6175.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1883bp|location=Sequence derived from alignment at L-elsbetiae_contig205:16617..18499- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig205:16617..18499- >mRNA_L-elsbetiae_contig205.6175.1 ID=mRNA_L-elsbetiae_contig205.6175.1|Name=mRNA_L-elsbetiae_contig205.6175.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2154bp|location=Sequence derived from alignment at L-elsbetiae_contig205:16617..18499- (Laminarionema elsbetiae ELsaHSoW15)back to top |