mRNA_L-elsbetiae_contig19961.5983.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig19961.5983.1 vs. uniprot
Match: A0A6H5JDG1_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDG1_9PHAE) HSP 1 Score: 195 bits (496), Expect = 1.160e-55 Identity = 106/143 (74.13%), Postives = 114/143 (79.72%), Query Frame = 1 Query: 1 WQAGSGKIIRPSKEEMFFLPQRPYCTLGPLRDQITYPSSQVVGDVEEVG-DGSGGQVEGGVTEPVGAGGGSNSEDGELLSLLEKVDLGSLASMMGDGDSHAGLDAVRDWSDLLSLGEQQRLAFARLLYNRPTLAILDESTSAL 426 W GSGKI+RP+KEEMFFLPQRPYCTLGPLRDQITYPSS G E G DG G VEG + GS ++D ELL LLEKVDLG LA MMG GD+HAGL AVRDWSD+LSLGEQQRLAFARLLYN+PTLAILDESTSAL Sbjct: 602 WTTGSGKIVRPTKEEMFFLPQRPYCTLGPLRDQITYPSSH--GGAEAAGEDGDAGAVEGTAEK------GSIADDDELLDLLEKVDLGRLAVMMGSGDAHAGLGAVRDWSDMLSLGEQQRLAFARLLYNKPTLAILDESTSAL 736
BLAST of mRNA_L-elsbetiae_contig19961.5983.1 vs. uniprot
Match: A0A835ZDB9_9STRA (Putative ABC transporter Nda n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDB9_9STRA) HSP 1 Score: 152 bits (385), Expect = 9.140e-41 Identity = 85/142 (59.86%), Postives = 94/142 (66.20%), Query Frame = 1 Query: 1 WQAGSGKIIRPSKEEMFFLPQRPYCTLGPLRDQITYPSSQVVGDVEEVGDGSGGQVEGGVTEPVGAGGGSNSEDGELLSLLEKVDLGSLASMMGDGDSHAGLDAVRDWSDLLSLGEQQRLAFARLLYNRPTLAILDESTSAL 426 W AG G I RP EE+FFLPQRPYCTLGPLRDQITYP + EG EP D ELL LL +V L LAS+ GDGD HAGL +V+DWSD+LSLGEQQRLAFARLLYN P LA+LDE+TSAL Sbjct: 426 WGAGCGAITRPPPEEIFFLPQRPYCTLGPLRDQITYPHRK----------------EG---EP---------SDAELLDLLRRVGLPDLASLSGDGDEHAGLWSVKDWSDMLSLGEQQRLAFARLLYNEPRLAVLDEATSAL 539
BLAST of mRNA_L-elsbetiae_contig19961.5983.1 vs. uniprot
Match: A0A6V1QMT5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QMT5_HETAK) HSP 1 Score: 146 bits (369), Expect = 3.190e-38 Identity = 78/142 (54.93%), Postives = 94/142 (66.20%), Query Frame = 1 Query: 1 WQAGSGKIIRPSKEEMFFLPQRPYCTLGPLRDQITYPSSQVVGDVEEVGDGSGGQVEGGVTEPVGAGGGSNSEDGELLSLLEKVDLGSLASMMGDGDSHAGLDAVRDWSDLLSLGEQQRLAFARLLYNRPTLAILDESTSAL 426 W G+G I RP +EMFFLPQRPYCTLG LRDQ+TYP P G ++ D +LL++L+KVDLG+LA MG GD HAGL+ VRDWS LSLGEQQRLAF RLL++RP++AILDE+TSAL Sbjct: 523 WTRGAGVITRPPSDEMFFLPQRPYCTLGSLRDQLTYPL------------------------PAG-----DTPDADLLAVLDKVDLGALAERMGGGDPHAGLNKVRDWSATLSLGEQQRLAFGRLLWSRPSVAILDEATSAL 635
BLAST of mRNA_L-elsbetiae_contig19961.5983.1 vs. uniprot
Match: A0A7S0V959_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V959_9CRYP) HSP 1 Score: 130 bits (327), Expect = 1.730e-34 Identity = 73/142 (51.41%), Postives = 90/142 (63.38%), Query Frame = 1 Query: 1 WQAGSGKIIRPSKEEMFFLPQRPYCTLGPLRDQITYPSSQVVGDVEEVGDGSGGQVEGGVTEPVGAGGGSNSEDGELLSLLEKVDLGSLASMMGDGDSHAGLDAVRDWSDLLSLGEQQRLAFARLLYNRPTLAILDESTSAL 426 W AG+G + RP E FFLPQRPYCTLG LR+Q+ YP GG+V G + D ELL++L+KV L +LA M+ + GLDAVRDW+ +LSLGEQQRLAF RLL NRP+LAILDE++SAL Sbjct: 106 WTAGNGHVTRPPPGETFFLPQRPYCTLGTLREQLLYPKLP------------GGRV-----------GALDVPDAELLAVLQKVRLPNLAKMVAGEEGGNGLDAVRDWTSMLSLGEQQRLAFGRLLVNRPSLAILDEASSAL 224
BLAST of mRNA_L-elsbetiae_contig19961.5983.1 vs. uniprot
Match: A0A7S2PH87_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PH87_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.890e-34 Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = 1 Query: 1 WQAGSGKIIRPSKEEMFFLPQRPYCTLGPLRDQITYPSSQVVGDVEEVGDGSGGQVEGGVTEPVGAGGGSNSEDGELLSLLEKVDLGSLASMMGDGDSHAGLDAVRDWSDLLSLGEQQRLAFARLLYNRPTLAILDESTSAL 426 W GSG+I+RPS ++++FLPQRPYC G LRDQ+ YPS+++ + + DG +E E S+ D ELL +L VDL LAS +GDGD GL+ V D+S+ LSLGEQQRLAF RL+ NRP+L +LDESTSAL Sbjct: 819 WSNGSGEIVRPSSDQIYFLPQRPYCPPGSLRDQLLYPSTELSDNYDGTQDGWSRPIEQRRVEW------SSMSDAELLDVLVAVDLPGLASRIGDGDPIRGLNTVLDYSNTLSLGEQQRLAFGRLVINRPSLVVLDESTSAL 954
BLAST of mRNA_L-elsbetiae_contig19961.5983.1 vs. uniprot
Match: A0A448ZPF5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZPF5_9STRA) HSP 1 Score: 135 bits (340), Expect = 3.650e-34 Identity = 75/142 (52.82%), Postives = 91/142 (64.08%), Query Frame = 1 Query: 1 WQAGSGKIIRPSKEEMFFLPQRPYCTLGPLRDQITYPSSQVVGDVEEVGDGSGGQVEGGVTEPVGAGGGSNSEDGELLSLLEKVDLGSLASMMGDGDSHAGLDAVRDWSDLLSLGEQQRLAFARLLYNRPTLAILDESTSAL 426 W AGSG I RP E+++FLPQRPYCT+G LRDQ+ YPS + + E S G V + D +LL +LEKVDLG LA GDGD GL+ V DWS+ LSLGEQQRLAF R+L N+P L +LDE+TSAL Sbjct: 572 WTAGSGSITRPGDEDVYFLPQRPYCTVGSLRDQLLYPSLEQQQEDEGTKXNSTDTDGNGTPRHVVN---RSLSDQDLLDVLEKVDLGELAKRSGDGDPFKGLETVLDWSNTLSLGEQQRLAFGRVLVNQPKLVVLDEATSAL 710
BLAST of mRNA_L-elsbetiae_contig19961.5983.1 vs. uniprot
Match: A0A1E7FND4_9STRA (ABC transporter n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FND4_9STRA) HSP 1 Score: 134 bits (337), Expect = 4.110e-34 Identity = 70/142 (49.30%), Postives = 89/142 (62.68%), Query Frame = 1 Query: 1 WQAGSGKIIRPSKEEMFFLPQRPYCTLGPLRDQITYPSSQVVGDVEEVGDGSGGQVEGGVTEPVGAGGGSNSEDGELLSLLEKVDLGSLASMMGDGDSHAGLDAVRDWSDLLSLGEQQRLAFARLLYNRPTLAILDESTSAL 426 W AG G I RP+ E+++FLPQRPYCT+G L+DQ+ YPS + D + D +LL++LE+VDLG LAS GDGD GL+A DWS+ LSLGEQQRLAF R+L N+P L I+DE+TSAL Sbjct: 374 WTAGKGSITRPADEDVYFLPQRPYCTMGSLKDQLLYPSLEKTND-------------------------NYLSDQDLLNILEQVDLGELASRSGDGDPIRGLNACLDWSNNLSLGEQQRLAFGRVLVNKPRLVIVDEATSAL 490
BLAST of mRNA_L-elsbetiae_contig19961.5983.1 vs. uniprot
Match: I2CQX5_NANGC (Abc transporter (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQX5_NANGC) HSP 1 Score: 134 bits (338), Expect = 5.540e-34 Identity = 76/142 (53.52%), Postives = 92/142 (64.79%), Query Frame = 1 Query: 1 WQAGSGKIIRPSKEEMFFLPQRPYCTLGPLRDQITYPSSQVVGDVEEVGDGSGGQVEGGVTEPVGAGGGSNSEDGELLSLLEKVDLGSLASMMGDGDSHAGLDAVRDWSDLLSLGEQQRLAFARLLYNRPTLAILDESTSAL 426 W +G G+I RP+ EMFFLPQRPYCTLG LRDQ+ YP + E + P+ S +E+ ELL +LE V+LG L MG+G + GLD + DWS +LSLGEQQRLAF RLLYNRP LAILDE+TSAL Sbjct: 494 WSSGCGRITRPTTAEMFFLPQRPYCTLGTLRDQLHYPQKPPSTXXXXXXFDT--SSEASSSNPLVP---SAAENEELLQILEAVNLGDLPLRMGNGSAADGLDVMTDWSGILSLGEQQRLAFGRLLYNRPKLAILDEATSAL 630
BLAST of mRNA_L-elsbetiae_contig19961.5983.1 vs. uniprot
Match: A0A7S2XZ84_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ84_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.080e-33 Identity = 74/144 (51.39%), Postives = 88/144 (61.11%), Query Frame = 1 Query: 1 WQAGSGKIIRPSKEEMFFLPQRPYCTLGPLRDQITYPSSQVVGDVEEVGDGSGGQVEGGVTEPVGAGGGSNSEDGELLSLLEKVDLGSLASMMGDG--DSHAGLDAVRDWSDLLSLGEQQRLAFARLLYNRPTLAILDESTSAL 426 W +G+G+++RP EMFFLPQRPYC GPL DQ+TYP Q GV E LL LLE+V LGSLA M D GL+AVRDW+D+LSLGEQQRL FARLL+NRP +A+LDE+TSAL Sbjct: 140 WTSGTGEVVRPPSSEMFFLPQRPYCPPGPLADQLTYP-----------------QRAEGVPED------------RLLELLEQVGLGSLAVRMAGPSMDPAKGLEAVRDWADILSLGEQQRLGFARLLFNRPRVAVLDEATSAL 254
BLAST of mRNA_L-elsbetiae_contig19961.5983.1 vs. uniprot
Match: B7G8L4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8L4_PHATC) HSP 1 Score: 131 bits (330), Expect = 5.050e-33 Identity = 75/142 (52.82%), Postives = 92/142 (64.79%), Query Frame = 1 Query: 1 WQAGSGKIIRPSKEEMFFLPQRPYCTLGPLRDQITYPSSQVVGDVEEVGDGSGGQVEGGVTEPVGAGGGSNSEDGELLSLLEKVDLGSLASMMGDGDSHAGLDAVRDWSDLLSLGEQQRLAFARLLYNRPTLAILDESTSAL 426 W G+G + RP EE++FLPQRPYCT+G LRDQ+ YP+ + +E G + G P D ELL +LEKVDL +A GDGD+ GL+AV DWS++LSLGEQQRLAF RLL NRP L ILDE+TSAL Sbjct: 397 WTVGNGVVSRPVDEEVYFLPQRPYCTIGSLRDQLLYPAI----NAQEY---DGAEANGQKIVPRSHILKDQWTDEELLLVLEKVDLVEVAERAGDGDATKGLEAVLDWSNMLSLGEQQRLAFGRLLVNRPRLVILDEATSAL 531 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19961.5983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19961.5983.1 >prot_L-elsbetiae_contig19961.5983.1 ID=prot_L-elsbetiae_contig19961.5983.1|Name=mRNA_L-elsbetiae_contig19961.5983.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=142bp WQAGSGKIIRPSKEEMFFLPQRPYCTLGPLRDQITYPSSQVVGDVEEVGDback to top mRNA from alignment at L-elsbetiae_contig19961:1064..2167- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig19961.5983.1 ID=mRNA_L-elsbetiae_contig19961.5983.1|Name=mRNA_L-elsbetiae_contig19961.5983.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1104bp|location=Sequence derived from alignment at L-elsbetiae_contig19961:1064..2167- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19961:1064..2167- >mRNA_L-elsbetiae_contig19961.5983.1 ID=mRNA_L-elsbetiae_contig19961.5983.1|Name=mRNA_L-elsbetiae_contig19961.5983.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=852bp|location=Sequence derived from alignment at L-elsbetiae_contig19961:1064..2167- (Laminarionema elsbetiae ELsaHSoW15)back to top |