Homology
BLAST of mRNA_L-elsbetiae_contig1957.5828.1 vs. uniprot
Match:
A0A6H5JZR7_9PHAE (ENTH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZR7_9PHAE)
HSP 1 Score: 323 bits (828), Expect = 8.030e-104
Identity = 160/175 (91.43%), Postives = 169/175 (96.57%), Query Frame = 2
Query: 200 MDKLGQLSLDKLSLDKVKNLVGEVRDTIAPRNDTEKRVYEALSNKNWGASSTLLNDIARDTYDFEKYGIVLPLIWSSLQSPSREWRKVFKALSLLEHLVKNGAERVIEDARDNLHRVRMLADFNYYEGPVDKGSGVREMSKKVIELLKDNEMIREEREKSRKLRDKYVGLGGGSG 724
MDKL QL+LDKLSLDKVKN+VGEVRDTIAPRNDTEKRVYEALSNKNWGASSTLLNDIARDTYDFEKYGIVLPLIW++LQSPSREWRKVFKAL LLEHL+KNGAERVIEDARDNLHRVRML+DFNYYEGP+DKGSGVRE SK+VIELLKDN+MIREEREK RKLRDKYVGLG G G
Sbjct: 1 MDKLSQLTLDKLSLDKVKNMVGEVRDTIAPRNDTEKRVYEALSNKNWGASSTLLNDIARDTYDFEKYGIVLPLIWTALQSPSREWRKVFKALCLLEHLIKNGAERVIEDARDNLHRVRMLSDFNYYEGPIDKGSGVREKSKQVIELLKDNDMIREEREKCRKLRDKYVGLGSGGG 175
BLAST of mRNA_L-elsbetiae_contig1957.5828.1 vs. uniprot
Match:
A0A835YGI8_9STRA (ENTH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGI8_9STRA)
HSP 1 Score: 227 bits (579), Expect = 9.350e-72
Identity = 104/158 (65.82%), Postives = 138/158 (87.34%), Query Frame = 2
Query: 218 LSLDKLSLDKVKNLVGEVRDTIA-PRNDTEKRVYEALSNKNWGASSTLLNDIARDTYDFEKYGIVLPLIWSSLQSPSREWRKVFKALSLLEHLVKNGAERVIEDARDNLHRVRMLADFNYYEGPVDKGSGVREMSKKVIELLKDNEMIREEREKSRKL 688
+ LDKL++DK+KNL +V++ +A +NDTE++VY+ LSNKNWGASST+LNDIARD+YDF+KYG+++ ++W SL+SP REWRKVFKALSLLEHL+KNG ERV+EDARD +HR+ L+ FNYYEG DKGSGVRE SK++IELLK N+ IREER++++K+
Sbjct: 3 IGLDKLTIDKLKNLAADVKNQVAVAKNDTERQVYDVLSNKNWGASSTILNDIARDSYDFDKYGMIMTIVWQSLESPPREWRKVFKALSLLEHLIKNGTERVVEDARDRMHRITTLSQFNYYEGHADKGSGVREKSKQLIELLKSNDTIREERKRAQKV 160
BLAST of mRNA_L-elsbetiae_contig1957.5828.1 vs. uniprot
Match:
A0A6U4DQX0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4DQX0_9STRA)
HSP 1 Score: 213 bits (543), Expect = 8.820e-66
Identity = 98/168 (58.33%), Postives = 135/168 (80.36%), Query Frame = 2
Query: 236 SLDKVKNLVGEVRDTIAPRNDTEKRVYEALSNKNWGASSTLLNDIARDTYDFEKYGIVLPLIWSSLQSPSREWRKVFKALSLLEHLVKNGAERVIEDARDNLHRVRMLADFNYYEGPVDKGSGVREMSKKVIELLKDNEMIREEREKSRKLRDKYVGLG--GGSGAFS 733
+LD++++ V EVR +AP+N+TE+RVYEA+SNKNWGASSTLLN+IA D +E Y +V+ +IW SL + R WR++FK LSLLEHL+KNG ER++ED+RD++H++R L DFNYYEG D+GSGVRE +K++++LL DN IREER +R+LRDK+VG+ G +G FS
Sbjct: 6 TLDRLRSAVDEVRAQVAPKNETERRVYEAISNKNWGASSTLLNEIAADVRHYEHYSMVMKIIWESLNAAGRSWRQIFKTLSLLEHLIKNGPERIVEDSRDHMHKIRTLTDFNYYEGTTDRGSGVREKAKQIMDLLSDNTAIREERANARRLRDKFVGISNSGRTGGFS 173
BLAST of mRNA_L-elsbetiae_contig1957.5828.1 vs. uniprot
Match:
A0A7S1TU31_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU31_9STRA)
HSP 1 Score: 213 bits (543), Expect = 1.130e-63
Identity = 98/168 (58.33%), Postives = 135/168 (80.36%), Query Frame = 2
Query: 236 SLDKVKNLVGEVRDTIAPRNDTEKRVYEALSNKNWGASSTLLNDIARDTYDFEKYGIVLPLIWSSLQSPSREWRKVFKALSLLEHLVKNGAERVIEDARDNLHRVRMLADFNYYEGPVDKGSGVREMSKKVIELLKDNEMIREEREKSRKLRDKYVGLG--GGSGAFS 733
+LD++++ V EVR +AP+N+TE+RVYEA+SNKNWGASSTLLN+IA D +E Y +V+ +IW SL + R WR++FK LSLLEHL+KNG ER++ED+RD++H++R L DFNYYEG D+GSGVRE +K++++LL DN IREER +R+LRDK+VG+ G +G FS
Sbjct: 6 TLDRLRSAVDEVRAQVAPKNETERRVYEAISNKNWGASSTLLNEIAADVRHYEHYSMVMKIIWESLNAAGRSWRQIFKTLSLLEHLIKNGPERIVEDSRDHMHKIRTLTDFNYYEGTTDRGSGVREKAKQIMDLLSDNTAIREERANARRLRDKFVGISNSGRTGGFS 173
BLAST of mRNA_L-elsbetiae_contig1957.5828.1 vs. uniprot
Match:
A0A4D9CR71_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR71_9STRA)
HSP 1 Score: 218 bits (555), Expect = 1.260e-62
Identity = 102/174 (58.62%), Postives = 143/174 (82.18%), Query Frame = 2
Query: 194 TIMD-KLGQLSLDKLSLDKVKNLVGEVRDTIAPRNDTEKRVYEALSNKNWGASSTLLNDIARDTYDFEKYGIVLPLIWSSLQSPSREWRKVFKALSLLEHLVKNGAERVIEDARDNLHRVRMLADFNYYEGPVDKGSGVREMSKKVIELLKDNEMIREEREKSRKLRDKYVGLG 712
T+ D +G ++L+ ++L+ +KN+V E ++ I PR + EKR++EALSNKNWGASSTL+N IA DTYD+EKY VL IWS+L P R WR +FKAL+LL+HLVKNGAERV+E+ RD+LH++R LADFNY+EG +D+GSG+RE +K ++EL+ +N +REEREK+R+LR+K+VG+G
Sbjct: 159 TVRDPNIGNMNLN-INLESLKNMVDEAKNQIVPRTEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRDHLHKIRTLADFNYFEGSLDRGSGIREKAKMLMELVGENGRVREEREKARRLREKFVGIG 331
BLAST of mRNA_L-elsbetiae_contig1957.5828.1 vs. uniprot
Match:
A0A7S4DHG0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHG0_HETAK)
HSP 1 Score: 205 bits (522), Expect = 1.590e-62
Identity = 101/185 (54.59%), Postives = 139/185 (75.14%), Query Frame = 2
Query: 200 MDKLGQLSLDKLSLDKVKNLVGEVRDTIAPRNDTEKRVYEALSNKNWGASSTLLNDIARDTYDFEKYGIVLPLIWSSLQSPSREWRKVFKALSLLEHLVKNGAERVIEDARDNLHRVRMLADFNYYEGPVDKGSGVREMSKKVIELLKDNEMIREEREKSRKLRDKYVGL--------GGGSGAF 730
M+K L L+LD VKN+ +V + P+NDTEKRV+EALSN+NWGASSTL+ +IA+DT+D+EKY + LIW +L SP R WR VFK LSLLE LVK+G+ERVIEDARD+ HR+R+L +F+Y +G VD+G GVR+ +++++ELL NE IREER+K++ LR+K+ G+ GGG G++
Sbjct: 1 MNKFSIDKLKNLTLDDVKNIAQDVAINVKPKNDTEKRVHEALSNQNWGASSTLMQEIAKDTFDYEKYPQITKLIWQALDSPGRAWRSVFKGLSLLEFLVKHGSERVIEDARDHTHRLRLLLNFSYSDGGVDRGQGVRDKARQLVELLSSNETIREERQKAQALRNKFSGISNDSYSYGGGGGGSY 185
BLAST of mRNA_L-elsbetiae_contig1957.5828.1 vs. uniprot
Match:
A0A2D4BF42_PYTIN (Eukaryotic translation initiation factor 4 gamma 2 putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BF42_PYTIN)
HSP 1 Score: 211 bits (537), Expect = 6.010e-60
Identity = 98/169 (57.99%), Postives = 137/169 (81.07%), Query Frame = 2
Query: 224 LDKLSLDKVKNLVGEVRDTIAPR--NDTEKRVYEALSNKNWGASSTLLNDIARDTYDFEKYGIVLPLIWSSLQSPSREWRKVFKALSLLEHLVKNGAERVIEDARDNLHRVRMLADFNYYEGPVDKGSGVREMSKKVIELLKDNEMIREEREKSRKLRDKYVGLGGGSG 724
+DKL+LD++KN+V E + + + D EK++ EALSNKNWGASSTLLNDIA+ TYD+E Y +V+ IW +L S +R+WR VFKAL+LL+HL+KNG ERV+E+ARD++ ++R L DF+Y++G DKG+GVRE +K++++LL DN+ IREEREKSR++RDKYVG+ G G
Sbjct: 1 MDKLTLDRLKNVVDEAKSAVKAKLGTDVEKKLEEALSNKNWGASSTLLNDIAQLTYDYESYNVVMAKIWEALDSHARQWRTVFKALTLLDHLIKNGTERVVENARDHMFKLRSLTDFSYHDGSADKGAGVREKTKQILDLLNDNDRIREEREKSRRMRDKYVGISSGPG 169
BLAST of mRNA_L-elsbetiae_contig1957.5828.1 vs. uniprot
Match:
A0A8K1FFS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFS9_PYTOL)
HSP 1 Score: 210 bits (535), Expect = 1.150e-59
Identity = 97/175 (55.43%), Postives = 143/175 (81.71%), Query Frame = 2
Query: 224 LDKLSLDKVKNLVGEVRDTIAPR--NDTEKRVYEALSNKNWGASSTLLNDIARDTYDFEKYGIVLPLIWSSLQSPSREWRKVFKALSLLEHLVKNGAERVIEDARDNLHRVRMLADFNYYEGPVDKGSGVREMSKKVIELLKDNEMIREEREKSRKLRDKYVGLG---GGSGAFS 733
+DK +LD++KN+V E ++ + + D EK++ EALSNKNWGASSTLLN+IA+ TYD+E Y +++ IW ++ S +R+WR VFKAL+LL+HL+KNG ERV+E+ARD++ ++R L+DF+Y++G DKG+GVRE +K+++++L +N++IREEREKSRK+RDKYVG+G GG G FS
Sbjct: 1 MDKFTLDRLKNVVDEAKNAVKAKLGTDVEKKLEEALSNKNWGASSTLLNEIAQLTYDYESYNVIMTKIWEAMDSHARQWRTVFKALTLLDHLIKNGTERVVENARDHMFKLRALSDFSYHDGSADKGAGVREKTKQILDMLNNNDLIREEREKSRKMRDKYVGIGSVGGGMGGFS 175
BLAST of mRNA_L-elsbetiae_contig1957.5828.1 vs. uniprot
Match:
K3WLF9_GLOUD (ENTH domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLF9_GLOUD)
HSP 1 Score: 209 bits (533), Expect = 2.830e-59
Identity = 94/169 (55.62%), Postives = 139/169 (82.25%), Query Frame = 2
Query: 224 LDKLSLDKVKNLVGEVRDTIAPR--NDTEKRVYEALSNKNWGASSTLLNDIARDTYDFEKYGIVLPLIWSSLQSPSREWRKVFKALSLLEHLVKNGAERVIEDARDNLHRVRMLADFNYYEGPVDKGSGVREMSKKVIELLKDNEMIREEREKSRKLRDKYVGLGGGSG 724
+DK +LD+++N++ E + T+ + D E+++ +ALSNKNWGASSTLLN+IA+ TYD+E Y +V+ IW + S +R+WR VFKALSLL+HLVKNG ERV+E+ARD++ ++R L+DF+Y++G DKG+GVRE +K++++LL DN++IREEREKSR+LRDK++G+G G G
Sbjct: 1 MDKFALDRLRNVIDEAKSTVKAKMGTDVERKMEDALSNKNWGASSTLLNEIAQLTYDYESYNVVMKKIWEATDSHARQWRTVFKALSLLDHLVKNGTERVVENARDHMFKLRQLSDFSYHDGSADKGAGVREKAKQIVDLLNDNDLIREEREKSRRLRDKFIGIGSGGG 169
BLAST of mRNA_L-elsbetiae_contig1957.5828.1 vs. uniprot
Match:
A0A0P1AWZ9_PLAHL (Enth domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWZ9_PLAHL)
HSP 1 Score: 196 bits (498), Expect = 7.500e-59
Identity = 89/167 (53.29%), Postives = 135/167 (80.84%), Query Frame = 2
Query: 224 LDKLSLDKVKNLVGEVRDTIAPR--NDTEKRVYEALSNKNWGASSTLLNDIARDTYDFEKYGIVLPLIWSSLQSPSREWRKVFKALSLLEHLVKNGAERVIEDARDNLHRVRMLADFNYYEGPVDKGSGVREMSKKVIELLKDNEMIREEREKSRKLRDKYVGLGGG 718
+D+ +LDK+KN++ + + + + D E+++ EALSNKNWGASSTLLNDIA+ TYDFE YG+++ IW +L + R+WR V+KALSLL+HL+KNG ERVIE+ARD++ ++R L+ F+Y++G VD+G+GVR+ +K+++++L DN +IR EREK+ +LR+KYVG+G G
Sbjct: 1 MDRFALDKLKNVMDDAKSAVKAKMGTDVERKMEEALSNKNWGASSTLLNDIAQLTYDFEAYGLIMRKIWDALDAEGRQWRTVYKALSLLDHLIKNGTERVIENARDHMFKLRHLSGFSYHDGSVDRGNGVRDKAKQLVDILNDNNVIRTEREKAGRLRNKYVGIGSG 167
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1957.5828.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 8.03e-104 / Id = 91.43 Expect = 9.35e-72 / Id = 65.82 Expect = 8.82e-66 / Id = 58.33 Expect = 1.13e-63 / Id = 58.33 Expect = 1.26e-62 / Id = 58.62 Expect = 1.59e-62 / Id = 54.59 Expect = 6.01e-60 / Id = 57.99 Expect = 1.15e-59 / Id = 55.43 Expect = 2.83e-59 / Id = 55.62 Expect = 7.50e-59 / Id = 53.29 Sequence A0A6H5JZR7_9PHAE A0A835YGI8_9STRA A0A6U4DQX0_9STRA A0A7S1TU31_9STRA A0A4D9CR71_9STRA A0A7S4DHG0_HETAK A0A2D4BF42_PYTIN A0A8K1FFS9_PYTOL K3WLF9_GLOUD A0A0P1AWZ9_PLAHL
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 213.0
Seed ortholog evalue 1.4e-52
Seed eggNOG ortholog 115417.EPrPW00000017900
Preferred name ENT3
KEGG ko ko:K12471
KEGG Pathway ko04144,map04144
Hectar predicted targeting category other localisation
GOs GO:0000147,GO:0002020,GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005546,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005773,GO:0005774,GO:0005794,GO:0005856,GO:0005884,GO:0005886,GO:0005938,GO:0006605,GO:0006623,GO:0006810,GO:0006886,GO:0006892,GO:0006895,GO:0006897,GO:0006996,GO:0007010,GO:0007015,GO:0007034,GO:0008104,GO:0008150,GO:0008289,GO:0009579,GO:0009987,GO:0012505,GO:0012506,GO:0015031,GO:0015629,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0016197,GO:0016482,GO:0019899,GO:0022607,GO:0030029,GO:0030036,GO:0030117,GO:0030118,GO:0030120,GO:0030125,GO:0030135,GO:0030136,GO:0030276,GO:0030479,GO:0030659,GO:0030662,GO:0030665,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0031090,GO:0031410,GO:0031982,GO:0032266,GO:0032509,GO:0032511,GO:0032991,GO:0033036,GO:0033365,GO:0034498,GO:0034613,GO:0035091,GO:0042147,GO:0042886,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044396,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045184,GO:0045324,GO:0046907,GO:0048193,GO:0048475,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061645,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0080025,GO:0097435,GO:0097708,GO:0098588,GO:0098657,GO:0098796,GO:0098805,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:1901981,GO:1902936
EggNOG free text desc. Source PGD
EggNOG OGs 1MGDE@121069,KOG2056@1,KOG2056@2759
Ec32 ortholog description ENTH domain protein
Ec32 ortholog Ec-04_003620.1
COG Functional cat. F
Best tax level Pythiales
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko04131
Ec32 ortholog description ENTH/VHS
Ec32 ortholog Ec-04_003610.1
Exons 5
Model size 881
Cds size 681
Stop 0
Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815811.8904862-UTR-L-elsbetiae_contig1957:7778..7977 1622815811.8904862-UTR-L-elsbetiae_contig1957:7778..7977 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig1957 7779..7977 +
1691683118.461861-UTR-L-elsbetiae_contig1957:7778..7977 1691683118.461861-UTR-L-elsbetiae_contig1957:7778..7977 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig1957 7779..7977 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815811.9005122-CDS-L-elsbetiae_contig1957:7977..8048 1622815811.9005122-CDS-L-elsbetiae_contig1957:7977..8048 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 7978..8048 +
1691683118.4760244-CDS-L-elsbetiae_contig1957:7977..8048 1691683118.4760244-CDS-L-elsbetiae_contig1957:7977..8048 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 7978..8048 +
1622815811.913634-CDS-L-elsbetiae_contig1957:12275..12395 1622815811.913634-CDS-L-elsbetiae_contig1957:12275..12395 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 12276..12395 +
1691683118.4873388-CDS-L-elsbetiae_contig1957:12275..12395 1691683118.4873388-CDS-L-elsbetiae_contig1957:12275..12395 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 12276..12395 +
1622815811.9297602-CDS-L-elsbetiae_contig1957:13397..13476 1622815811.9297602-CDS-L-elsbetiae_contig1957:13397..13476 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 13398..13476 +
1691683118.502005-CDS-L-elsbetiae_contig1957:13397..13476 1691683118.502005-CDS-L-elsbetiae_contig1957:13397..13476 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 13398..13476 +
1622815811.9407394-CDS-L-elsbetiae_contig1957:14095..14231 1622815811.9407394-CDS-L-elsbetiae_contig1957:14095..14231 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 14096..14231 +
1691683118.5109181-CDS-L-elsbetiae_contig1957:14095..14231 1691683118.5109181-CDS-L-elsbetiae_contig1957:14095..14231 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 14096..14231 +
1622815811.9507134-CDS-L-elsbetiae_contig1957:15153..15428 1622815811.9507134-CDS-L-elsbetiae_contig1957:15153..15428 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 15154..15428 +
1691683118.522141-CDS-L-elsbetiae_contig1957:15153..15428 1691683118.522141-CDS-L-elsbetiae_contig1957:15153..15428 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 15154..15428 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1957.5828.1
>prot_L-elsbetiae_contig1957.5828.1 ID=prot_L-elsbetiae_contig1957.5828.1|Name=mRNA_L-elsbetiae_contig1957.5828.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=227bp
MDKLGQLSLDKLSLDKVKNLVGEVRDTIAPRNDTEKRVYEALSNKNWGAS STLLNDIARDTYDFEKYGIVLPLIWSSLQSPSREWRKVFKALSLLEHLVK NGAERVIEDARDNLHRVRMLADFNYYEGPVDKGSGVREMSKKVIELLKDN EMIREEREKSRKLRDKYVGLGGGSGAFSGGGGGGGYSGGGGGYSGGGGGG YSGGGGGGYSGGGGGYSGGGGASSRYG back to top mRNA from alignment at L-elsbetiae_contig1957:7779..15428+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1957.5828.1 ID=mRNA_L-elsbetiae_contig1957.5828.1|Name=mRNA_L-elsbetiae_contig1957.5828.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7650bp|location=Sequence derived from alignment at L-elsbetiae_contig1957:7779..15428+ (Laminarionema elsbetiae ELsaHSoW15)GACACGCAGAGAGGGGACAATCGCTCGACAGGCGCACGCGCTTCCGTTGC
AAAGGGCTGAGATTATTTCGCTGAAGCGAAGCAGTGCTTGCGCGAGACTG
CATAGCGGGGGTACGTCGCAGGGTTTATCTCTCCAGGAAGTTCTTTGAGA
GCGCACACGTCGGAACAGGCGAACCGGCGAACCTCACCTCCTAACCATC A
TGGACAAGCTAGGGCAGCTTTCGCTGGACAAGCTGTCTCTGGACAAGGTC
AAGAACCTTGTCGGCGAAGT GTGAGTGCCCGTGTTATTGCTGCTTTTACT
CGGCTGATGGTCTCGAAAATGAAATGGAATTCGGCCGGCTCGTGTGTGAT
GGGTTCCATCCAAAGCTCACCCCCCTCTGTTTTACATGCATATGATACAT
GGACTACATAGATACCCAGGTGCATCAATTATCTCCGCCTTCGTTGTGCG
AGGAATCCGTTGCACCGCCCCACGGGAGGCATCACTTGCCACAGAAGGCA
TGGAAGAGACTCTGCCGCGCAATGGGAAAGGCGGGGGTGGAAGCGGTTCT
ATTTGTTGCCCCGATTTTGGTGGGTTGTTCCGCGTGTTGCCCGCACGCCT
ACAATACACAGCTACACATATGGTACCTGTACGCTAGTACGCTAGTACGC
ACGCTTCACACATAGGGTTACGCCCGTGTGGGCGTTCGGCGCGAAGGCGG
AAGACAGCGAATCGCCAATGGTTCTTGTGGCTTGGTGTGTTTGCAAGTTG
TTGCACTCGCGGAAGCACTGCTATCGGGCAAGAATTGTCGAAGGCGTGTT
GCCTGCTGCCGACGCAGTGGTGTTGGAACTCGGCTTTCTTTCAAGGGGGC
GCATACGGGATTGGGGGTTTTGGGAGGGGCTTCCCGGAACGTAAAAAAAC
ACAGATCTTCAGTGTAGGCAGATACGGAGAGGTCCAAAGCTCAGCGTGGA
GAAAGTCATCCAAGCCAGGAGTCAGAGGATATGTGGATAAGGTTTGGCTG
CACAGTAATTTAGCACAAAAAATTAGGCGTCAATTCTTGCAGGGCACTAC
TGACTCTCAGCATCGCTTGACATTCGTACTGGACTGGAAGAGCTCGGACG
AGAGAGAGAGCCAGTCCGCCGATCCACAGCACAATTTTGGGTAGTTTGGC
GGCAGAGTCAGATAGCGTCCATCCACGAGGAAACGATACGTACACATCGG
AAAGTTACGGTCCCAGGTGTGTAAAACACCTGCCAATACCGACAGCCGTC
TTGTAGGGCACTAACTTACAGCTGCTGCTGTCTACTGGTGCTTGCCTCGC
CGAGCCCCTCCGTGCGTGTTCGAAGGAAGCTCTGATTTGACGCTCACAGA
GCGATTCATGGTCTGAAACCCGCAACGGCACTAGTCATGAGTAGTGGATA
TCCTCGCCTCTGGTTTGTTTCGTCTGGGATGGTGACTGTGAGCTACAAGG
GCTGGCGCGCCGGTGCGAGCGTGTGCCTCGACAGGGCGGGGCATTTGGTA
GGGGGTCTTTTTTTTGCGTGTTTTCGTCTGCAGGGCCACTCCAGCAGTTT
GTTGACGCCGTAAATTGTTCGTACTCCACCACTAGAGCATCGATTCGCTT
GGTTCTTCTTGCTCAACATTCGACAGGTATCAGTACAAGTCTGAGCTTGC
TGCGTTGCAAAATCTGTATTCGGCTGAGAGCACTTATCAAGAAAGAGCTC
ATTTCCGCGCCTCCTTGAAAACGATTCCGAATATCACTGAAACATCAAAA
GCAGTACATATATTTATTCTCACCCCCCCCCCCCCGTCTTTATTCGAAAC
ATCGTCGATACTTCTGTGCACGTTATCTGTTCTCTCCCGCAGGCAGCATC
GTCTTGCTATTTTAGAGGGGGGGGGGCTAGTTTAATTCATGCGTATCATA
TGTACAAGTATGCTAACGAGTTTGGGGTCGAAATAGTGAAATAGATAACT
TTGGCAGAGCTCTTCTGCATGGCCCGCTCTTTAGCAGCTCTTCTTGTGTA
CCTTATGTCGGCTACCATACATACCACGGTATCATGTTTACCAAACATGC
TTTCCAGGAAAGGGGAAAGAGACGCGCACGATCGTCTCCCTCTGTGTGTG
CGACCCTCTACGATGGACCGTCTGTGGACCTCATACGTCTCTTTTCTGCT
CGTGGGGTTAGTCGGGGGGCTTTCCCAACACAAGAAATAAATGCACAACA
TGCAAGATAGCCATCCCGCAGTAAAAAATTGCGCGAACAAAAAATGGCGG
CCGAAAGGAAAGGAACACACGCACACACGCAGCAGTTGGCAGTTGGCGAA
GGACTGCACTACGATCACCTCCTCTTTTTGGAGGCGACATGCCCCACCCA
CCCGGCACGAATCATTGAGCGAGCAAGCCTCTTCGCGGGTTTAACCCTAT
AAAAGCCATTTACCACAGCAGCAGCAGCAGCAGCAGTGTGAGATTCTAGC
ACGCTCTCTTTTTTTTTTGGGAAAACGACGCAACAGGGTATATACCCTGG
TAGAACCACGGCATAGCTGGGTAAATACCCCTTTCCACAGACATTACACG
CGCATTGCTGATTGGCCAGCGCCACCGTTGACCCGGTTCTGGCGCCGTTC
GCCCATGGGTATACCCTGCTGCGTCTTTCTGTGTCCCAAATTGTACCCTG
CTGCTCCCGACCTGTACCCTGTTCAGACGGGAAATTGCCCCGCACTAAGA
CTCTTCTGCCCACTGTACGGCACATCAAACCACAGCCATGGCACAACACC
CCGCGTTTGATGTTACCAACGGACAAACATATGGGATAACCGAAGAAGTC
GGCGGCGCACAATACGGCGTAACAAACCACAACCATGGCATAAACACACA
CATATGGGATATCCCAGGTCGAGTCGGCGCACAAACATAGCCATCGCAAA
ACACCCGGCGTTATTTACACACACATACGATGTACTTACTGTATGGGATA
TGTATGTATGGGATATCCCAAGTCGGGCAGAACCCGGCGTAACAAACCAC
AGCCAGCCCATGGCAATACGCAAAGGACACCGGTGACACACGCGTCAGCA
TCCACTTCACACCCACACACACACACACACAAACCACACACTCCGGCGCC
CATGGAAGGAGGCGTTACCTACCATCTACCTGCCATTTAACTAGGCTACA
ACCACCTTGTTTTTCAAAACCACAAGGCCCATGGGAGAGAGCTGATGAAG
TGTGGCTGTGGCGTTGGATGCTGACGCGTCGGCTCTTTAACACGGGATGT
TTTGCGATGGCTGTGTCTATGCGCCGACTCGACCTGGGATATCCCATATG
TATGTAGGTGTATGTTGTCTTCACATTAAAAACCGTTCCGATCTCTCCAT
CCAGTACCTCTCAATGTCCGTACTAATCCAACACTTGATGCGGTCAATTC
CCGTGGTCACAGGCTAACTTATACCTAAGAAAAGGTACACGAAAAATAAA
ATGGACCCGAAGGGCCAGCAAAGCAATACTACGAAGTAATATATAACAGA
TATCGAGTCTGGAGCCCTTCGCTCCCCTCTACACGCTATGTGAGGTAAAA
ACAAAACTGGAACAACCAACACCACCACTATCTTGGTACCCCAACATGTG
TGTGTTTATGCCATGGTTGTGGTTTGTTACGCCGTGTTGTGCGCCGCCAA
CTTCTTCGGTTATCCCATATGTTTGTCCGTTGGTAACATCAAACGCGGGG
TGTTGTGCCATGGCTGTGGTTTGATGTGCCGTACAGTGGGCAGAAGAGTC
TTAGTGCAGGGCAATTTCCCGTCTGAACAGGGTACAGATCGGGAACAGCA
GGGTACAATTTGGGACAAAGAAAGACGCAGCAGGGTATACCCATGGGCGA
ACGGCGCCAGAACCGGGTCAATGGTGGCGCTGGCCAATCAGCAATGCGCG
TGTAAATGTCTGTGGAAAGGGGTACCCGGCTATGCCGTGGTTCTACCAGG
GTATATACCCTGTTGCGTCGTTTTCCCTTTTTTTGTGTTGTGTGTGGGTT
ACATACATGAGCGCCTGCCTCCACATCATTAGCGCGATTTGTATCATACG
ATGTAGGTCTGTGGGCTGGCTAATTAGATACGTCGAGGGAGGTCTGCATG
CGAGTCGCGGCTGTGTCGTATGGTGTAGCCTCTTCTCGCCACAGCCGAAA
CAAGAGTAACAACAAAGTGTTCGGTTATGTTCGTGGTTGAGCTTCAGAGG
CCAGAGGATGTTGTTAACCGCATGTATTAGCTCGTAGAGGAGACATGAGA
GAGAGATGGGAAGGAGAGGAGAGTGAGCCCAAAACGCTCGAGAAAGGGGG
CTCTGCACTCACACCCAAAAGGCTCTCAATGCATACCGTCAAGGTTCTTC
CTATCTGCGTCATACGAAACGCCAGAGTAACAACAACAGCACCAGCACCA
GTAGGCACAAAAGCGCCCAAAATTACAACCAACAGACCGGACACAACGTA
CTAACATATACTTCGTATGTAACATTGGCATCTGTAACATTTGACAGGCG
GGACACCATTGCCCCGCGCAACGACACGGAGAAGCGCGTGTACGAGGCCC
TCTCGAACAAAAACTGGGGTGCTTCGAGTACCCTGCTCAACGACATCGCC
AGGGACACCTACGACTT GTGAGACACAAACACGCGCGCGAGAACCGCGTG
ACACGAATCCCCATCGCCATAAAATACGTGACTGTGTTGTGCAGACACAT
GCCATCTTCCGTAGTTGATGGTCCGGGTGGTGGCGGTATTCACCCAATGC
CGGGGGCGGCTAGTTTCCTTCCGCGATGACTAGGCAAAGGAGAGAGAAGT
CCACGCGCGAGAGTGCCGACAATGGGCGGAGCAACTAACTCGGGTCCCCT
TGTCGGCCCAACGGGTCGATGAGATATCCTTTCTAAGATCCTATCCGTAC
TGCTACTGTATTACTTTGTATGTGCACCTGGTTCTCATACCTTACACCTG
TCGTCCACAATTACATTTATTCTTTAGTGTGTGTGTGTGTGTTGATCGCT
TGCCTCTCCCTTCGCGTCAAGACGCGTGTACACAGGCAGGCATTGCGGCT
CACACGAAGTAGGAGTGCATGCACAGTTTCTCGTACGCGGACATACATGT
GTACAGTTGGCTGGGAATATTTTGATATTTTCGTCTTTGGGTCTCGGCGT
CGAAGCTATGTACCCACAAGAGCAGAAGTCGCCGGTGCCCCTGCGCCCTT
TCTCTCTCCCCCCCACCCCCCCCCCACCCCCCGCCCCCCGCCCCCCACAA
AACGTTGAGGGCACTGGGTGCAAAACTTCTGTTCGTTGAAGAACGCTTCC
TTTCTTCGCGTTGGCTATGTCCTATGTAGCTTAATACTTACCGTAGGTGA
CATAAGATAAGACACCCCCTTGACCGATTTTCAAAGCTCAAGTACTCAAC
AGCAAGCAGAGCGTCAGTCCCCAAAAGGACGGCGTTGGAAAGGTCTCGTC
GAGAGCTGTCCGAAAATGTGGCGTTTATGGTTAGAATCGTACTCGTTGCG
GAGTAACCAAGCTTTCAAAATCGGTCCAGGGGGTGTCTTATCTTATGTCA
CCTACGGTAATACCCCCCCCGCGCCTTGGCCGCCCCGCTGCTGTCCCCTG
CCCTGCCTTAACCCCTCAGCGAGAAGTATGGCATCGTGCTGCCGCTCATC
TGGAGCTCCCTGCAGAGCCCCAGCCGCGAGTGGAGGAAAGTTTTCAAG GT
AAATCGTGTGTGCATGCATTATATGCGTGTAGGCAGAGCTGTGTACGTTG
GTGTGACAGGCGTACATAAGACCGCCTACGCGCAGAAAATCGTCAGATTC
AGGTTCATATGTCAAATAGCAATAGAGTGAGGGGGTTCCGTAACCCAACC
CCAACCCTAACCACGACCCCCCACCCCCCATTCCTCCGATTCCATACTTT
GTCCCATATGTTTTGCTGACTCAAAACCTGCGTAGACTGCCGCGTAAATA
TACGGATGTACGAGATGCCGGCGTTGTGTGCGGCCACGCGCACCTTCTGT
CTCTCTGTGTGTGCGTGCGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGT
GTGTGTGTTTCGTCCTACCTAGCGGTGCCCCTTCTCCCTTCTCCCTCCCC
CCCCCCCCCTCTTGTCCCCAGCAGGTGGGCCACTTTTTCGGGCGGTTCTT
GTCACACGTGTAGCGTATAAGTAACGAAGTGGTGTAGGTGTGCAGTATTT
GGGACACAAAGCGCGCACACGGGGCGCCGCACGTGCGTTCGTGTAGTTTA
CTAAGATTGTAGCTACGCTCGCTAATTTTGTGGCTTGCTTTTCTTCAACC
CCGTGTCGGCGAGACAGGCGCTATCTCTCCTGGAACACCTCGTCAAGAAC
GGCGCGGAGCGTGTTATCGAGGACGCCCGCGACAACCTTCACCGCGTGCG
CATGCTAGCAGACTTCAACTATTACGAGGGGCCCGTAGATAAGGGCAGCG
GAG GTACGTGTTTTGTTTTTTGCCACTCCCCACCCCACCCCACCCCTCTT
TGCTTTCTTCCTTCCCCCCTTCTTTCTGCGAGAAATAATTTTTCGTGTTT
CTTTTTCTGCTTTGTGTGTGTGTTTGTGCTATCGTGCGCAAGGCGTTTCA
ATACCAGGTTCGGTCATTCCGTTTGCTGTCGTTGTTAAAAAGCGGTCCGT
GTGTATGTTGTTGTCTTTGGTGGCATGTTCAGGTTCAAGTCAGCCGCAAC
CACTGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGT
GCGTGTGCGTGTGTGTGCGTGTGTGTGCGTGTGTGTGCGTGTGCCTGTGT
GTCTTTGTGTGTCTGTGTGCGTGCGTGCGTGCGTTTGTGTGTGTGTCTGT
GCGTGTATGTAGTGTGTGCATGGATTTTGCTTTATGCAGGGGAGATGTTG
AACTCTCCTGATATTTTAGGTTTGTTTTTCTGTTCGTCCGCCAAATATTA
CGCCACTGGATGGAATACCGTTTGAACCCCATATCGAGTCCTCGATCTAG
TGTAGGTTATGTTCCATCTTTGATTCATTGTTTATTAAAAAAAAAAAATG
TCCATCGCTCGGCACCGCACTTTGACTCTAGCAGCGAGCCGCCCCCGCGT
GTGGTGGCATCGTATCACAGCACCGCCGTGGAGCAGCGTAGTTTTGCGAT
CGGCGCCCTGTTTCACCTCGACTCACCCGCTCCTGCTATGTATATACAAG
CTCTCGTTTCGGGCTCGGTGTAATACAGAAATCGTGCTGCCTCCGCGCCC
ACCCTTCTGCCCGTCGCCTTCCCTGTGTGGTGCCTCCCGTCTTGACCCCA
CTCTCCGACGCCGCCCGCATCCGTGTGTTTCGTTCTCGTTTTTGTTGTCT
TTCTCCTGGCTGCTGACTGCCGTAGTTCGCGAGATGTCCAAGAAAGTAAT
CGAGCTGCTGAAGGACAACGAGATGATCCGCGAAGAGCGCGAGAAGTCTC
GCAAGCTCCGGGACAAGTACGTCGGGCTCGGCGGCGGCAGCGGCGCCTTT
AGTGGCGGCGGCGGGGGCGGAGGGTACAGCGGCGGCGGCGGTGGTTACAG
CGGCGGCGGTGGCGGTGGATACAGCGGCGGCGGCGGTGGTGGTTACAGCG
GGGGCGGCGGTGGCTACAGCGGAGGAGGAGGCGCTAGCTCTCGATATGGC
back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1957:7779..15428+
>mRNA_L-elsbetiae_contig1957.5828.1 ID=mRNA_L-elsbetiae_contig1957.5828.1|Name=mRNA_L-elsbetiae_contig1957.5828.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1362bp|location=Sequence derived from alignment at L-elsbetiae_contig1957:7779..15428+ (Laminarionema elsbetiae ELsaHSoW15) ATGGACAAGCTAGGGCAGCTTTCGCTGGACAAGCTGTCTCTGGACAAGGT CAAGAACCTTGTCGGCGAAGTATGGACAAGCTAGGGCAGCTTTCGCTGGA CAAGCTGTCTCTGGACAAGGTCAAGAACCTTGTCGGCGAAGTGCGGGACA CCATTGCCCCGCGCAACGACACGGAGAAGCGCGTGTACGAGGCCCTCTCG AACAAAAACTGGGGTGCTTCGAGTACCCTGCTCAACGACATCGCCAGGGA CACCTACGACTTGCGGGACACCATTGCCCCGCGCAACGACACGGAGAAGC GCGTGTACGAGGCCCTCTCGAACAAAAACTGGGGTGCTTCGAGTACCCTG CTCAACGACATCGCCAGGGACACCTACGACTTCGAGAAGTATGGCATCGT GCTGCCGCTCATCTGGAGCTCCCTGCAGAGCCCCAGCCGCGAGTGGAGGA AAGTTTTCAAGCGAGAAGTATGGCATCGTGCTGCCGCTCATCTGGAGCTC CCTGCAGAGCCCCAGCCGCGAGTGGAGGAAAGTTTTCAAGGCGCTATCTC TCCTGGAACACCTCGTCAAGAACGGCGCGGAGCGTGTTATCGAGGACGCC CGCGACAACCTTCACCGCGTGCGCATGCTAGCAGACTTCAACTATTACGA GGGGCCCGTAGATAAGGGCAGCGGAGGCGCTATCTCTCCTGGAACACCTC GTCAAGAACGGCGCGGAGCGTGTTATCGAGGACGCCCGCGACAACCTTCA CCGCGTGCGCATGCTAGCAGACTTCAACTATTACGAGGGGCCCGTAGATA AGGGCAGCGGAGTTCGCGAGATGTCCAAGAAAGTAATCGAGCTGCTGAAG GACAACGAGATGATCCGCGAAGAGCGCGAGAAGTCTCGCAAGCTCCGGGA CAAGTACGTCGGGCTCGGCGGCGGCAGCGGCGCCTTTAGTGGCGGCGGCG GGGGCGGAGGGTACAGCGGCGGCGGCGGTGGTTACAGCGGCGGCGGTGGC GGTGGATACAGCGGCGGCGGCGGTGGTGGTTACAGCGGGGGCGGCGGTGG CTACAGCGGAGGAGGAGGCGCTAGCTCTCGATATGGCTTCGCGAGATGTC CAAGAAAGTAATCGAGCTGCTGAAGGACAACGAGATGATCCGCGAAGAGC GCGAGAAGTCTCGCAAGCTCCGGGACAAGTACGTCGGGCTCGGCGGCGGC AGCGGCGCCTTTAGTGGCGGCGGCGGGGGCGGAGGGTACAGCGGCGGCGG CGGTGGTTACAGCGGCGGCGGTGGCGGTGGATACAGCGGCGGCGGCGGTG GTGGTTACAGCGGGGGCGGCGGTGGCTACAGCGGAGGAGGAGGCGCTAGC TCTCGATATGGC back to top