mRNA_L-elsbetiae_contig1955.5816.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 129 bits (324), Expect = 1.950e-31 Identity = 143/224 (63.84%), Postives = 169/224 (75.45%), Query Frame = 2 Query: 71 HMAAGRGHFNIVRVAIEHGADVDAVDIRQKTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAVLKAGTLGAAEMVDNLLRSGADETILNNEGKAAADIVAEDVDEEDQIAENVERVCELLANAPADRAWRRRGYLVLCRSQAN-IMQQIGGIGSTPAGMARRTHSDAVRVRTAAIGCDETAEGS 739 H AA GH I+R IEHGADVDAVD +Q+TA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A +AG GAAE+V++LLR+GADETI N +G A D++ EDV+EED++ E+VERV ELLANAPADRAWRRRGYL++CR+Q + + ++ G+ +ARRT S A R I + T + S Sbjct: 149 HAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDES 372
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 7.740e-18 Identity = 69/204 (33.82%), Postives = 86/204 (42.16%), Query Frame = 2 Query: 26 ADVSLRCGEEGRSVVHMAAGRGHFNIVRVAIEHGADVDAVDIRQKTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---YAVLKAGTLGAAEMVDNLLRSGADETILNNEGKAAADIVAEDVDEEDQIAENVERVCELLANAPADRAWRRRGYLVLCRSQANIMQ 628 AD++ R G+ S + + AG GH + +R IEHGADVDA + AL Y +AG G E+VD LLR GADET + G AAD + V EED+I E E V +LLANAPADRAWRRR LVLCR++ + MQ Sbjct: 150 ADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQ 353
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 8.820e-17 Identity = 54/103 (52.43%), Postives = 69/103 (66.99%), Query Frame = 2 Query: 383 KAGTLGAAEMVDNLLRSGADETILNNEGKAAADIVAEDVDEEDQIAENVERVCELLANAPADRAWRRRGYLVLCRSQ--ANIMQQIGGIGSTPA-GMARRTHS 682 KAG+ G AEMVD LLR GADET ++ G AAD+V +E D +AE+V+RV +LLA APADRAWRRRG+L+L R+ +Q PA G+A+RT S Sbjct: 632 KAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRS 734
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 4.390e-16 Identity = 61/129 (47.29%), Postives = 77/129 (59.69%), Query Frame = 2 Query: 386 AGTLGAAEMVDNLLRSGADETILNNEGKAAADIVAEDVDEEDQI-AENVERVCELLANAPADRAWRRRGYLVLCRS---QANIMQQIGGIGSTPAGMARRTHSDAVRVRTAAIGCD---ETAEGSMVDE 751 AG G+AE+VD LLR GADET + G+ AD V ++ D + V V ELLANAPADRAWRRRG LVLCR+ ++ + Q+ GG T G++RRT S A R+ A+G T EG DE Sbjct: 272 AGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGG--DTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDE 398
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 3.910e-14 Identity = 55/137 (40.15%), Postives = 79/137 (57.66%), Query Frame = 2 Query: 374 AVLKAGTLGAAEMVDNLLRSGADETILNNEGKAAADIVAEDVDEE--DQIAENVERVCELLANAPADRAWRRRGYLVLCRSQANIMQQIGGIGSTPAGMARRTHSDAVRVRTAAIGCDETAEGSMVDEGTRRD*ADV 778 A +AG G +VD LLR GADET LN +G+ AA++V ++ +++ERV +LL NAPADRAWRRRG LVLCR+ +++ S+ G+ R S ++ VR + G E E D+G R+ D+ Sbjct: 261 AARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSSARGIGPRAMSVSIGVRVSVAG-GELREDD--DKGRRKQGCDL 394
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 4.200e-14 Identity = 44/79 (55.70%), Postives = 56/79 (70.89%), Query Frame = 2 Query: 374 AVLKAGTLGAAEMVDNLLRSGADETILNNEGKAAADIVAEDVDEEDQIAENVERVCELLANAPADRAWRRRGYLVLCRS 610 A AG G E+VD+LLRSGADETIL++EG+AA D+++ +V E +RV +LL NA ADRAW RR YLVLCR+ Sbjct: 91 ATAVAGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRT 169
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: A0A6H5JFR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR1_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 1.060e-12 Identity = 106/229 (46.29%), Postives = 136/229 (59.39%), Query Frame = 2 Query: 2 ARTLLTAGADVSLRCGEEGRSVVHMAAGRGHFNIVRVAIEHGADVDAVDIRQKTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAVLKAGTLGAAEMVDNLLRSGADETILNNEGKAAADIVAEDVDEEDQIAENVERVCELLANAPADRAWRRRGYLVLCRSQANIMQQIGGIGSTPAGMARRTHSDA 688 AR L+ AGA++++RCG R+V+ +AA +G +I+R +++GADV AVD + AL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L + +VD LLR GA ETI++ K AA ++ + + ERV +LL NAPADRAWRRRG+L+LCR+ + ST AR TH++A Sbjct: 59 ARALMAAGAEINVRCGLSKRTVLSLAAEKGDVDILRALVKNGADVTAVDNDRDMALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAV-----------------------VALSKRARRTSAVVDLLLRLGAHETIVDKRKKNAAGLLKKSW-WSCLYPGDAERVYKLLRNAPADRAWRRRGFLLLCRAYPERVPPRLDSSSTLVDAARTTHNEA 263
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 2.540e-12 Identity = 47/116 (40.52%), Postives = 66/116 (56.90%), Query Frame = 2 Query: 374 AVLKAGTLGAAEMVDNLLRSGADETILNNEGKAAADIVAEDVDEE--DQIAENVERVCELLANAPADRAWRRRGYLVLCRSQANIMQQIGGIGSTPAGMARRTHSDAVRVRTAAIG 715 A +AG G +VD LLR GADET LN +G+ AA++V ++ ++VERV +LL NAP DRAWRRRG+LVLCR+ +++ S + R S + R + G Sbjct: 212 AARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNASSNGPRVRSLSTGARISGAG 327
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 73.6 bits (179), Expect = 2.440e-11 Identity = 45/93 (48.39%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 398 GAAEMVDNLLRSGADETILNNEGKAAADIVA----EDVDEEDQIAENVERVCELLANAPADRAWRRRGYLVLCRSQANIMQQIGGIGSTPAGM 664 G+A++VD LLR GADETI++ +G+ AAD + D ED ER LLA APADRAWRRRG LVLCR+ + +Q G + AG+ Sbjct: 288 GSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTDPEDD-----ERARSLLARAPADRAWRRRGLLVLCRAHPDRLQLGGDLAGLVAGV 375
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 69.3 bits (168), Expect = 8.420e-10 Identity = 48/121 (39.67%), Postives = 72/121 (59.50%), Query Frame = 2 Query: 410 MVDNLLRSGADETILNNEGKAAADIVA----EDVDEEDQIAENVERVCELLANAPADRAWRRRGYLVLCRSQANIMQQIGGIGSTPAGMARRTHSDAVRVRTAAIGC----DETAEGSMVD 748 +V+ LLR GADE + NN+G AD+V D+D+E++ A+N +R+ +LA APADR+WRRRG+LVL RS + G S+ + ++R + A R + G +ET + MVD Sbjct: 369 VVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADN-QRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANG-SSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVD 487 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1955.5816.1 >prot_L-elsbetiae_contig1955.5816.1 ID=prot_L-elsbetiae_contig1955.5816.1|Name=mRNA_L-elsbetiae_contig1955.5816.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp MAAGRGHFNIVRVAIEHGADVDAVDIRQKTALHNAACSGEVEAIDVLLQAback to top mRNA from alignment at L-elsbetiae_contig1955:8810..9595+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1955.5816.1 ID=mRNA_L-elsbetiae_contig1955.5816.1|Name=mRNA_L-elsbetiae_contig1955.5816.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=786bp|location=Sequence derived from alignment at L-elsbetiae_contig1955:8810..9595+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1955:8810..9595+ >mRNA_L-elsbetiae_contig1955.5816.1 ID=mRNA_L-elsbetiae_contig1955.5816.1|Name=mRNA_L-elsbetiae_contig1955.5816.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1392bp|location=Sequence derived from alignment at L-elsbetiae_contig1955:8810..9595+ (Laminarionema elsbetiae ELsaHSoW15)back to top |