mRNA_L-elsbetiae_contig1955.5816.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1955.5816.1
Unique NamemRNA_L-elsbetiae_contig1955.5816.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 1.950e-31
Identity = 143/224 (63.84%), Postives = 169/224 (75.45%), Query Frame = 2
Query:   71 HMAAGRGHFNIVRVAIEHGADVDAVDIRQKTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAVLKAGTLGAAEMVDNLLRSGADETILNNEGKAAADIVAEDVDEEDQIAENVERVCELLANAPADRAWRRRGYLVLCRSQAN-IMQQIGGIGSTPAGMARRTHSDAVRVRTAAIGCDETAEGS 739
            H AA  GH  I+R  IEHGADVDAVD +Q+TA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          A  +AG  GAAE+V++LLR+GADETI N +G  A D++ EDV+EED++ E+VERV ELLANAPADRAWRRRGYL++CR+Q + + ++    G+    +ARRT S A   R   I  + T + S
Sbjct:  149 HAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDES 372          
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 7.740e-18
Identity = 69/204 (33.82%), Postives = 86/204 (42.16%), Query Frame = 2
Query:   26 ADVSLRCGEEGRSVVHMAAGRGHFNIVRVAIEHGADVDAVDIRQKTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---YAVLKAGTLGAAEMVDNLLRSGADETILNNEGKAAADIVAEDVDEEDQIAENVERVCELLANAPADRAWRRRGYLVLCRSQANIMQ 628
            AD++ R G+   S + + AG GH + +R  IEHGADVDA +     AL                                                                      Y   +AG  G  E+VD LLR GADET +   G  AAD +   V EED+I E  E V +LLANAPADRAWRRR  LVLCR++ + MQ
Sbjct:  150 ADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQ 353          
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 8.820e-17
Identity = 54/103 (52.43%), Postives = 69/103 (66.99%), Query Frame = 2
Query:  383 KAGTLGAAEMVDNLLRSGADETILNNEGKAAADIVAEDVDEEDQIAENVERVCELLANAPADRAWRRRGYLVLCRSQ--ANIMQQIGGIGSTPA-GMARRTHS 682
            KAG+ G AEMVD LLR GADET ++  G  AAD+V    +E D +AE+V+RV +LLA APADRAWRRRG+L+L R+      +Q        PA G+A+RT S
Sbjct:  632 KAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRS 734          
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 4.390e-16
Identity = 61/129 (47.29%), Postives = 77/129 (59.69%), Query Frame = 2
Query:  386 AGTLGAAEMVDNLLRSGADETILNNEGKAAADIVAEDVDEEDQI-AENVERVCELLANAPADRAWRRRGYLVLCRS---QANIMQQIGGIGSTPAGMARRTHSDAVRVRTAAIGCD---ETAEGSMVDE 751
            AG  G+AE+VD LLR GADET  +  G+  AD V   ++  D +    V  V ELLANAPADRAWRRRG LVLCR+   ++ + Q+ GG   T  G++RRT S A   R+ A+G      T EG   DE
Sbjct:  272 AGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGG--DTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDE 398          
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 3.910e-14
Identity = 55/137 (40.15%), Postives = 79/137 (57.66%), Query Frame = 2
Query:  374 AVLKAGTLGAAEMVDNLLRSGADETILNNEGKAAADIVAEDVDEE--DQIAENVERVCELLANAPADRAWRRRGYLVLCRSQANIMQQIGGIGSTPAGMARRTHSDAVRVRTAAIGCDETAEGSMVDEGTRRD*ADV 778
            A  +AG  G   +VD LLR GADET LN +G+ AA++V   ++        +++ERV +LL NAPADRAWRRRG LVLCR+     +++    S+  G+  R  S ++ VR +  G  E  E    D+G R+   D+
Sbjct:  261 AARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSSARGIGPRAMSVSIGVRVSVAG-GELREDD--DKGRRKQGCDL 394          
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 4.200e-14
Identity = 44/79 (55.70%), Postives = 56/79 (70.89%), Query Frame = 2
Query:  374 AVLKAGTLGAAEMVDNLLRSGADETILNNEGKAAADIVAEDVDEEDQIAENVERVCELLANAPADRAWRRRGYLVLCRS 610
            A   AG  G  E+VD+LLRSGADETIL++EG+AA D+++ +V       E  +RV +LL NA ADRAW RR YLVLCR+
Sbjct:   91 ATAVAGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRT 169          
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: A0A6H5JFR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR1_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.060e-12
Identity = 106/229 (46.29%), Postives = 136/229 (59.39%), Query Frame = 2
Query:    2 ARTLLTAGADVSLRCGEEGRSVVHMAAGRGHFNIVRVAIEHGADVDAVDIRQKTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAVLKAGTLGAAEMVDNLLRSGADETILNNEGKAAADIVAEDVDEEDQIAENVERVCELLANAPADRAWRRRGYLVLCRSQANIMQQIGGIGSTPAGMARRTHSDA 688
            AR L+ AGA++++RCG   R+V+ +AA +G  +I+R  +++GADV AVD  +  AL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                             L       + +VD LLR GA ETI++   K AA ++ +          + ERV +LL NAPADRAWRRRG+L+LCR+    +       ST    AR TH++A
Sbjct:   59 ARALMAAGAEINVRCGLSKRTVLSLAAEKGDVDILRALVKNGADVTAVDNDRDMALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAV-----------------------VALSKRARRTSAVVDLLLRLGAHETIVDKRKKNAAGLLKKSW-WSCLYPGDAERVYKLLRNAPADRAWRRRGFLLLCRAYPERVPPRLDSSSTLVDAARTTHNEA 263          
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 2.540e-12
Identity = 47/116 (40.52%), Postives = 66/116 (56.90%), Query Frame = 2
Query:  374 AVLKAGTLGAAEMVDNLLRSGADETILNNEGKAAADIVAEDVDEE--DQIAENVERVCELLANAPADRAWRRRGYLVLCRSQANIMQQIGGIGSTPAGMARRTHSDAVRVRTAAIG 715
            A  +AG  G   +VD LLR GADET LN +G+ AA++V   ++        ++VERV +LL NAP DRAWRRRG+LVLCR+     +++    S  +    R  S +   R +  G
Sbjct:  212 AARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNASSNGPRVRSLSTGARISGAG 327          
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 2.440e-11
Identity = 45/93 (48.39%), Postives = 58/93 (62.37%), Query Frame = 2
Query:  398 GAAEMVDNLLRSGADETILNNEGKAAADIVA----EDVDEEDQIAENVERVCELLANAPADRAWRRRGYLVLCRSQANIMQQIGGIGSTPAGM 664
            G+A++VD LLR GADETI++ +G+ AAD +        D ED      ER   LLA APADRAWRRRG LVLCR+  + +Q  G +    AG+
Sbjct:  288 GSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTDPEDD-----ERARSLLARAPADRAWRRRGLLVLCRAHPDRLQLGGDLAGLVAGV 375          
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 8.420e-10
Identity = 48/121 (39.67%), Postives = 72/121 (59.50%), Query Frame = 2
Query:  410 MVDNLLRSGADETILNNEGKAAADIVA----EDVDEEDQIAENVERVCELLANAPADRAWRRRGYLVLCRSQANIMQQIGGIGSTPAGMARRTHSDAVRVRTAAIGC----DETAEGSMVD 748
            +V+ LLR GADE + NN+G   AD+V      D+D+E++ A+N +R+  +LA APADR+WRRRG+LVL RS    +    G  S+ + ++R   + A   R +  G     +ET +  MVD
Sbjct:  369 VVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADN-QRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANG-SSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVD 487          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1955.5816.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXK5_9PHAE1.950e-3163.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL4_ECTSI7.740e-1833.82Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5JHY9_9PHAE8.820e-1752.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYD0_ECTSI4.390e-1647.29Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5KNU3_9PHAE3.910e-1440.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMJ6_9PHAE4.200e-1455.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFR1_9PHAE1.060e-1246.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6X8_ECTSI2.540e-1240.52Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7G1U1_ECTSI2.440e-1148.39Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LQN0_ECTSI8.420e-1039.67Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1955contigL-elsbetiae_contig1955:8810..9595 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score99.8
Seed ortholog evalue1.8e-18
Seed eggNOG ortholog2880.D7FKL4
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons1
Model size786
Cds size696
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1955.5816.1prot_L-elsbetiae_contig1955.5816.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1955 8883..9578 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815811.0319588-UTR-L-elsbetiae_contig1955:8809..88821622815811.0319588-UTR-L-elsbetiae_contig1955:8809..8882Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1955 8810..8882 +
1691683117.9844966-UTR-L-elsbetiae_contig1955:8809..88821691683117.9844966-UTR-L-elsbetiae_contig1955:8809..8882Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1955 8810..8882 +
1622815811.0569873-UTR-L-elsbetiae_contig1955:9578..95951622815811.0569873-UTR-L-elsbetiae_contig1955:9578..9595Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1955 9579..9595 +
1691683118.0051806-UTR-L-elsbetiae_contig1955:9578..95951691683118.0051806-UTR-L-elsbetiae_contig1955:9578..9595Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1955 9579..9595 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815811.0451758-CDS-L-elsbetiae_contig1955:8882..95781622815811.0451758-CDS-L-elsbetiae_contig1955:8882..9578Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1955 8883..9578 +
1691683117.9960463-CDS-L-elsbetiae_contig1955:8882..95781691683117.9960463-CDS-L-elsbetiae_contig1955:8882..9578Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1955 8883..9578 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1955.5816.1

>prot_L-elsbetiae_contig1955.5816.1 ID=prot_L-elsbetiae_contig1955.5816.1|Name=mRNA_L-elsbetiae_contig1955.5816.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp
MAAGRGHFNIVRVAIEHGADVDAVDIRQKTALHNAACSGEVEAIDVLLQA
GANMEARDDEGCAPLHDATYQLSLGVVLALLKHGADVNAETMAQETPLHY
AVLKAGTLGAAEMVDNLLRSGADETILNNEGKAAADIVAEDVDEEDQIAE
NVERVCELLANAPADRAWRRRGYLVLCRSQANIMQQIGGIGSTPAGMARR
THSDAVRVRTAAIGCDETAEGSMVDEGTRRD*
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mRNA from alignment at L-elsbetiae_contig1955:8810..9595+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1955.5816.1 ID=mRNA_L-elsbetiae_contig1955.5816.1|Name=mRNA_L-elsbetiae_contig1955.5816.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=786bp|location=Sequence derived from alignment at L-elsbetiae_contig1955:8810..9595+ (Laminarionema elsbetiae ELsaHSoW15)
CGCACGAACTCTCCTGACTGCCGGCGCGGACGTCAGCCTTCGGTGCGGCG AAGAAGGGAGGTCGGTAGTGCACATGGCGGCTGGACGGGGGCATTTTAAC ATCGTGAGAGTGGCGATCGAGCACGGGGCAGACGTGGATGCTGTTGACAT ACGCCAAAAAACAGCCTTGCACAATGCTGCATGTTCCGGCGAGGTGGAGG CGATCGATGTGCTCTTGCAGGCTGGTGCCAATATGGAAGCCCGGGATGAT GAGGGTTGTGCCCCTCTGCATGATGCCACCTACCAGCTTAGTCTCGGAGT CGTGTTGGCCCTCTTGAAGCATGGTGCGGACGTCAACGCCGAAACCATGG CGCAAGAAACACCGTTGCACTATGCAGTACTCAAAGCTGGAACACTAGGA GCTGCCGAGATGGTGGACAATCTGCTGAGGTCAGGTGCGGACGAGACCAT CCTCAACAACGAAGGCAAAGCAGCCGCGGATATTGTGGCGGAGGACGTCG ATGAAGAAGATCAAATAGCCGAGAATGTCGAGCGTGTGTGCGAGCTGTTG GCAAATGCTCCAGCCGACAGAGCATGGCGTCGCCGGGGCTACCTGGTGCT GTGTCGCTCTCAGGCGAACATCATGCAGCAGATAGGTGGCATCGGCAGCA CGCCTGCTGGCATGGCACGGAGAACTCACAGCGATGCTGTTCGGGTAAGA ACGGCTGCGATTGGCTGCGATGAGACAGCCGAAGGTAGCATGGTGGATGA AGGGACTAGGCGGGACTGAGCCGATGTGTTCGCGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1955:8810..9595+

>mRNA_L-elsbetiae_contig1955.5816.1 ID=mRNA_L-elsbetiae_contig1955.5816.1|Name=mRNA_L-elsbetiae_contig1955.5816.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1392bp|location=Sequence derived from alignment at L-elsbetiae_contig1955:8810..9595+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGGCTGGACGGGGGCATTTTAACATCGTGAGAGTGGCGATCGAGCA
CGGGGCAGACGTGGATGCTGTTGACATACGCCAAAAAACAGCCTTGCACA
ATGCTGCATGTTCCGGCGAGGTGGAGGCGATCGATGTGCTCTTGCAGGCT
GGTGCCAATATGGAAGCCCGGGATGATGAGGGTTGTGCCCCTCTGCATGA
TGCCACCTACCAGCTTAGTCTCGGAGTCGTGTTGGCCCTCTTGAAGCATG
GTGCGGACGTCAACGCCGAAACCATGGCGCAAGAAACACCGTTGCACTAT
GCAGTACTCAAAGCTGGAACACTAGGAGCTGCCGAGATGGTGGACAATCT
GCTGAGGTCAGGTGCGGACGAGACCATCCTCAACAACGAAGGCAAAGCAG
CCGCGGATATTGTGGCGGAGGACGTCGATGAAGAAGATCAAATAGCCGAG
AATGTCGAGCGTGTGTGCGAGCTGTTGGCAAATGCTCCAGCCGACAGAGC
ATGGCGTCGCCGGGGCTACCTGGTGCTGTGTCGCTCTCAGGCGAACATCA
TGCAGCAGATAGGTGGCATCGGCAGCACGCCTGCTGGCATGGCACGGAGA
ACTCACAGCGATGCTGTTCGGGTAAGAACGGCTGCGATTGGCTGCGATGA
GACAGCCGAAGGTAGCATGGTGGATGAAGGGACTAGGCGGGACTGAATGG
CGGCTGGACGGGGGCATTTTAACATCGTGAGAGTGGCGATCGAGCACGGG
GCAGACGTGGATGCTGTTGACATACGCCAAAAAACAGCCTTGCACAATGC
TGCATGTTCCGGCGAGGTGGAGGCGATCGATGTGCTCTTGCAGGCTGGTG
CCAATATGGAAGCCCGGGATGATGAGGGTTGTGCCCCTCTGCATGATGCC
ACCTACCAGCTTAGTCTCGGAGTCGTGTTGGCCCTCTTGAAGCATGGTGC
GGACGTCAACGCCGAAACCATGGCGCAAGAAACACCGTTGCACTATGCAG
TACTCAAAGCTGGAACACTAGGAGCTGCCGAGATGGTGGACAATCTGCTG
AGGTCAGGTGCGGACGAGACCATCCTCAACAACGAAGGCAAAGCAGCCGC
GGATATTGTGGCGGAGGACGTCGATGAAGAAGATCAAATAGCCGAGAATG
TCGAGCGTGTGTGCGAGCTGTTGGCAAATGCTCCAGCCGACAGAGCATGG
CGTCGCCGGGGCTACCTGGTGCTGTGTCGCTCTCAGGCGAACATCATGCA
GCAGATAGGTGGCATCGGCAGCACGCCTGCTGGCATGGCACGGAGAACTC
ACAGCGATGCTGTTCGGGTAAGAACGGCTGCGATTGGCTGCGATGAGACA
GCCGAAGGTAGCATGGTGGATGAAGGGACTAGGCGGGACTGA
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