mRNA_L-elsbetiae_contig1945.5775.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1945.5775.1
Unique NamemRNA_L-elsbetiae_contig1945.5775.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: A0A6H5JSI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI9_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 5.350e-66
Identity = 128/275 (46.55%), Postives = 171/275 (62.18%), Query Frame = 2 
Query:    8 TKCGVTVRLGGEELRVGTSRFLSQGTFLAYKSLMAVFFMSWAIYWREAGASIVLAKLTHQTWYVAMVYFFVSSASAYLCWRAIGKGSAGGAEAALEDEEGGGDLASMGGTKTNNGCGSPVPLALRRLQLVVWNITCVVSLVVVALFWFADYNGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVGWEE-KVLYEVLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREML-HSRLREKLVAAQHIEIL 826
            T+ G TV L  E  R+GTSRFL QG F+ YK  +AV+F+ WAI+WR          LTH TWY    YF VS+ SA+LCWRAI    A G    + D +   D  +        G   PVP ALR LQL +W+  C+VSL+VV++FW A Y+G  +T+VD  AH  +A IML+DQFLVADEFKLR+V+  Q FGVIYI FN+ WYY+  ++ +++Y +LDW++  L A IY   +ILV +PLF L+H  + R RE + H+RL     AA   + +
Sbjct:    3 TRHGGTVPLDDETPRIGTSRFLPQGMFVLYKLGLAVYFLYWAIFWRAVKDYNTGRFLTHWTWYATTTYFVVSALSAFLCWRAIAVTVASGP---VRDGDPAFDAPTSSRPSDRTGSPQPVPAALRHLQLALWSTACIVSLIVVSIFWGALYDGDKLTTVDEQAHVFVACIMLLDQFLVADEFKLRYVLFPQAFGVIYIFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHFGIFRLRERVYHNRLARSSKAAAEAQAI 274
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BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: D7G733_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G733_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 4.150e-31
Identity = 89/275 (32.36%), Postives = 142/275 (51.64%), Query Frame = 2 
Query:   17 GVTVRLGG---EELRVGTSRFLSQGTFLAYKSLMAVFFMSWAIYW---REAGASIVLAKLTHQTWYVAMVYFFVSSASAYLCWRAIGKGSAGGAEAALEDEEGGGDLASMGGTKTNNGCGSPVPLALRRLQLVVWNITCVVSLVVVALFWFADYNGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYV-GWEEKVLYEVLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREMLHSRLREKLVAAQHIE 820
            G     GG   + LR GTSRFL QG F+ +K++M ++ + WA +W    +    I LA  TH    +A  YF +S  S+ LC   + +      E     EEG              G  SPVP   R LQ + W +TC+ S+VV+++FW   Y      +   ++  ++A +ML+DQFL+A E K ++  +   F V+YI +N+++YY    E++V +EV DWD +P  A ++  + +    P F+ LH+FV R RE +++  +  L   +  E
Sbjct:   21 GTRALFGGTRQQGLRAGTSRFLQQGWFVGWKAVMTIYCIVWAAWWDRGEDLDIRIYLATWTHM---LATAYFVISLISSLLCMAYLSR------EKPAPVEEG-----KPKRPPPVKGTRSPVPCYFRWLQHISWVLTCISSMVVLSVFWMTIYESDVPVTSVYVSSTILALLMLLDQFLIATEMKFKYAWLGLYFFVVYIFYNVIYYYEHNVEDRVTFEVFDWDERPGRACLWVFLILAFGVPGFTALHVFVYRLRERMYTSYKHNLEVIEEEE 281
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BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: A0A6H5JMZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ5_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 9.580e-31
Identity = 92/251 (36.65%), Postives = 136/251 (54.18%), Query Frame = 2 
Query:   41 EELRVGTSRFLSQGTFLAYKSLMAVFFMSWAIYWREAGASIVLAK--LTHQTWYVAMVYFFVSSASAY--LCWRAIGKGSAGGAEAALEDEEGGGDLASMGGTKTNNGCGSPVPLALRRLQLVVWNITCVVSLVVVALFWFADYNGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVGWE-EKVLYEVLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREMLH 778
            + +R  TSRFLSQ +FL YK +  ++F+ W  +W   G  I  A   +T+  WY+A +YF VS+A+AY  L       G   G  A          +A   G +  N   S    AL   Q+  WN+ CV SLV+V +FW A ++   +TS D+ AH +IAP+M IDQ LVA +F+ + ++ S  F ++Y+ FNIV++    E E+V+Y  +DW      +  + AV   VL PL  L+H  V R RE ++
Sbjct:   17 DPVRAVTSRFLSQRSFLCYKVIATIYFVFWCYFW-PFGEDIDDAHKFVTYWGWYMAAIYFLVSTATAYSFLGSPMASDGPVRGTHA----------VAPHRGNR--NQPLSSNRRALLGFQVFSWNVACVGSLVIVTVFWVALFDNTPLTSTDVNAHILIAPVMAIDQLLVATKFERKQMLASFLFSIVYVAFNIVFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVTFVLVPLGGLIHYCVFRLREYIY 254
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BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: A0A6H5JVA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVA0_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 5.430e-29
Identity = 71/153 (46.41%), Postives = 101/153 (66.01%), Query Frame = 2 
Query:  362 PVPLALRRLQLVVWNITCVVSLVVVALFWFADYNGGA---ITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVGWE-EKVLYE-VLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREMLHSRLREKLVA 805
            PVP  LR LQLV+WNI C+ SL+V  ++   DY       + + D+ AH ++A  ML+DQ L+AD +KL H+I +Q +G++Y+ F++VW+Y G E EK LYE  LDWD   L A + G V++ VL P+  LLHL V R RE L+ R+R+K +A
Sbjct:   92 PVPRGLRWLQLVLWNIACIASLLVTFVWATEDYVRQVRQGVKNFDVQAHGLVAFFMLVDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFYNGPEDEKYLYEDTLDWDENRLQACLSGGVAVGVLVPIAGLLHLGVFRLREALYRRVRDKEIA 244
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BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: D7FX10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX10_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 9.520e-29
Identity = 70/151 (46.36%), Postives = 98/151 (64.90%), Query Frame = 2 
Query:  362 PVPLALRRLQLVVWNITCVVSLVVVALFWFADY----NGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVGWE-EKVLYE-VLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREMLHSRLREK 796
            PVP  LR LQLV+WNI C+ SL+V  ++   DY      G   + D+ AH ++A  ML+DQ L+AD FKL H+I +Q +G++Y+ F+++W+Y G E EK LYE  LDW    L A + G V++ VL P+  LLHL V R RE L+ R+R+K
Sbjct:   10 PVPRGLRWLQLVLWNIACIASLLVTFVWASEDYVRQVRQGT-KNFDVQAHGLVAFFMLVDQLLIADTFKLGHMIFTQIYGLVYLAFSVIWFYKGPEDEKYLYEDTLDWGENRLQACLSGGVAVGVLVPIAGLLHLVVFRLREALYGRVRDK 159
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BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: D7G734_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G734_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 7.710e-27
Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 2 
Query:  350 GCGSPVPLALRRLQLVVWNITCVVSLVVVALFWFADYNGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVGWEE-KVLYEVLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREML-HSRLREKLVAA---QHIEI 823
            G   PVP  LR LQLV+W+  C+ SL+VV +FW A                     +L+DQFLVADEFKLR+++  Q FGVIY+ FN+ WYY+  ++ +++Y +LDW++  L A IY   +ILV +PLF L+HL + R RE + H+RL     AA   Q IE+
Sbjct:   10 GSPQPVPAVLRHLQLVLWSTACIGSLIVVTIFWGA---------------------LLLDQFLVADEFKLRYILFPQAFGVIYLFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHLGLFRLRESVYHNRLARTSKAAAEAQSIEL 151
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BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: D7G735_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G735_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 6.520e-21
Identity = 55/136 (40.44%), Postives = 84/136 (61.76%), Query Frame = 2 
Query:  374 ALRRLQLVVWNITCVVSLVVVALFWFADYNGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVGWE-EKVLYEVLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREMLH 778
            AL   Q+  WN+ CV SLV+V +FW A ++   +TS D+ AH +IAPIM IDQ LVA +F+ + ++ S +F ++Y+ FNI+++    E E+V+Y  +DW      +  + AV   VL PL  L+H  V R RE ++
Sbjct:   30 ALLGFQVFSWNVACVGSLVIVTVFWVALFDNTPLTSTDVNAHILIAPIMAIDQLLVATKFERKQMLASFSFSIVYVAFNIIFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVAFVLVPLGGLIHYCVFRLREYIY 165
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BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: UPI000A2A6325 (protein rolling stone n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6325)

HSP 1 Score: 60.8 bits (146), Expect = 9.060e-7
Identity = 56/236 (23.73%), Postives = 109/236 (46.19%), Query Frame = 2 
Query:   89 LAYKSLMAVFFMSWAIYWREAGAS----IVLAKLTHQTWYVAMVYFFVSSASAYLCWRAIGKGSAGGAEAALEDEEGGGDLASMGGTKTNNGCGSPVPLALRRLQLVVWNITCVVSLVVVALFWFADYNGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVGWEEKVLYEVLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREMLHSR 784
            + Y+S+  ++ +SW IY   A       +VL  LT+ +++V ++YFFVS+ S    +    +      +    D E G    + G  +             ++ Q + ++++  ++L V   FW   Y+G  +T  D+  H + +  MLID  L +   +L H+I    F  +Y++  ++ Y+    ++ +Y+  D++N PL A+    + ILV  P+    +    R R    S+
Sbjct:   35 IVYRSVFFLYSISWIIYRLIAHDRFRQVVVLFYLTNWSYFVLIIYFFVSAVSTIFEYTKQRQ-----RQVHTADAERGHAHTTEGNARW-----------FQQAQWLFYSVSATMALGVTFFFWLFVYDGTGVTLSDVNVHILNSVFMLIDHSLSSMPVRLFHMIYPMAFTXLYMIATML-YWAFISKEYIYKATDYNNNPLQAIGIFLLGILVAGPVIHTFYYATYRLRRYAASK 253
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BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: A0A0N1IPM0_PAPMA (Protein rolling stone n=9 Tax=Papilio TaxID=7145 RepID=A0A0N1IPM0_PAPMA)

HSP 1 Score: 55.8 bits (133), Expect = 4.090e-5
Identity = 42/150 (28.00%), Postives = 77/150 (51.33%), Query Frame = 2 
Query:  383 RLQLVVWNITCVVSLVVVALFWFA----------DYNGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVG----WEEKVLYEVLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREMLHSRLR 790
            ++  V++NIT  V+ ++   +W              N     ++D++ H V + +ML +  L A   +LRHV+    FG++Y++F IV+Y  G    W    +Y V+DW +KP   ++  +++ L L+ L  +L + V   R+M+  R R
Sbjct:  107 KVYWVLYNITIPVAFLITVFYWSILNTVLRTFKKKVNYAPNPTLDVMLHGVNSLVMLTELILSAHPSRLRHVMQPLYFGIVYLIFTIVYYDAGGLDPWGHVFIYPVIDW-SKPEQTLVVASLTGLFLA-LMHILTVGVATLRDMIARRCR 254
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BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: UPI0016037AC5 (protein rolling stone-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016037AC5)

HSP 1 Score: 54.7 bits (130), Expect = 7.760e-5
Identity = 40/151 (26.49%), Postives = 75/151 (49.67%), Query Frame = 2 
Query:  383 RLQLVVWNITCVVSLVVVALFWFADYNGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVGWE----EKVLYEVLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREMLHSRLREKLVAAQHIEI 823
            +L  V++N+     + +  LFW     GG  +++ IL HA+ +  ++ID  +     +L H +   TFGV+YILF ++++  G      +  +Y  LD+   P +A I   + +LV  PL   +   +   RE L   L+ +    Q++++
Sbjct:   89 KLYWVLYNVAFGGGICITILFW--ALIGGDSSALSILIHAMNSVTIVIDVMVSGLPCRLLHFVYPLTFGVVYILFTVIYWAAGGTGPDGQPYIYPFLDYGGGPALAAIVAVLGVLVAIPLCHCIVFALVVARESLVRSLKRRQSDNQNVDV 237
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5JSI9_9PHAE5.350e-6646.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G733_ECTSI4.150e-3132.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JMZ5_9PHAE9.580e-3136.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVA0_9PHAE5.430e-2946.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX10_ECTSI9.520e-2946.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G734_ECTSI7.710e-2743.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G735_ECTSI6.520e-2140.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI000A2A63259.060e-723.73protein rolling stone n=1 Tax=Exaiptasia diaphana ... [more]
A0A0N1IPM0_PAPMA4.090e-528.00Protein rolling stone n=9 Tax=Papilio TaxID=7145 R... [more]
UPI0016037AC57.760e-526.49protein rolling stone-like n=1 Tax=Branchiostoma f... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1945contigL-elsbetiae_contig1945:2275..6202 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score64.7
Seed ortholog evalue6.8e-08
Seed eggNOG ortholog6500.XP_005090227.1
Hectar predicted targeting categorysignal peptide
GOsGO:0000768,GO:0005575,GO:0006949,GO:0007520,GO:0008150,GO:0009653,GO:0009987,GO:0014902,GO:0016020,GO:0030154,GO:0032502,GO:0042692,GO:0048646,GO:0048856,GO:0048869,GO:0051146,GO:0061061
EggNOG free text desc.Protein rolling stone-like
EggNOG OGs2BZ8C@1,2S8CX@2759,3A92Y@33154,3BTZA@33208
COG Functional cat.S
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons5
Model size1262
Cds size723
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815806.9820204-UTR-L-elsbetiae_contig1945:2274..27071622815806.9820204-UTR-L-elsbetiae_contig1945:2274..2707Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1945 2275..2707 -
1691683115.2226465-UTR-L-elsbetiae_contig1945:2274..27071691683115.2226465-UTR-L-elsbetiae_contig1945:2274..2707Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1945 2275..2707 -
1622815807.0714703-UTR-L-elsbetiae_contig1945:6096..62021622815807.0714703-UTR-L-elsbetiae_contig1945:6096..6202Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1945 6097..6202 -
1691683115.292195-UTR-L-elsbetiae_contig1945:6096..62021691683115.292195-UTR-L-elsbetiae_contig1945:6096..6202Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1945 6097..6202 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815806.996165-CDS-L-elsbetiae_contig1945:2707..27771622815806.996165-CDS-L-elsbetiae_contig1945:2707..2777Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1945 2708..2777 -
1691683115.2340882-CDS-L-elsbetiae_contig1945:2707..27771691683115.2340882-CDS-L-elsbetiae_contig1945:2707..2777Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1945 2708..2777 -
1622815807.0244155-CDS-L-elsbetiae_contig1945:3569..38081622815807.0244155-CDS-L-elsbetiae_contig1945:3569..3808Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1945 3570..3808 -
1691683115.2494223-CDS-L-elsbetiae_contig1945:3569..38081691683115.2494223-CDS-L-elsbetiae_contig1945:3569..3808Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1945 3570..3808 -
1622815807.0355403-CDS-L-elsbetiae_contig1945:4344..44071622815807.0355403-CDS-L-elsbetiae_contig1945:4344..4407Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1945 4345..4407 -
1691683115.2668712-CDS-L-elsbetiae_contig1945:4344..44071691683115.2668712-CDS-L-elsbetiae_contig1945:4344..4407Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1945 4345..4407 -
1622815807.0455604-CDS-L-elsbetiae_contig1945:5281..55621622815807.0455604-CDS-L-elsbetiae_contig1945:5281..5562Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1945 5282..5562 -
1691683115.2756433-CDS-L-elsbetiae_contig1945:5281..55621691683115.2756433-CDS-L-elsbetiae_contig1945:5281..5562Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1945 5282..5562 -
1622815807.0586889-CDS-L-elsbetiae_contig1945:6026..60961622815807.0586889-CDS-L-elsbetiae_contig1945:6026..6096Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1945 6027..6096 -
1691683115.2839773-CDS-L-elsbetiae_contig1945:6026..60961691683115.2839773-CDS-L-elsbetiae_contig1945:6026..6096Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1945 6027..6096 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1945.5775.1prot_L-elsbetiae_contig1945.5775.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1945 2708..6096 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1945.5775.1

>prot_L-elsbetiae_contig1945.5775.1 ID=prot_L-elsbetiae_contig1945.5775.1|Name=mRNA_L-elsbetiae_contig1945.5775.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=241bp
MAVFFMSWAIYWREAGASIVLAKLTHQTWYVAMVYFFVSSASAYLCWRAI
GKGSAGGAEAALEDEEGGGDLASMGGTKTNNGCGSPVPLALRRLQLVVWN
ITCVVSLVVVALFWFADYNGGAITSVDILAHAVIAPIMLIDQFLVADEFK
LRHVIISQTFGVIYILFNIVWYYVGWEEKVLYEVLDWDNKPLVAVIYGAV
SILVLSPLFSLLHLFVCRRREMLHSRLREKLVAAQHIEIL*
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mRNA from alignment at L-elsbetiae_contig1945:2275..6202-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1945.5775.1 ID=mRNA_L-elsbetiae_contig1945.5775.1|Name=mRNA_L-elsbetiae_contig1945.5775.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3928bp|location=Sequence derived from alignment at L-elsbetiae_contig1945:2275..6202- (Laminarionema elsbetiae ELsaHSoW15)
GCAATTGACGAAGTGCGGCGTCACCGTCAGGCTCGGGGGGGAAGAGCTGC
GAGTGGGCACGTCGCGGTTCCTCTCACAAGGAACTTTCTTGGCCTACAAG
TCGCTGATGGCAGTGTTTTTCATGTCCTGGGCAATCTACTGGCGAGAAGC
AGGCGCGAGCATCGTTTTGGCGAAATGTGAGAAACACTTGGCCTTGTTCG
GTGGAGCTATTTATATCTGTGTTGATTTTCATGCTTGTGCCTGAGGGAGG
TCTGGTCAAGGGCGACGGAGATCTGTTCGTTGACGGAAACAATCGGAGCA
CAACGCCGTGTCCCCCGAAGGTGAACACTTTTTTCATTTTGCGCCCAAGG
AACCGGTGGTTCTTCAATGCATGCCTGTTCGTCTTTTTCTGTCTGCAGGT
GCGTTTGTGGTGCGTTTTTTGCGTGGGAATTGCTATGCTACGTATATCTC
GGCGCCTCGTGTTGGGTGAGGTCGCACGGTCACCACCTTGCCCTCATTTC
CCCCCACACGACCCCCTCTGCTGCGCTACTGCTGTCTTTTTCGATCGGCG
GTATTACCGTACTCACCTCTGCCTTTTATATACTTTAACAGCGACAACAA
TCACCCCACCCCCACTCCCATCGTCAACTTCACCGAAAAGTAACCCACCA
GACCTGGTACGTAGCAATGGTGTATTTCTTCGTCTCCTCGGCGTCGGCGT
ACCTATGCTGGAGAGCGATCGGTAAGGGGAGTGCCGGAGGTGCTGAGGCT
GCCCTCGAAGACGAAGAAGGCGGCGGGGACTTGGCCTCGATGGGGGGTAC
GAAGACCAACAATGGCTGCGGATCGCCGGTGCCGCTTGCGCTGAGGAGGC
TGCAGCTTGTGGTGTGGAACATCACCTGCGTTGTCTCCTTGGTCGTCGTC
GCCTTGTTCTGGTTCGCTGACGTGGGTAAAGCGAAATGCGGACCGTTTCA
GCGCAGGCTTGCCAGGGTCTTTGGGTGTTTATTTGCCAAGGGTGCTGTAT
TCTAGGAGCGATCGTGTCGGGGTTTCCCCCATCGTTTTTGACTTAAGTAC
CCAATTGCTTATTTTTATCCCCGTCCAAAATGTCATATTGTTGGTCAAGT
AGTTGCGTCTTCATGGTGCCGAGCCAATTATTATCGTTGCTTCAAGGACC
ATTTGGTAGGGTCACATACGCGCTGTGTGGCTTGTTAGGGTTTTCGGTGT
GGGCTTTAGCTTTTCATGTACCTCACTATTTAGGAGCTTGTGTCGACTAG
AGTATTTCCCTCCAGCGATTGACGATAACTTCGAAAGCTGGAGGAACAGG
GTGGAAATCAACGCGGGTTACTGCAGTACCTACGAACACGAGATACCCGG
AACGAACTTCGAAAAGTCGCGTGCTTTTTAAGTAGGATGTATCGTCGCAA
TGCCGTAGGTTATCATCCCATCGTTTTATCTTTAAGAGCATCTCAGCTGT
TCTCTCAACCATCGCAACCCGAGCAAAGCATCTAGCAGTAAGGAGCCATC
TCATAGACCGTCCCATGGAGATGTTATAGCAAGTTCCTACCAATAATGTC
ATTTAGGTGATATCAAACATAGGTCTGTGATTGGCCCATTGTCGCCTCAC
GTGGAAGACCCCACCCCGAGCTACCCCGACCACTATATTTCTCAAATTCG
TCGACGTTGGCCATCATCTATGAGGGCACGGAAGCGTCGGTTGTCTAATG
CACGATGTAACTGCCCCCGCCCCTTCTCCCTCTTCTTGCTTCGTTCGTCG
ATTTGAAAAATACGTTGTTGTTCTTAACGGCGCGACCTATGCCAGTACAA
TGGGGGCGCCATCACCAGCGTCGACATCCTAGCTCATGCAGTGATTGCAC
CGATCATGGTAATTTCCCCCTAATTTTTGGTTCCAGCACCGAGAAATACT
ATGTAGTGTGCAAGTCCAATGCAAGTTCCTAGATTCATGCGTGATGCCGT
TGCGTGGGAGCACAGGATACTGTAGGCGCAAACTGGTACACCTTGCAGGA
TGCTGTTTTTTATTCAGGATTGCCACATCAAGGTAGCTGTGTTTCGGAGA
TGTAGTGCCAACCTTCATATCTCCGAACCGTGCATGGGCGTATTTTCTCG
AGAGCAGCTGATGAAAACATGAGTAATATTTTTTAAACACGACAACGACA
ACGCTGCCATGTCTTTGCTTTCTCCGCGTTCTGTGGGATCAAGGCATCGA
ACATAAAACATTGTCGCAAATTGTGTCCTGGCCGTCAAAATGAAACACGA
CTGGAAACGAAGCTCCTTTCTATCCCCATCAACGCACACAAACACCACGG
AGTGAAGACACGCAACACCTCCATCTGCCCCTTATATCTCTCAATCTGCT
CCTTTTCGACCCCCTCCCCGCCCCCAACGGATGGTGTTGCTCAGCTTATC
GACCAGTTTCTAGTTGCCGATGAGTTCAAGCTACGACACGTCATCATCTC
ACAGACGTTCGGGGTGATCTACATACTCTTCAACATTGTTTGGTACTACG
TTGGGTGGGAAGAGAAAGTCCTGTACGAGGTGCTGGACTGGGACAACAAG
CCGCTCGTGGCGGTGATCTATGGGGCCGTGTCCATTCTGGTCCTGTCGCC
GCTGTTCTCGTTGCTGCATCTCTTTGTCTGCAGGTACAAGCGATTGGAGC
ACGCGTTGGCACCCATACTTCACGTTTGGTTGTTGGTTGTAAGCGATTCT
CAGCGGCTGGCGTTTTGCTTGGGTCCATGTTTTCACGCTTCTTGTATCGC
TGATGTTCACGCGCCAAACTGGGCTTCGTCCTGCACGTTTTCTGTTAAGC
CATTGCACCCACATTTTAGCAATTTTGTCTGAATTCTCTCGATGCATTCA
ACCTCATTTTCGGTCGATTTTGACGATTTGTCACTACCGTTGCCAGAGCT
GCTCTGTTTTGTACCCCAAGCGGCCGAGTAACGATGGGGTTGTCGCCGCT
CGTCAGGCCTTGTGGTAGGAGATGTCGCGCATAAACACGCGCGCGCGCGC
ACACACACACACGTGCATTTGCCGCCGAACGCTTTCCTACCTATATGGCG
TTGTTCCTGCACGCCCGGGATCGGGCTGCTTTTGATTTCGCTAGATTACT
GTCTTGAATCTGATTGCTTTACTCGGTCACAGAGAATGAGCATTTTCGCT
GCCTCCACCTGCGACAAACTAGCTCCTCCGCCCTGGTACCCCGCCCGCCC
ATGTAGTAGGCGTTCATCCCGCATGCCTTTCTCATGCTGGGTCCGATGAC
TACATTTTCTCGGATACCCGGCCATCCCCCCCTCCTGCGGAAGTGAGTGT
TCTACATGCCCTTCGTGATGCAATGCCGATTATGACCATGAATGCCGCCT
CGTCTCGCTGCGAATGCCTTGCTGTGCTTCAATTTATTGCAACTCGCGTG
ATGCCACGGCAAACGTTTCCCACAGGCGTCGCGAAATGCTCCACAGTCGT
CTCCGAGAGAAGCTGGTGGCCGCACAACATATCGAGATTTTGTAATGATG
CAGCAGCCCAACGTTTTATCTGTTGGTCTTGAGGCTGATGACTGAGCCGT
GTAGAGTGTGGAGGGCACGCCGAACTCGTTTGAAGGGGAGGTTTCGTCCT
AATTCGAAGTGACAACATCCGCGTAGCATTTGAGAACTGTCTTCGTGTAC
AGGCAACCGTTCTTGTACGTTGTGTTATTGTCTAGATACGAAGTACATAC
GTACGCTCCCCAGTCCGATGTATTTTGAACCATTTTCGGGTTCTGAACTT
CTATGTACGTACATACTTGTATATTTTTGTTTGTTCGTCGGAGCTTTTGT
GGATTTCGTGCTGCGAGTGGATCCAAGACGCCGTCATGATTACTTGGTAT
CTGCAGGAGAGACTGGCTGCTAATGTGTTGAATATGGTTGTACGTTTGTA
TTTCGCTCCTATTTTTTTCAATCGCCGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1945:2275..6202-

>mRNA_L-elsbetiae_contig1945.5775.1 ID=mRNA_L-elsbetiae_contig1945.5775.1|Name=mRNA_L-elsbetiae_contig1945.5775.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1446bp|location=Sequence derived from alignment at L-elsbetiae_contig1945:2275..6202- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCAGTGTTTTTCATGTCCTGGGCAATCTACTGGCGAGAAGCAGGCGC
GAGCATCGTTTTGGCGAAATATGGCAGTGTTTTTCATGTCCTGGGCAATC
TACTGGCGAGAAGCAGGCGCGAGCATCGTTTTGGCGAAATTAACCCACCA
GACCTGGTACGTAGCAATGGTGTATTTCTTCGTCTCCTCGGCGTCGGCGT
ACCTATGCTGGAGAGCGATCGGTAAGGGGAGTGCCGGAGGTGCTGAGGCT
GCCCTCGAAGACGAAGAAGGCGGCGGGGACTTGGCCTCGATGGGGGGTAC
GAAGACCAACAATGGCTGCGGATCGCCGGTGCCGCTTGCGCTGAGGAGGC
TGCAGCTTGTGGTGTGGAACATCACCTGCGTTGTCTCCTTGGTCGTCGTC
GCCTTGTTCTGGTTCGCTGACTAACCCACCAGACCTGGTACGTAGCAATG
GTGTATTTCTTCGTCTCCTCGGCGTCGGCGTACCTATGCTGGAGAGCGAT
CGGTAAGGGGAGTGCCGGAGGTGCTGAGGCTGCCCTCGAAGACGAAGAAG
GCGGCGGGGACTTGGCCTCGATGGGGGGTACGAAGACCAACAATGGCTGC
GGATCGCCGGTGCCGCTTGCGCTGAGGAGGCTGCAGCTTGTGGTGTGGAA
CATCACCTGCGTTGTCTCCTTGGTCGTCGTCGCCTTGTTCTGGTTCGCTG
ACTACAATGGGGGCGCCATCACCAGCGTCGACATCCTAGCTCATGCAGTG
ATTGCACCGATCATGTACAATGGGGGCGCCATCACCAGCGTCGACATCCT
AGCTCATGCAGTGATTGCACCGATCATGCTTATCGACCAGTTTCTAGTTG
CCGATGAGTTCAAGCTACGACACGTCATCATCTCACAGACGTTCGGGGTG
ATCTACATACTCTTCAACATTGTTTGGTACTACGTTGGGTGGGAAGAGAA
AGTCCTGTACGAGGTGCTGGACTGGGACAACAAGCCGCTCGTGGCGGTGA
TCTATGGGGCCGTGTCCATTCTGGTCCTGTCGCCGCTGTTCTCGTTGCTG
CATCTCTTTGTCTGCAGCTTATCGACCAGTTTCTAGTTGCCGATGAGTTC
AAGCTACGACACGTCATCATCTCACAGACGTTCGGGGTGATCTACATACT
CTTCAACATTGTTTGGTACTACGTTGGGTGGGAAGAGAAAGTCCTGTACG
AGGTGCTGGACTGGGACAACAAGCCGCTCGTGGCGGTGATCTATGGGGCC
GTGTCCATTCTGGTCCTGTCGCCGCTGTTCTCGTTGCTGCATCTCTTTGT
CTGCAGGCGTCGCGAAATGCTCCACAGTCGTCTCCGAGAGAAGCTGGTGG
CCGCACAACATATCGAGATTTTGTAAGCGTCGCGAAATGCTCCACAGTCG
TCTCCGAGAGAAGCTGGTGGCCGCACAACATATCGAGATTTTGTAA
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