prot_L-elsbetiae_contig1945.5775.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1945.5775.1
Unique Nameprot_L-elsbetiae_contig1945.5775.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length241
Homology
BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: A0A6H5JSI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI9_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 4.840e-57
Identity = 110/242 (45.45%), Postives = 150/242 (61.98%), Query Frame = 0
Query:    1 MAVFFMSWAIYWREAGASIVLAKLTHQTWYVAMVYFFVSSASAYLCWRAIGKGSAGGAEAALEDEEGGGDLASMGGTKTNNGCGSPVPLALRRLQLVVWNITCVVSLVVVALFWFADYNGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVGWEE-KVLYEVLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREML-HSRLREKLVAAQHIEIL 240
            +AV+F+ WAI+WR          LTH TWY    YF VS+ SA+LCWRAI    A G    + D +   D  +        G   PVP ALR LQL +W+  C+VSL+VV++FW A Y+G  +T+VD  AH  +A IML+DQFLVADEFKLR+V+  Q FGVIYI FN+ WYY+  ++ +++Y +LDW++  L A IY   +ILV +PLF L+H  + R RE + H+RL     AA   + +
Sbjct:   36 LAVYFLYWAIFWRAVKDYNTGRFLTHWTWYATTTYFVVSALSAFLCWRAIAVTVASGP---VRDGDPAFDAPTSSRPSDRTGSPQPVPAALRHLQLALWSTACIVSLIVVSIFWGALYDGDKLTTVDEQAHVFVACIMLLDQFLVADEFKLRYVLFPQAFGVIYIFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHFGIFRLRERVYHNRLARSSKAAAEAQAI 274          
BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: A0A6H5JVA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVA0_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 1.370e-30
Identity = 71/153 (46.41%), Postives = 101/153 (66.01%), Query Frame = 0
Query:   86 PVPLALRRLQLVVWNITCVVSLVVVALFWFADYNGGA---ITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVGWE-EKVLYE-VLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREMLHSRLREKLVA 233
            PVP  LR LQLV+WNI C+ SL+V  ++   DY       + + D+ AH ++A  ML+DQ L+AD +KL H+I +Q +G++Y+ F++VW+Y G E EK LYE  LDWD   L A + G V++ VL P+  LLHL V R RE L+ R+R+K +A
Sbjct:   92 PVPRGLRWLQLVLWNIACIASLLVTFVWATEDYVRQVRQGVKNFDVQAHGLVAFFMLVDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFYNGPEDEKYLYEDTLDWDENRLQACLSGGVAVGVLVPIAGLLHLGVFRLREALYRRVRDKEIA 244          
BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: D7FX10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX10_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 2.680e-30
Identity = 70/151 (46.36%), Postives = 98/151 (64.90%), Query Frame = 0
Query:   86 PVPLALRRLQLVVWNITCVVSLVVVALFWFADY----NGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVGWE-EKVLYE-VLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREMLHSRLREK 230
            PVP  LR LQLV+WNI C+ SL+V  ++   DY      G   + D+ AH ++A  ML+DQ L+AD FKL H+I +Q +G++Y+ F+++W+Y G E EK LYE  LDW    L A + G V++ VL P+  LLHL V R RE L+ R+R+K
Sbjct:   10 PVPRGLRWLQLVLWNIACIASLLVTFVWASEDYVRQVRQGT-KNFDVQAHGLVAFFMLVDQLLIADTFKLGHMIFTQIYGLVYLAFSVIWFYKGPEDEKYLYEDTLDWGENRLQACLSGGVAVGVLVPIAGLLHLVVFRLREALYGRVRDK 159          
BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: D7G734_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G734_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 2.680e-28
Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 0
Query:   82 GCGSPVPLALRRLQLVVWNITCVVSLVVVALFWFADYNGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVGWEE-KVLYEVLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREML-HSRLREKLVAA---QHIEI 239
            G   PVP  LR LQLV+W+  C+ SL+VV +FW A                     +L+DQFLVADEFKLR+++  Q FGVIY+ FN+ WYY+  ++ +++Y +LDW++  L A IY   +ILV +PLF L+HL + R RE + H+RL     AA   Q IE+
Sbjct:   10 GSPQPVPAVLRHLQLVLWSTACIGSLIVVTIFWGA---------------------LLLDQFLVADEFKLRYILFPQAFGVIYLFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHLGLFRLRESVYHNRLARTSKAAAEAQSIEL 151          
BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: A0A6H5JMZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ5_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 2.420e-24
Identity = 80/228 (35.09%), Postives = 120/228 (52.63%), Query Frame = 0
Query:    3 VFFMSWAIYWREAGASIVLAK--LTHQTWYVAMVYFFVSSASAY--LCWRAIGKGSAGGAEAALEDEEGGGDLASMGGTKTNNGCGSPVPLALRRLQLVVWNITCVVSLVVVALFWFADYNGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVGWE-EKVLYEVLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREMLHS 225
            ++F+ W  +W   G  I  A   +T+  WY+A +YF VS+A+AY  L       G   G  A          +A   G +  N   S    AL   Q+  WN+ CV SLV+V +FW A ++   +TS D+ AH +IAP+M IDQ LVA +F+ + ++ S  F ++Y+ FNIV++    E E+V+Y  +DW      +  + AV   VL PL  L+H  V R RE ++ 
Sbjct:   41 IYFVFWCYFW-PFGEDIDDAHKFVTYWGWYMAAIYFLVSTATAYSFLGSPMASDGPVRGTHA----------VAPHRGNR--NQPLSSNRRALLGFQVFSWNVACVGSLVIVTVFWVALFDNTPLTSTDVNAHILIAPVMAIDQLLVATKFERKQMLASFLFSIVYVAFNIVFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVTFVLVPLGGLIHYCVFRLREYIYE 255          
BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: D7G733_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G733_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 1.370e-23
Identity = 74/242 (30.58%), Postives = 122/242 (50.41%), Query Frame = 0
Query:    1 MAVFFMSWAIYW---REAGASIVLAKLTHQTWYVAMVYFFVSSASAYLCWRAIGKGSAGGAEAALEDEEGGGDLASMGGTKTNNGCGSPVPLALRRLQLVVWNITCVVSLVVVALFWFADYNGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYV-GWEEKVLYEVLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREMLHSRLREKLVAAQHIE 238
            M ++ + WA +W    +    I LA  TH    +A  YF +S  S+ LC   + +      E     EEG              G  SPVP   R LQ + W +TC+ S+VV+++FW   Y      +   ++  ++A +ML+DQFL+A E K ++  +   F V+YI +N+++YY    E++V +EV DWD +P  A ++  + +    P F+ LH+FV R RE +++  +  L   +  E
Sbjct:   54 MTIYCIVWAAWWDRGEDLDIRIYLATWTHM---LATAYFVISLISSLLCMAYLSR------EKPAPVEEG-----KPKRPPPVKGTRSPVPCYFRWLQHISWVLTCISSMVVLSVFWMTIYESDVPVTSVYVSSTILALLMLLDQFLIATEMKFKYAWLGLYFFVVYIFYNVIYYYEHNVEDRVTFEVFDWDERPGRACLWVFLILAFGVPGFTALHVFVYRLRERMYTSYKHNLEVIEEEE 281          
BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: D7G735_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G735_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 2.890e-22
Identity = 55/137 (40.15%), Postives = 84/137 (61.31%), Query Frame = 0
Query:   90 ALRRLQLVVWNITCVVSLVVVALFWFADYNGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVGWE-EKVLYEVLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREMLHS 225
            AL   Q+  WN+ CV SLV+V +FW A ++   +TS D+ AH +IAPIM IDQ LVA +F+ + ++ S +F ++Y+ FNI+++    E E+V+Y  +DW      +  + AV   VL PL  L+H  V R RE ++ 
Sbjct:   30 ALLGFQVFSWNVACVGSLVIVTVFWVALFDNTPLTSTDVNAHILIAPIMAIDQLLVATKFERKQMLASFSFSIVYVAFNIIFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVAFVLVPLGGLIHYCVFRLREYIYE 166          
BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: UPI000A2A6325 (protein rolling stone n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6325)

HSP 1 Score: 56.2 bits (134), Expect = 8.770e-6
Identity = 57/232 (24.57%), Postives = 106/232 (45.69%), Query Frame = 0
Query:    2 AVFFM---SWAIYWREAGAS----IVLAKLTHQTWYVAMVYFFVSSASAYLCWRAIGKGSAGGAEAALEDEEGGGDLASMGGTKTNNGCGSPVPLALRRLQLVVWNITCVVSLVVVALFWFADYNGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVGWEEKVLYEVLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREMLHSR 226
            +VFF+   SW IY   A       +VL  LT+ +++V ++YFFVS+ S    +    +      +    D E G    + G  +             ++ Q + ++++  ++L V   FW   Y+G  +T  D+  H + +  MLID  L +   +L H+I    F  +Y++  ++ Y+    ++ +Y+  D++N PL A+    + ILV  P+    +    R R    S+
Sbjct:   39 SVFFLYSISWIIYRLIAHDRFRQVVVLFYLTNWSYFVLIIYFFVSAVSTIFEYTKQRQ-----RQVHTADAERGHAHTTEGNARW-----------FQQAQWLFYSVSATMALGVTFFFWLFVYDGTGVTLSDVNVHILNSVFMLIDHSLSSMPVRLFHMIYPMAFTXLYMIATML-YWAFISKEYIYKATDYNNNPLQAIGIFLLGILVAGPVIHTFYYATYRLRRYAASK 253          
BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: A0A0N1IPM0_PAPMA (Protein rolling stone n=9 Tax=Papilio TaxID=7145 RepID=A0A0N1IPM0_PAPMA)

HSP 1 Score: 55.5 bits (132), Expect = 1.590e-5
Identity = 42/150 (28.00%), Postives = 77/150 (51.33%), Query Frame = 0
Query:   93 RLQLVVWNITCVVSLVVVALFWFA----------DYNGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVG----WEEKVLYEVLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREMLHSRLR 228
            ++  V++NIT  V+ ++   +W              N     ++D++ H V + +ML +  L A   +LRHV+    FG++Y++F IV+Y  G    W    +Y V+DW +KP   ++  +++ L L+ L  +L + V   R+M+  R R
Sbjct:  107 KVYWVLYNITIPVAFLITVFYWSILNTVLRTFKKKVNYAPNPTLDVMLHGVNSLVMLTELILSAHPSRLRHVMQPLYFGIVYLIFTIVYYDAGGLDPWGHVFIYPVIDW-SKPEQTLVVASLTGLFLA-LMHILTVGVATLRDMIARRCR 254          
BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Match: UPI0016037AC5 (protein rolling stone-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016037AC5)

HSP 1 Score: 54.3 bits (129), Expect = 3.290e-5
Identity = 40/151 (26.49%), Postives = 75/151 (49.67%), Query Frame = 0
Query:   93 RLQLVVWNITCVVSLVVVALFWFADYNGGAITSVDILAHAVIAPIMLIDQFLVADEFKLRHVIISQTFGVIYILFNIVWYYVGWE----EKVLYEVLDWDNKPLVAVIYGAVSILVLSPLFSLLHLFVCRRREMLHSRLREKLVAAQHIEI 239
            +L  V++N+     + +  LFW     GG  +++ IL HA+ +  ++ID  +     +L H +   TFGV+YILF ++++  G      +  +Y  LD+   P +A I   + +LV  PL   +   +   RE L   L+ +    Q++++
Sbjct:   89 KLYWVLYNVAFGGGICITILFW--ALIGGDSSALSILIHAMNSVTIVIDVMVSGLPCRLLHFVYPLTFGVVYILFTVIYWAAGGTGPDGQPYIYPFLDYGGGPALAAIVAVLGVLVAIPLCHCIVFALVVARESLVRSLKRRQSDNQNVDV 237          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1945.5775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5JSI9_9PHAE4.840e-5745.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVA0_9PHAE1.370e-3046.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX10_ECTSI2.680e-3046.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G734_ECTSI2.680e-2843.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMZ5_9PHAE2.420e-2435.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G733_ECTSI1.370e-2330.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G735_ECTSI2.890e-2240.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI000A2A63258.770e-624.57protein rolling stone n=1 Tax=Exaiptasia diaphana ... [more]
A0A0N1IPM0_PAPMA1.590e-528.00Protein rolling stone n=9 Tax=Papilio TaxID=7145 R... [more]
UPI0016037AC53.290e-526.49protein rolling stone-like n=1 Tax=Branchiostoma f... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039860Protein rolling stonePANTHERPTHR12242:SF1LD06593P-RELATEDcoord: 2..230
NoneNo IPR availablePANTHERPTHR12242UNCHARACTERIZEDcoord: 2..230
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..116
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..152
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..127
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 128..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..174
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 217..240
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 194..216
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 175..193
NoneNo IPR availableTMHMMTMhelixcoord: 29..51
NoneNo IPR availableTMHMMTMhelixcoord: 153..175
NoneNo IPR availableTMHMMTMhelixcoord: 128..146
NoneNo IPR availableTMHMMTMhelixcoord: 96..118
NoneNo IPR availableTMHMMTMhelixcoord: 195..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1945contigL-elsbetiae_contig1945:2708..6096 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1945.5775.1mRNA_L-elsbetiae_contig1945.5775.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1945 2275..6202 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1945.5775.1 ID=prot_L-elsbetiae_contig1945.5775.1|Name=mRNA_L-elsbetiae_contig1945.5775.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=241bp
MAVFFMSWAIYWREAGASIVLAKLTHQTWYVAMVYFFVSSASAYLCWRAI
GKGSAGGAEAALEDEEGGGDLASMGGTKTNNGCGSPVPLALRRLQLVVWN
ITCVVSLVVVALFWFADYNGGAITSVDILAHAVIAPIMLIDQFLVADEFK
LRHVIISQTFGVIYILFNIVWYYVGWEEKVLYEVLDWDNKPLVAVIYGAV
SILVLSPLFSLLHLFVCRRREMLHSRLREKLVAAQHIEIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039860Rost