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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal anchor |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-00_007430.1 |
| Exons | 1 |
| Model size | 2836 |
| Cds size | 1704 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815801.5564048-UTR-L-elsbetiae_contig1931:3433..3648 | 1622815801.5564048-UTR-L-elsbetiae_contig1931:3433..3648 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1931 3434..3648 + |
| 1691683111.7093923-UTR-L-elsbetiae_contig1931:3433..3648 | 1691683111.7093923-UTR-L-elsbetiae_contig1931:3433..3648 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1931 3434..3648 + |
| 1622815801.5782764-UTR-L-elsbetiae_contig1931:5352..6269 | 1622815801.5782764-UTR-L-elsbetiae_contig1931:5352..6269 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1931 5353..6269 + |
| 1691683111.7279482-UTR-L-elsbetiae_contig1931:5352..6269 | 1691683111.7279482-UTR-L-elsbetiae_contig1931:5352..6269 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1931 5353..6269 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815801.5686014-CDS-L-elsbetiae_contig1931:3648..5352 | 1622815801.5686014-CDS-L-elsbetiae_contig1931:3648..5352 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1931 3649..5352 + |
| 1691683111.718021-CDS-L-elsbetiae_contig1931:3648..5352 | 1691683111.718021-CDS-L-elsbetiae_contig1931:3648..5352 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1931 3649..5352 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1931.5717.1 >prot_L-elsbetiae_contig1931.5717.1 ID=prot_L-elsbetiae_contig1931.5717.1|Name=mRNA_L-elsbetiae_contig1931.5717.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=568bp
MSFGLETSWHVEVVNTIVTAVATALVLFLTPGLQKWLSRRYWNTVSRGKT
KDLLVSGGFDGFGEFIWKVHRTSAEGTERGRVIRDLLPYAVVIAGMQLLP
FSTSGVGASASQKDGSPVKVVGSVANPAGEVIETLNLAKLEALQKGDING
EATPFLLGSPELFNFGTSVVGLEWGVSFPGTDGDSSTEDGDPDLTIFGDG
FLVEQDGKGFGTYPVSTCLTVTETGGVFSANTCSDVRVELEAVEFVVESV
QSLYWTSESCEASKHAVFNQEVTYRLRTLTLVDDDSEFTDVAMVEGTEVE
ALCGEIFESAIEACIFEVGDHFYVGDWNIGQFADGSCEPDDGTNEAYIPV
KHKMAVLEIDASRGVFPSREEYEVSVAMLAEIVAGSGTIFSRQQLALVLG
AFSRLSGMKLGIGIAHHPETVVVVTVSRVVLILWALLLAAGCVIHIRERR
QDCKIFIPSTAWDWYAVGARESLGDGDASGSTPPSDHHYLAKYGCEKSFV
EESDGIVQRLSWISPERPEAEVMGAGGALPIPPTSRRPDLSAIGEAVEAS
THVPRSINVPLRRSVYS* back to topmRNA from alignment at L-elsbetiae_contig1931:3434..6269+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1931.5717.1 ID=mRNA_L-elsbetiae_contig1931.5717.1|Name=mRNA_L-elsbetiae_contig1931.5717.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2836bp|location=Sequence derived from alignment at L-elsbetiae_contig1931:3434..6269+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGCCTGGTACATATCCTTCGTGGTCGTGATCGGCACTTGCGCTAGATC
ACGTCGCTCACTCCAGGGCTTGGCAACAAGGCTGCATACCGGCGGCGGTA
CGTCCCTCGAGTGCTAGACCGTGCTGCCTCTTATTTAGGAACAGCGCCTA
GTCCATTGTCAACCAGTCCCGAAGGAGCGGAGGCTAGATTATTGGACCTC
AAGCCTGCCGGCAGAATGTCGTTCGGCTTGGAGACCAGTTGGCATGTCGA
GGTTGTCAACACTATCGTGACCGCAGTCGCGACGGCGTTGGTCCTGTTCT
TAACGCCGGGTCTCCAGAAGTGGCTGTCCCGGAGGTATTGGAATACTGTG
TCGCGTGGCAAGACCAAGGACCTCCTGGTTTCAGGAGGCTTCGATGGCTT
TGGCGAATTCATTTGGAAGGTACACCGGACTTCAGCTGAAGGCACCGAGA
GGGGGCGAGTAATCCGGGATCTGCTGCCGTACGCGGTAGTCATAGCCGGG
ATGCAGCTTCTGCCGTTCTCCACATCGGGTGTCGGGGCCAGCGCGAGCCA
AAAGGACGGCAGTCCCGTCAAAGTGGTGGGCTCCGTAGCGAACCCTGCAG
GCGAAGTAATAGAGACGTTAAACCTTGCCAAGCTAGAGGCCCTGCAGAAG
GGGGACATTAACGGGGAGGCAACGCCGTTTCTGCTGGGGAGCCCGGAATT
ATTCAACTTCGGGACAAGTGTGGTAGGCTTGGAGTGGGGCGTGTCCTTTC
CCGGTACGGACGGCGACAGTTCGACGGAAGACGGGGACCCAGACTTGACA
ATCTTTGGCGATGGATTCCTGGTGGAACAGGACGGCAAGGGCTTTGGCAC
CTACCCTGTGAGCACTTGCCTCACGGTGACAGAAACTGGCGGCGTGTTCT
CTGCGAACACCTGCTCTGACGTGCGTGTTGAGCTTGAAGCGGTAGAGTTC
GTGGTCGAGTCGGTTCAATCATTGTATTGGACATCGGAGTCTTGCGAAGC
CTCCAAACACGCCGTGTTCAATCAAGAGGTCACGTACAGGTTGCGGACGT
TGACCTTAGTCGACGACGACAGCGAGTTCACCGACGTCGCAATGGTCGAG
GGCACCGAGGTCGAGGCATTATGTGGGGAAATCTTCGAATCAGCCATCGA
AGCATGCATCTTCGAGGTCGGAGACCACTTTTACGTCGGTGACTGGAACA
TTGGGCAATTCGCCGATGGGTCGTGCGAACCCGACGATGGAACCAACGAA
GCTTACATCCCTGTAAAACACAAAATGGCGGTTCTCGAGATAGACGCGAG
CCGTGGGGTGTTCCCATCTCGAGAGGAGTACGAAGTATCCGTTGCAATGC
TCGCTGAAATTGTGGCCGGGTCAGGCACAATCTTCTCTCGCCAGCAACTG
GCCTTGGTGCTAGGCGCGTTTTCCCGCCTATCGGGTATGAAATTAGGGAT
TGGCATAGCCCACCACCCAGAGACCGTTGTAGTCGTTACGGTCTCGCGAG
TGGTGCTTATCCTCTGGGCGCTGCTGCTTGCCGCGGGGTGCGTGATACAT
ATTCGAGAGCGCAGACAAGACTGCAAGATTTTCATACCATCGACAGCCTG
GGATTGGTATGCGGTCGGGGCCCGCGAATCTCTAGGCGATGGGGATGCAT
CTGGTTCCACGCCACCATCAGACCACCACTACCTCGCCAAGTACGGGTGC
GAAAAGTCTTTCGTGGAGGAGAGCGATGGCATCGTACAGCGCCTGAGCTG
GATCAGTCCAGAGAGACCGGAGGCAGAGGTGATGGGCGCCGGCGGCGCCC
TTCCCATCCCTCCAACATCACGCCGTCCGGATCTGAGTGCAATAGGCGAA
GCCGTCGAGGCGAGTACACACGTCCCCCGTTCCATCAACGTACCATTACG
GCGCTCTGTGTACTCTTGAATGTCTAAAGGGGGCAACGATGGTATGTACC
TCCCGCGAGATGGGATGTGTGCGAGCACGCCAAGGTTTCCGAGGATCGTT
GGGCGATTGGTGTGACCTATGATAGGTATTTTCAAATCGGCTTCAATGCG
CCTGAATGCAACTGGTGCAAGTGCGGGCGCAGAAAGTTATGTAGGTACAT
AGCTTCTCCACGAGGCCTTACAGGGCCGGCCATGGGAGGTAACGTCAGAC
GTGTTTATTCAATTCTTGTTTTGACAGCCAGTGGGCAATATCTAGTGCTT
GCGGTGGTTGGGGAAGTTGTCCCAATGGACCGAGGTTTGTCACTTACTTT
TAACTTACAATATCGAAAGCCGGTTTCAACAATAAAGCAACAAACCCTTC
TAAAACCAAGGTTTTTGACAAACACACGTTGGCCTTCCTAAATCGGGCAT
CCACGCCGACAGCGGAAATATCGTCGGATGCGATCATACGTGTCATTTCC
CCCAACATTTAGGGTTGGACGATTGCGGTTTCGTGTCCGTTGGGTACCTT
TAATGTACTTCGATGTGCCAGAAATGCTGCTCGAATATGAGCATGAATGT
GTTGAGTTGGTCATCTGAGGACTTTGGTGGTGCCGTTTTCTAGATGTTTC
ATCCAGCTCAAAAGACGATGAGGGTGCTTCGTATCGATATTGTGATTTAG
GGCTCAAGGACATTGTGGGCGTCTTCTGGTTTAATTTGGAACCAAACGGC
GATTTGATTGTGATTGATTTTGCCGTTGGTGTGGAAATCTGAAATTTGGG
GGTCGGTACCGAAAAGATGGTGTGCCCTAAAGCGGCTTGCTCGACTTATA
TTTGTAAGTGTAGGTTTCCCCGAGAGTTGGCCCCGAAACTTTTAGAGATT
TTGTCTTGCTTCTTTTAAACGTATGTATCACAACGG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1931:3434..6269+ >mRNA_L-elsbetiae_contig1931.5717.1 ID=mRNA_L-elsbetiae_contig1931.5717.1|Name=mRNA_L-elsbetiae_contig1931.5717.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3408bp|location=Sequence derived from alignment at L-elsbetiae_contig1931:3434..6269+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGTTCGGCTTGGAGACCAGTTGGCATGTCGAGGTTGTCAACACTAT
CGTGACCGCAGTCGCGACGGCGTTGGTCCTGTTCTTAACGCCGGGTCTCC
AGAAGTGGCTGTCCCGGAGGTATTGGAATACTGTGTCGCGTGGCAAGACC
AAGGACCTCCTGGTTTCAGGAGGCTTCGATGGCTTTGGCGAATTCATTTG
GAAGGTACACCGGACTTCAGCTGAAGGCACCGAGAGGGGGCGAGTAATCC
GGGATCTGCTGCCGTACGCGGTAGTCATAGCCGGGATGCAGCTTCTGCCG
TTCTCCACATCGGGTGTCGGGGCCAGCGCGAGCCAAAAGGACGGCAGTCC
CGTCAAAGTGGTGGGCTCCGTAGCGAACCCTGCAGGCGAAGTAATAGAGA
CGTTAAACCTTGCCAAGCTAGAGGCCCTGCAGAAGGGGGACATTAACGGG
GAGGCAACGCCGTTTCTGCTGGGGAGCCCGGAATTATTCAACTTCGGGAC
AAGTGTGGTAGGCTTGGAGTGGGGCGTGTCCTTTCCCGGTACGGACGGCG
ACAGTTCGACGGAAGACGGGGACCCAGACTTGACAATCTTTGGCGATGGA
TTCCTGGTGGAACAGGACGGCAAGGGCTTTGGCACCTACCCTGTGAGCAC
TTGCCTCACGGTGACAGAAACTGGCGGCGTGTTCTCTGCGAACACCTGCT
CTGACGTGCGTGTTGAGCTTGAAGCGGTAGAGTTCGTGGTCGAGTCGGTT
CAATCATTGTATTGGACATCGGAGTCTTGCGAAGCCTCCAAACACGCCGT
GTTCAATCAAGAGGTCACGTACAGGTTGCGGACGTTGACCTTAGTCGACG
ACGACAGCGAGTTCACCGACGTCGCAATGGTCGAGGGCACCGAGGTCGAG
GCATTATGTGGGGAAATCTTCGAATCAGCCATCGAAGCATGCATCTTCGA
GGTCGGAGACCACTTTTACGTCGGTGACTGGAACATTGGGCAATTCGCCG
ATGGGTCGTGCGAACCCGACGATGGAACCAACGAAGCTTACATCCCTGTA
AAACACAAAATGGCGGTTCTCGAGATAGACGCGAGCCGTGGGGTGTTCCC
ATCTCGAGAGGAGTACGAAGTATCCGTTGCAATGCTCGCTGAAATTGTGG
CCGGGTCAGGCACAATCTTCTCTCGCCAGCAACTGGCCTTGGTGCTAGGC
GCGTTTTCCCGCCTATCGGGTATGAAATTAGGGATTGGCATAGCCCACCA
CCCAGAGACCGTTGTAGTCGTTACGGTCTCGCGAGTGGTGCTTATCCTCT
GGGCGCTGCTGCTTGCCGCGGGGTGCGTGATACATATTCGAGAGCGCAGA
CAAGACTGCAAGATTTTCATACCATCGACAGCCTGGGATTGGTATGCGGT
CGGGGCCCGCGAATCTCTAGGCGATGGGGATGCATCTGGTTCCACGCCAC
CATCAGACCACCACTACCTCGCCAAGTACGGGTGCGAAAAGTCTTTCGTG
GAGGAGAGCGATGGCATCGTACAGCGCCTGAGCTGGATCAGTCCAGAGAG
ACCGGAGGCAGAGGTGATGGGCGCCGGCGGCGCCCTTCCCATCCCTCCAA
CATCACGCCGTCCGGATCTGAGTGCAATAGGCGAAGCCGTCGAGGCGAGT
ACACACGTCCCCCGTTCCATCAACGTACCATTACGGCGCTCTGTGTACTC
TTGAATGTCGTTCGGCTTGGAGACCAGTTGGCATGTCGAGGTTGTCAACA
CTATCGTGACCGCAGTCGCGACGGCGTTGGTCCTGTTCTTAACGCCGGGT
CTCCAGAAGTGGCTGTCCCGGAGGTATTGGAATACTGTGTCGCGTGGCAA
GACCAAGGACCTCCTGGTTTCAGGAGGCTTCGATGGCTTTGGCGAATTCA
TTTGGAAGGTACACCGGACTTCAGCTGAAGGCACCGAGAGGGGGCGAGTA
ATCCGGGATCTGCTGCCGTACGCGGTAGTCATAGCCGGGATGCAGCTTCT
GCCGTTCTCCACATCGGGTGTCGGGGCCAGCGCGAGCCAAAAGGACGGCA
GTCCCGTCAAAGTGGTGGGCTCCGTAGCGAACCCTGCAGGCGAAGTAATA
GAGACGTTAAACCTTGCCAAGCTAGAGGCCCTGCAGAAGGGGGACATTAA
CGGGGAGGCAACGCCGTTTCTGCTGGGGAGCCCGGAATTATTCAACTTCG
GGACAAGTGTGGTAGGCTTGGAGTGGGGCGTGTCCTTTCCCGGTACGGAC
GGCGACAGTTCGACGGAAGACGGGGACCCAGACTTGACAATCTTTGGCGA
TGGATTCCTGGTGGAACAGGACGGCAAGGGCTTTGGCACCTACCCTGTGA
GCACTTGCCTCACGGTGACAGAAACTGGCGGCGTGTTCTCTGCGAACACC
TGCTCTGACGTGCGTGTTGAGCTTGAAGCGGTAGAGTTCGTGGTCGAGTC
GGTTCAATCATTGTATTGGACATCGGAGTCTTGCGAAGCCTCCAAACACG
CCGTGTTCAATCAAGAGGTCACGTACAGGTTGCGGACGTTGACCTTAGTC
GACGACGACAGCGAGTTCACCGACGTCGCAATGGTCGAGGGCACCGAGGT
CGAGGCATTATGTGGGGAAATCTTCGAATCAGCCATCGAAGCATGCATCT
TCGAGGTCGGAGACCACTTTTACGTCGGTGACTGGAACATTGGGCAATTC
GCCGATGGGTCGTGCGAACCCGACGATGGAACCAACGAAGCTTACATCCC
TGTAAAACACAAAATGGCGGTTCTCGAGATAGACGCGAGCCGTGGGGTGT
TCCCATCTCGAGAGGAGTACGAAGTATCCGTTGCAATGCTCGCTGAAATT
GTGGCCGGGTCAGGCACAATCTTCTCTCGCCAGCAACTGGCCTTGGTGCT
AGGCGCGTTTTCCCGCCTATCGGGTATGAAATTAGGGATTGGCATAGCCC
ACCACCCAGAGACCGTTGTAGTCGTTACGGTCTCGCGAGTGGTGCTTATC
CTCTGGGCGCTGCTGCTTGCCGCGGGGTGCGTGATACATATTCGAGAGCG
CAGACAAGACTGCAAGATTTTCATACCATCGACAGCCTGGGATTGGTATG
CGGTCGGGGCCCGCGAATCTCTAGGCGATGGGGATGCATCTGGTTCCACG
CCACCATCAGACCACCACTACCTCGCCAAGTACGGGTGCGAAAAGTCTTT
CGTGGAGGAGAGCGATGGCATCGTACAGCGCCTGAGCTGGATCAGTCCAG
AGAGACCGGAGGCAGAGGTGATGGGCGCCGGCGGCGCCCTTCCCATCCCT
CCAACATCACGCCGTCCGGATCTGAGTGCAATAGGCGAAGCCGTCGAGGC
GAGTACACACGTCCCCCGTTCCATCAACGTACCATTACGGCGCTCTGTGT
ACTCTTGA back to top
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