prot_L-elsbetiae_contig1931.5717.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1931.5717.1
Unique Nameprot_L-elsbetiae_contig1931.5717.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length568
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1931.5717.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..394
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..12
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 421..446
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 395..415
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 13..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 416..420
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 447..567
NoneNo IPR availableTMHMMTMhelixcoord: 424..446
NoneNo IPR availableTMHMMTMhelixcoord: 13..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1931contigL-elsbetiae_contig1931:3649..5352 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1931.5717.1mRNA_L-elsbetiae_contig1931.5717.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1931 3434..6269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1931.5717.1 ID=prot_L-elsbetiae_contig1931.5717.1|Name=mRNA_L-elsbetiae_contig1931.5717.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=568bp
MSFGLETSWHVEVVNTIVTAVATALVLFLTPGLQKWLSRRYWNTVSRGKT
KDLLVSGGFDGFGEFIWKVHRTSAEGTERGRVIRDLLPYAVVIAGMQLLP
FSTSGVGASASQKDGSPVKVVGSVANPAGEVIETLNLAKLEALQKGDING
EATPFLLGSPELFNFGTSVVGLEWGVSFPGTDGDSSTEDGDPDLTIFGDG
FLVEQDGKGFGTYPVSTCLTVTETGGVFSANTCSDVRVELEAVEFVVESV
QSLYWTSESCEASKHAVFNQEVTYRLRTLTLVDDDSEFTDVAMVEGTEVE
ALCGEIFESAIEACIFEVGDHFYVGDWNIGQFADGSCEPDDGTNEAYIPV
KHKMAVLEIDASRGVFPSREEYEVSVAMLAEIVAGSGTIFSRQQLALVLG
AFSRLSGMKLGIGIAHHPETVVVVTVSRVVLILWALLLAAGCVIHIRERR
QDCKIFIPSTAWDWYAVGARESLGDGDASGSTPPSDHHYLAKYGCEKSFV
EESDGIVQRLSWISPERPEAEVMGAGGALPIPPTSRRPDLSAIGEAVEAS
THVPRSINVPLRRSVYS*
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