mRNA_L-elsbetiae_contig1926.5701.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1926.5701.1 vs. uniprot
Match: D7G0W6_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W6_ECTSI) HSP 1 Score: 233 bits (595), Expect = 1.440e-77 Identity = 117/123 (95.12%), Postives = 122/123 (99.19%), Query Frame = 1 Query: 1 MRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKGAVDHLSGFNVCGRYLIVLYYQPAKMAKRMDQQAKKKELEDLRAKLKVAKEEDAAGDTPATQ 369 MRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVY+DIYDAK AVDHLSGFNVCGRYLIVLYYQPAKMAKRMDQQAKKKELE+LRAKLKVA+EEDAAGDTPA++ Sbjct: 1 MRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYDDIYDAKAAVDHLSGFNVCGRYLIVLYYQPAKMAKRMDQQAKKKELEELRAKLKVAREEDAAGDTPASK 123
BLAST of mRNA_L-elsbetiae_contig1926.5701.1 vs. uniprot
Match: A0A6S9GFW4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GFW4_HETAK) HSP 1 Score: 184 bits (468), Expect = 3.540e-58 Identity = 87/113 (76.99%), Postives = 103/113 (91.15%), Query Frame = 1 Query: 4 RLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKGAVDHLSGFNVCGRYLIVLYYQPAKMAKRMDQQAKKKELEDLRAKLKVAKEED 342 RLPPEVNR +YVRNLPFKI+A+EMYDIFGKYGAIRQIR+GD+ DT+GTAFVVYEDIYDAK AVDHLSGFNVCGRYLIVLYYQP +MAK+MDQ+ +++ELE+L+AK ++ D Sbjct: 12 RLPPEVNRVLYVRNLPFKITAEEMYDIFGKYGAIRQIRIGDKPDTKGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLIVLYYQPTRMAKKMDQERERRELEELKAKYLAERQND 124
BLAST of mRNA_L-elsbetiae_contig1926.5701.1 vs. uniprot
Match: A0A7S2C985_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C985_9STRA) HSP 1 Score: 182 bits (461), Expect = 4.390e-57 Identity = 87/112 (77.68%), Postives = 101/112 (90.18%), Query Frame = 1 Query: 4 RLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKGAVDHLSGFNVCGRYLIVLYYQPAKMAKRMDQQAKKKELEDLRAKLKVAKEE 339 RLPPEVNR +Y+RNLPFKI+++EMYDIFGKYGAIRQIR+GD+ DTRGTAFVVYEDIYDAK AVDHLSGFNVCGRYLIVLYYQ A+M KR+D K++ELE+L+AK V+ EE Sbjct: 12 RLPPEVNRVLYIRNLPFKITSEEMYDIFGKYGAIRQIRVGDKPDTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLIVLYYQAARMEKRIDNDKKRRELEELKAKFNVSGEE 123
BLAST of mRNA_L-elsbetiae_contig1926.5701.1 vs. uniprot
Match: A0A7S2DAY0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DAY0_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.850e-56 Identity = 86/112 (76.79%), Postives = 100/112 (89.29%), Query Frame = 1 Query: 4 RLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKGAVDHLSGFNVCGRYLIVLYYQPAKMAKRMDQQAKKKELEDLRAKLKVAKEE 339 RLPPEVNR +YVRNLPFKI+++EMYDIFGKYGAIRQIR+GD+ DTRGTAFVVYEDIYDAK AVDHLSGFNVCGRYL+VLYYQ ++M KRMD K+KELE+L+ K V+ +E Sbjct: 14 RLPPEVNRVLYVRNLPFKITSEEMYDIFGKYGAIRQIRVGDKPDTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLVVLYYQASRMQKRMDNDKKRKELEELKQKYNVSADE 125
BLAST of mRNA_L-elsbetiae_contig1926.5701.1 vs. uniprot
Match: A0A835YN30_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN30_9STRA) HSP 1 Score: 179 bits (455), Expect = 3.380e-56 Identity = 87/111 (78.38%), Postives = 98/111 (88.29%), Query Frame = 1 Query: 4 RLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKGAVDHLSGFNVCGRYLIVLYYQPAKMAKRMDQQAKKKELEDLRAKLKVAKE 336 RLPPEVNR +YVRNLPFKI+ADEMYDIFGKYGAIRQIRLGD+ DTRGTAFVVYEDIYDAK AVDHLSGFNVCGRYLIVLYYQ K KR+D+ K++E+E+++AK V E Sbjct: 11 RLPPEVNRILYVRNLPFKITADEMYDIFGKYGAIRQIRLGDKPDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQSTKALKRVDEMKKRREIEEIKAKFGVGGE 121
BLAST of mRNA_L-elsbetiae_contig1926.5701.1 vs. uniprot
Match: R1DMS8_EMIHU (RRM domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DMS8_EMIHU) HSP 1 Score: 179 bits (454), Expect = 5.640e-56 Identity = 86/109 (78.90%), Postives = 99/109 (90.83%), Query Frame = 1 Query: 1 MRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKGAVDHLSGFNVCGRYLIVLYYQPAKMAKRMDQQAKKKELEDLRAKLKV 327 MRLPPEVNRA+YVRNLPFKI+A+EMYDIFGK+GAIRQIRLG+ DTRGTAFVVYEDIYDAK AVDHLSGFNVCGRYL+VLYYQ KM KR+D + ++KEL ++RAKL + Sbjct: 10 MRLPPEVNRALYVRNLPFKITAEEMYDIFGKFGAIRQIRLGNASDTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLVVLYYQQTKMQKRLDTEREQKELAEMRAKLGI 118
BLAST of mRNA_L-elsbetiae_contig1926.5701.1 vs. uniprot
Match: A0A7S2S8J7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8J7_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.610e-55 Identity = 84/111 (75.68%), Postives = 99/111 (89.19%), Query Frame = 1 Query: 4 RLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKGAVDHLSGFNVCGRYLIVLYYQPAKMAKRMDQQAKKKELEDLRAKLKVAKE 336 RLPPEVNR VYVRNLPFKISA+E+YDIFGKYGA+RQ+RLGD+ DTRGTAFVVYEDIYDAK AVDHL+GFNVCGRYL+VLYYQ +KM +R+D Q K++ELE+L+ K + E Sbjct: 16 RLPPEVNRVVYVRNLPFKISAEEIYDIFGKYGALRQVRLGDKPDTRGTAFVVYEDIYDAKNAVDHLNGFNVCGRYLVVLYYQASKMQERIDNQRKRQELEELKKKYNIQTE 126
BLAST of mRNA_L-elsbetiae_contig1926.5701.1 vs. uniprot
Match: A0A7S3SDL9_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SDL9_9SPIT) HSP 1 Score: 176 bits (445), Expect = 1.320e-54 Identity = 83/107 (77.57%), Postives = 97/107 (90.65%), Query Frame = 1 Query: 1 MRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKGAVDHLSGFNVCGRYLIVLYYQPAKMAKRMDQQAKKKELEDLRAKL 321 +RLPPEVNRA+YVRNLPFKISA+EMYDIFGK+GA+RQ+RLG DTRGTAFVVYEDIYDAK AVDHLSGFNVCGRYL+VLYYQ KM KR+D + +++EL ++RAKL Sbjct: 16 LRLPPEVNRALYVRNLPFKISAEEMYDIFGKFGALRQVRLGSAPDTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLVVLYYQQTKMQKRLDTEREQRELAEMRAKL 122
BLAST of mRNA_L-elsbetiae_contig1926.5701.1 vs. uniprot
Match: A0A7S3HNH0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNH0_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.420e-54 Identity = 84/110 (76.36%), Postives = 96/110 (87.27%), Query Frame = 1 Query: 10 PPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKGAVDHLSGFNVCGRYLIVLYYQPAKMAKRMDQQAKKKELEDLRAKLKVAKEE 339 PPEVNR +YVRNLPFKI+A+EMYDIFGKYGAIRQIRLGD+QDTRGTAFVVYEDIYDAK AVDHLSGFNVC RYLIVLYYQ KM K D +K+KE++D++AK + +E Sbjct: 1 PPEVNRVLYVRNLPFKITAEEMYDIFGKYGAIRQIRLGDKQDTRGTAFVVYEDIYDAKNAVDHLSGFNVCNRYLIVLYYQQTKMQKVFDNNSKRKEVDDMKAKFGIKTDE 110
BLAST of mRNA_L-elsbetiae_contig1926.5701.1 vs. uniprot
Match: A0A067D1A1_SAPPC (Pre-mRNA branch site p14-like protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D1A1_SAPPC) HSP 1 Score: 174 bits (441), Expect = 4.040e-54 Identity = 85/108 (78.70%), Postives = 97/108 (89.81%), Query Frame = 1 Query: 4 RLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYEDIYDAKGAVDHLSGFNVCGRYLIVLYYQPAKMAKRMDQQAKKKELEDLRAKLKV 327 RLPPEVNR +YVRNLPFKIS+DEMYDIFGKYGAIRQIRLG DTRGTAFVVYEDIYDAK AVDHLSGFNVCGRYL+VLYYQ +++K+MD QAK++EL +L+A+ V Sbjct: 14 RLPPEVNRVLYVRNLPFKISSDEMYDIFGKYGAIRQIRLGVNADTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLVVLYYQANRVSKKMDVQAKQQELAELKARYGV 121 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1926.5701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1926.5701.1 >prot_L-elsbetiae_contig1926.5701.1 ID=prot_L-elsbetiae_contig1926.5701.1|Name=mRNA_L-elsbetiae_contig1926.5701.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=124bp MRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAback to top mRNA from alignment at L-elsbetiae_contig1926:6922..12014- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1926.5701.1 ID=mRNA_L-elsbetiae_contig1926.5701.1|Name=mRNA_L-elsbetiae_contig1926.5701.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5093bp|location=Sequence derived from alignment at L-elsbetiae_contig1926:6922..12014- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1926:6922..12014- >mRNA_L-elsbetiae_contig1926.5701.1 ID=mRNA_L-elsbetiae_contig1926.5701.1|Name=mRNA_L-elsbetiae_contig1926.5701.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=744bp|location=Sequence derived from alignment at L-elsbetiae_contig1926:6922..12014- (Laminarionema elsbetiae ELsaHSoW15)back to top |