Homology
BLAST of mRNA_L-elsbetiae_contig1924.5691.1 vs. uniprot
Match:
D7G736_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G736_ECTSI)
HSP 1 Score: 259 bits (661), Expect = 1.890e-77
Identity = 152/324 (46.91%), Postives = 197/324 (60.80%), Query Frame = 1
Query: 46 MGCWSLT-PDAALLAQTSRFLQAPTFACYKGLCFFYFLAWCVVWPLYYEHMYLFLTWWAWYIGAVYFALSFITACMHLR-WRRAALLMA-QSLSGGGERAREG---------ARTPLAPRMHVPRLERVLLVSQLFAWNLSCLGSLIVCVIFWATLYDGSAVSSVDVNAHSFFALIMVVDQFLVASEFRLRDAWKSEAVGSMYLVFNITYYCLAPPGEKLIYYILDWERAPLAAVGYSALTLFVLIPVFAAFHCGIYRLRESTFATCRKRADIASDVLHDHLLGAADGGSGGXXXXXXXXXSTPRDSVSSREEEAEAGTNVVGV 981
MGC S+T PD AL A TSRFL+ F +KGL YFL WC +WPL Y MYLF T+W WY G YFALSF TAC H R W A A + S GG R G TP A R + LE+ +L QLF WN++CLGSL V +I+W++LY G+ ++SVD+NAH+ A +MV DQ LVA+ FR+RD WK+E YLV+++ +Y L ++LIY ILDW+R A YS +FVLIP + H I+RLRES +ATCR+RA+ +S VL+D LL A DGGS ST +SV+S + GT++ +
Sbjct: 1 MGCCSVTAPDLALRAATSRFLKPGPFVAFKGLFVAYFLIWCFLWPLDYTSMYLFATYWVWYTGTAYFALSFATACAHFRRWSAATQARAPDNGSAGGGSDRPGPSWSNLTGDVSTP-ALRTRIHPLEQAVLAIQLFTWNVACLGSLFVAIIYWSSLYTGTPITSVDMNAHTLIAFVMVADQMLVATPFRIRDMWKAEVFAITYLVYSLLWYFLE---QELIYVILDWDRHFWEAFSYSVAGIFVLIPATSVLHYYIFRLRESIYATCRQRAEASSGVLNDRLLSAEDGGS-----------STQSESVTSHVPQT--GTDLAAI 307
BLAST of mRNA_L-elsbetiae_contig1924.5691.1 vs. uniprot
Match:
A0A6H5JMZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ5_9PHAE)
HSP 1 Score: 154 bits (389), Expect = 1.110e-38
Identity = 87/254 (34.25%), Postives = 136/254 (53.54%), Query Frame = 1
Query: 61 LTPDAALLAQTSRFLQAPTFACYKGLCFFYFLAWCVVWPLY--YEHMYLFLTWWAWYIGAVYFALSFITACMHLRWRRAALLMAQSLSGGGERAREGARTPLAPRMHVPRLE--RVLLVSQLFAWNLSCLGSLIVCVIFWATLYDGSAVSSVDVNAHSFFALIMVVDQFLVASEFRLRDAWKSEAVGSMYLVFNITYYCLAPPGEKLIYYILDWERAPLAAVGYSALTLFVLIPVFAAFHCGIYRLRESTFATC 810
L P+ + A TSRFL +F CYK + YF+ WC WP + + F+T+W WY+ A+YF +S TA L ++ G A P + P R LL Q+F+WN++C+GSL++ +FW L+D + ++S DVNAH A +M +DQ LVA++F + S +Y+ FNI ++ AP E++IY +DW + + ++A+ FVL+P+ H ++RLRE + TC
Sbjct: 13 LEPNDPVRAVTSRFLSQRSFLCYKVIATIYFVFWCYFWPFGEDIDDAHKFVTYWGWYMAAIYFLVSTATAYSFL---------GSPMASDGPVRGTHAVAPHRGNRNQPLSSNRRALLGFQVFSWNVACVGSLVIVTVFWVALFDNTPLTSTDVNAHILIAPVMAIDQLLVATKFERKQMLASFLFSIVYVAFNIVFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVTFVLVPLGGLIHYCVFRLREYIYETC 257
BLAST of mRNA_L-elsbetiae_contig1924.5691.1 vs. uniprot
Match:
A0A6H5JSI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI9_9PHAE)
HSP 1 Score: 146 bits (368), Expect = 9.140e-36
Identity = 101/252 (40.08%), Postives = 136/252 (53.97%), Query Frame = 1
Query: 91 TSRFLQAPTFACYKGLCFFYFLAWCVVWPLYYEHMY-LFLTWWAWYIGAVYFALSFITACMHLRWRRAALLMAQSLSGGGERAREGARTPLAP--RMHVPR-LERVLLVSQLFAWNLSCLGSLIVCVIFWATLYDGSAVSSVDVNAHSFFALIMVVDQFLVASEFRLRDAWKSEAVGSMYLVFNITYYCLAPPGEKLIYYILDWERAPLAAVGYSALTLFVLIPVFAAFHCGIYRLRESTFATCRKRADIAS 834
TSRFL F YK YFL W + W ++ FLT W WY YF +S ++A L WR A+ +A G+ A + A T P R P+ + L QL W+ +C+ SLIV IFW LYDG +++VD AH F A IM++DQFLVA EF+LR +A G +Y+ FN+ +Y LAP ++LIY ILDWE L A Y+ + V P+F H GI+RLRE + R+ A+
Sbjct: 20 TSRFLPQGMFVLYKLGLAVYFLYWAIFWRAVKDYNTGRFLTHWTWYATTTYFVVSALSA--FLCWRAIAVTVASGPVRDGDPAFD-APTSSRPSDRTGSPQPVPAALRHLQLALWSTACIVSLIVVSIFWGALYDGDKLTTVDEQAHVFVACIMLLDQFLVADEFKLRYVLFPQAFGVIYIFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHFGIFRLRERVYHNRLARSSKAA 268
BLAST of mRNA_L-elsbetiae_contig1924.5691.1 vs. uniprot
Match:
D7G734_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G734_ECTSI)
HSP 1 Score: 96.3 bits (238), Expect = 1.430e-19
Identity = 54/131 (41.22%), Postives = 72/131 (54.96%), Query Frame = 1
Query: 409 QLFAWNLSCLGSLIVCVIFWATLYDGSAVSSVDVNAHSFFALIMVVDQFLVASEFRLRDAWKSEAVGSMYLVFNITYYCLAPPGEKLIYYILDWERAPLAAVGYSALTLFVLIPVFAAFHCGIYRLRESTF 801
QL W+ +C+GSLIV IFW L ++DQFLVA EF+LR +A G +YL FN+ +Y LAP ++LIY ILDWE L A Y+ + V P+F H G++RLRES +
Sbjct: 23 QLVLWSTACIGSLIVVTIFWGAL---------------------LLDQFLVADEFKLRYILFPQAFGVIYLFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHLGLFRLRESVY 132
BLAST of mRNA_L-elsbetiae_contig1924.5691.1 vs. uniprot
Match:
D7G733_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G733_ECTSI)
HSP 1 Score: 99.0 bits (245), Expect = 1.150e-18
Identity = 72/265 (27.17%), Postives = 131/265 (49.43%), Query Frame = 1
Query: 64 TPDAALLAQTSRFLQAPTFACYKGLCFFYFLAWCVVWPLYYEH-----MYLFLTWWAWYIGAVYFALSFITACMHLRWRRAALLMAQSLSGGGERAREGARTPL-APRMHVPRLERVLLVSQLFAWNLSCLGSLIVCVIFWATLYDGSA-VSSVDVNAHSFFALIMVVDQFLVASEFRLRDAWKSEAVGSMYLVFNITYYCLAPPGEKLIYYILDWERAPLAAVGYSALTLFVLIPVFAAFHCGIYRLRESTFATCRKRADIASD 837
T L A TSRFLQ F +K + Y C+VW +++ + ++L W + YF +S I++ + + + +++ E + P+ R VP R L Q +W L+C+ S++V +FW T+Y+ V+SV V++ + AL+M++DQFL+A+E + + AW +Y+ +N+ YY +++ + + DW+ P A + L L +P F A H +YRLRE + + + ++ +
Sbjct: 29 TRQQGLRAGTSRFLQQGWFVGWKAVMTIY----CIVWAAWWDRGEDLDIRIYLATWTHMLATAYFVISLISSLLCMAY------LSREKPAPVEEGKPKRPPPVKGTRSPVPCYFRWL---QHISWVLTCISSMVVLSVFWMTIYESDVPVTSVYVSS-TILALLMLLDQFLIATEMKFKYAWLGLYFFVVYIFYNVIYYYEHNVEDRVTFEVFDWDERPGRACLWVFLILAFGVPGFTALHVFVYRLRERMYTSYKHNLEVIEE 279
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1924.5691.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 5
0 1 Expect = 1.89e-77 / Id = 46.91 Expect = 1.11e-38 / Id = 34.25 Expect = 9.14e-36 / Id = 40.08 Expect = 1.43e-19 / Id = 41.22 Expect = 1.15e-18 / Id = 27.17 Sequence D7G736_ECTSI A0A6H5JMZ5_9PHAE A0A6H5JSI9_9PHAE D7G734_ECTSI D7G733_ECTSI
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Arthropoda
Seed ortholog score 70.5
Seed ortholog evalue 1.6e-09
Seed eggNOG ortholog 7227.FBpp0079362
Hectar predicted targeting category signal anchor
GOs GO:0000768,GO:0005575,GO:0006949,GO:0007520,GO:0008150,GO:0009653,GO:0009987,GO:0014902,GO:0016020,GO:0030154,GO:0032502,GO:0042692,GO:0048646,GO:0048856,GO:0048869,GO:0051146,GO:0061061
EggNOG free text desc. Protein rolling stone-like
EggNOG OGs 2BZ8C@1,2S8CX@2759,3A92Y@33154,3BTZA@33208,3DATV@33213,3SNY7@50557,4214F@6656,455M2@7147,45NIK@7214
COG Functional cat. S
Best tax level Drosophilidae
Best eggNOG OG NA|NA|NA
Ec32 ortholog description conserved unknown protein
Ec32 ortholog Ec-01_011180.1
Exons 7
Model size 2001
Cds size 939
Stop 1
Start 1
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815799.04208-UTR-L-elsbetiae_contig1924:6170..7187 1622815799.04208-UTR-L-elsbetiae_contig1924:6170..7187 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig1924 6171..7187 -
1691683110.1394598-UTR-L-elsbetiae_contig1924:6170..7187 1691683110.1394598-UTR-L-elsbetiae_contig1924:6170..7187 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig1924 6171..7187 -
1622815799.1309311-UTR-L-elsbetiae_contig1924:13273..13318 1622815799.1309311-UTR-L-elsbetiae_contig1924:13273..13318 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig1924 13274..13318 -
1691683110.2386954-UTR-L-elsbetiae_contig1924:13273..13318 1691683110.2386954-UTR-L-elsbetiae_contig1924:13273..13318 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig1924 13274..13318 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815799.0559924-CDS-L-elsbetiae_contig1924:7187..7389 1622815799.0559924-CDS-L-elsbetiae_contig1924:7187..7389 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1924 7188..7389 -
1691683110.149351-CDS-L-elsbetiae_contig1924:7187..7389 1691683110.149351-CDS-L-elsbetiae_contig1924:7187..7389 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1924 7188..7389 -
1622815799.0701122-CDS-L-elsbetiae_contig1924:7693..7935 1622815799.0701122-CDS-L-elsbetiae_contig1924:7693..7935 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1924 7694..7935 -
1691683110.1595461-CDS-L-elsbetiae_contig1924:7693..7935 1691683110.1595461-CDS-L-elsbetiae_contig1924:7693..7935 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1924 7694..7935 -
1622815799.081904-CDS-L-elsbetiae_contig1924:8535..8598 1622815799.081904-CDS-L-elsbetiae_contig1924:8535..8598 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1924 8536..8598 -
1691683110.1760414-CDS-L-elsbetiae_contig1924:8535..8598 1691683110.1760414-CDS-L-elsbetiae_contig1924:8535..8598 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1924 8536..8598 -
1622815799.0914862-CDS-L-elsbetiae_contig1924:9689..9928 1622815799.0914862-CDS-L-elsbetiae_contig1924:9689..9928 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1924 9690..9928 -
1691683110.1871483-CDS-L-elsbetiae_contig1924:9689..9928 1691683110.1871483-CDS-L-elsbetiae_contig1924:9689..9928 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1924 9690..9928 -
1622815799.1011279-CDS-L-elsbetiae_contig1924:10511..10617 1622815799.1011279-CDS-L-elsbetiae_contig1924:10511..10617 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1924 10512..10617 -
1691683110.2001715-CDS-L-elsbetiae_contig1924:10511..10617 1691683110.2001715-CDS-L-elsbetiae_contig1924:10511..10617 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1924 10512..10617 -
1622815799.110969-CDS-L-elsbetiae_contig1924:12893..12953 1622815799.110969-CDS-L-elsbetiae_contig1924:12893..12953 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1924 12894..12953 -
1691683110.2183216-CDS-L-elsbetiae_contig1924:12893..12953 1691683110.2183216-CDS-L-elsbetiae_contig1924:12893..12953 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1924 12894..12953 -
1622815799.1210825-CDS-L-elsbetiae_contig1924:13246..13273 1622815799.1210825-CDS-L-elsbetiae_contig1924:13246..13273 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1924 13247..13273 -
1691683110.2269573-CDS-L-elsbetiae_contig1924:13246..13273 1691683110.2269573-CDS-L-elsbetiae_contig1924:13246..13273 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1924 13247..13273 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1924.5691.1
>prot_L-elsbetiae_contig1924.5691.1 ID=prot_L-elsbetiae_contig1924.5691.1|Name=mRNA_L-elsbetiae_contig1924.5691.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=313bp
MGCWSLTPDAALLAQTSRFLQAPTFACYKGLCFFYFLAWCVVWPLYYEHM YLFLTWWAWYIGAVYFALSFITACMHLRWRRAALLMAQSLSGGGERAREG ARTPLAPRMHVPRLERVLLVSQLFAWNLSCLGSLIVCVIFWATLYDGSAV SSVDVNAHSFFALIMVVDQFLVASEFRLRDAWKSEAVGSMYLVFNITYYC LAPPGEKLIYYILDWERAPLAAVGYSALTLFVLIPVFAAFHCGIYRLRES TFATCRKRADIASDVLHDHLLGAADGGSGGSGSSSGNSSSTPRDSVSSRE EEAEAGTNVVGV* back to top mRNA from alignment at L-elsbetiae_contig1924:6171..13318-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1924.5691.1 ID=mRNA_L-elsbetiae_contig1924.5691.1|Name=mRNA_L-elsbetiae_contig1924.5691.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7148bp|location=Sequence derived from alignment at L-elsbetiae_contig1924:6171..13318- (Laminarionema elsbetiae ELsaHSoW15)GGTTAGTCAGTTGGAGAGGGTGTCCTCCGGCAGCAGGCGCTCGGG ATGGG
TTGCTGGTCTCTGACGCCAGAT GTGAGTTCTTCGGCCAGATGTTTTGCCC
CTTGGGGTAAATGTATTCATGTGATGCAATAGAGTAAAATCAGTGCCGAG
ATCATGCATACATACATCCCACAACAGTTGTAGTCATGGTCAGTAGCAGC
AGAACGTTGTCTAGCAGACAAACCCTATGACGTAAAGTGTGTTTCCTTTG
CACCCGCCTCGCAGATTTTTCTCCCACTGGACGTGCATCGTTTATCGAAG
CGTGTCTCGTTCGCACATCAACATGCTTTGCCATATTGTACGGCCTGCAC
ACACACACACGGCAGGCAGCTCTCCTGGCCCAGACGTCACGGTTCTTGCA
GGCTCCAACGTTTGCCTGCTACAAG GTGTGTGCAAAGCAGGCCAACATAC
ACCGCAGTAGGGTGGTGGTATGGTGGCTGTTTGTGAGAAGAGAATCGCAC
CTTCTACATAGCAGGCACTACATATGTAGCCGGTCGCCCCGGTAGTCTAG
TTGGTATCCACGCAACCTTCTAATGCACCAGGTCCCGTGTTCGAGCCCCA
GCGAAGCGAGTTTTTTCTCTCATTCGTTCCTGGCAAAATTGAAAGCGATT
TCGTGAGTAAATACTACTTCGACTTCGTTGTTGACGAGGGTGGGGAATGC
TGAACCCTGCTCGCGATAAAAAACACCCTAGGCAGGCACCGCAGGAGGGG
GTCCAACCCCCCCCCTCCTATGTGACCCCGGTTGGGTCGTCTAGCTAGAG
TAGAAATGGAGGATGGGGGCCAGAGGGCAGACGACAAAAAGCCAATAATG
GGCAGACAATAAAATAAAAAAATAAAAAATGTAGCGACCGCAAAACACAC
AAGATACCACCCCCCCTCCGGTTAAACATCTGAGCGCCTGGTTTTCGTCA
CCCGGGGTGGTATTCTGTAGGGGGGGTGATAAAGAGCGTGTGTAGTGGGG
GGCATCGAAGGGGAGTGATAACGGCGGGGTATTACCGTACGTATGTATGT
ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTTGTCTTCACA
TGAAAAACCGTTCCGATCTCTCCATCCAGTACCTCTCGATGTCCGTACTA
ATCCAACACTTCATGCGGTCAATTCCCGTGGTCACAGGCTAACTGATACC
CAAGAAAAGGTACATGAAAAATAAAATGGACCCGAAGGGCCAGCAAAGCA
ACAATAAAACAGATATATCGAATCTGGAGCCCTCCGCTCCCCTCTACACG
CTATGTGAGGTAAAAACAAAACTGGAACCGTGCCGCATTTCAATGCTGAC
TGCTGCTGTAGCAGCAAGGGGGGTGATAGCAAGGGGAGGTGTCTACGTAA
GAACCTGAACACCGCCGTCCTGCACACATGAAACTCGCGCTGTACAACAT
CCACATGTAGGTACGCCATCAAACCCAGGTTGAACTGACAAGAGTAAATA
CGTAAATACCAAAATAACCCATGGAAAGATGGGCCATCAACACTTTGTGT
GGCACAAGATTCCAGATTGCATGAAGGTTGAGAGCCGTCTGCGTTCCCCG
CTTACATCTCCGTAATTACCGATATCCTTTTTCTACCCTGGCGCGCTTCA
AGCGAGTGAAAAAAGTATATCAACCATAAAACCGGGCCCCACGAAGACTG
CCGTTGTCTACCTACTAGTACTCAGCAGTGAGTTTAAAATAATAGCATGC
CCTGTGTCGGCATGCCAACCGAACACACTTGGTTATGATAAGTACACCGC
ACGCACTTTTGTAAGGCACGAGCAAAAACAAAGAAGGAAACAAAAATGCC
AGCAGAACCGACCCCAGTTGGGTTGGTCTCACAACCGCCGAATACCACGC
GGGGTGATAGCAGGGGCCCATCGGATTTATGCGGCGTAACCTCAGGGGGA
GGGTGTTATCTTCAGTGGCCCGGGCGGTATTTGGGCCTCGGTTCTGTGCC
TGGAAATATCATCACCGGGAGTGGTATTTTGCAAGGAGGGTGGGATCTTG
TGGTTTACGGTACATAAGACTATCTGCATGTTGTACACGAACAGGAAGTT
CCCGCGTGTGCATCTGTCTCTCTGCTAGACGGCAGTCGGCGGTGTGTGTG
TGTTCTTCCCATTTATTTTGGCGACAGTCCCCCCATGGAGACGTGTACTA
TCCCTTGCGGTGGGTGTACTTAGAGGTACTACACTTTGCAGTGCATTTGT
CTGTACAACTAGAACCAACCGGGGTCACACAGGAGGAGGTGAACACTGGG
GCTTTTTGTTCTTTTTTTTTTCTTTTTTTGCCCCACCTTCCTCCTGCTGT
TGTTGCCTTGGGTTTTATCGCGAGAAGGATTCAGCTGTCCCTTTCCCTCG
TCAACGTGATTACGTCGAAGTTTGGTACTCACGAGCTTTTCAGCTTTTGT
CTCTTTCACCTGCGAAGTGGCAACAGAAACACTTCTGCTTGGGATTGAAC
TCCAGACTTTGCTGCTATTCGGTTCGAGGTTAAACCACTACATAGACCAC
CGGGGCGACCGACGGTACTTACGGTATGTAGATGGGAGCTAAGATCCCTG
AAGTGCGATCTGGGGTTCAGCAATGGGTTAACTCACCCCGATTACCCCCC
GACTGGCCTCTCTCACACTCGTCACCCTCACATGCTCGGTGCTCCGTGCA
GGGGCTCTGCTTCTTCTACTTCTTGGCGTGGTGTGTGGTATGGCCACTGT
ATTACGAACACATGTATTTGTTCCTAACTTGGTGGGCGTGGTACATCGGA
GCTGTAT GTGAGTGTGGTACATGCGCGTAGATTCGTTCAGTGGTGACGCT
TTCCCTCCTCGCCCCCTTCGAGTAGATACTGGTAGATACCCGTGTTGTTT
GGTGTTGCGAAAACAGCCACAGTCTATCTAGATAAACCACCTCGGTTGCG
TGCACCACCGGCGCCGCGGCTGCCGCTCCATGAGAATCACATGCCGGCAC
ATGACGATGCAGTAACGCAGTGGCCAACCCACCCCCATGCCCCTGGTGTC
AAAAGCCGATGATTCGCACGACCGAATCGGTGGTTAAGTACCTACGACGA
CGTGACTACTGTCACGCACATACCTATGTATATATCGTACGAGTACCTGA
GAAGCCGTGAGGGTTTTCCGGCACCACCGTTTTGCTGTTGCCCTTAGGAT
TGCCCGTGTAGTCCACCGGTGTCCGAATCTCAGCGATATGTTGGCTATGC
TTATTGCCAGCTGCACCCCGCCACAGGAGCAGAATTGGCAACCGCAGCAC
GTTCAAAATCGCTGCTGGTCAGAGAAAGGAGAACAGCACTGGAGGACCAC
TCCGACTATAAACCCGCTCAATCATCTTCCTCCCGCGCAGATTTCGCCCT
TTCTTTCATCACGGCGTGTATGCATCTGAGGTGGCGACGTGCAGCGCTGC
TTATGGCCCAGTCGCTTTCGGGCGGCGGCGAACGAGCACGAGAAGGCGCG
CGAACCCCGTTGGCGCCGCGGATGCACGTTCCTCGTCTGGAGCGGGTCCT
CTTGGTATCGCAGCTGTTCGCCTGGAATCTTTCCTGCCTGGGCTCCCTGA
TCGTCTGCGTCATCTTCTGGGCAACTTTG GTGAGGGAAACCTACGCTGTA
CTCAGCAAAATGTCTTTCCCTGCCGTTTGCATGTCCCACGCACGCTGGTC
ATTCTGCTGTGAGGAGGAGGGGGTGTTTTTCTGCCCGCGAGTTAACGCGT
CGTTTTTTTTTTCGTCGGCGCACGTTATGGTCTTCCCGTGAATTGCACCA
TTTTCGGTGTTTGTGGACGGACGCCGGAGAGGGTGGCGAGAGAGACTTGT
GTTTTCTCTCGCCAACAGCCCTGTTTTGCGATTCGACAGGGCTTTCTTCC
GTGGTCCCAGTCGGAGGGGGGTGGATATGAGGGTACATAGGTACTGGATC
CCGGCGGTAAATGGTTGACTCACGGCTCTGATTACTAGTAATAGAAGTAT
AGAGCGAAGACCTCAGGTATCTCTGCGGGGGCATGGTGCGTCCACGTACG
TATATCCGCACGACGCCAAGCATCCACGTAGCCCCAAAGATTCTGCCAAT
TGTATCTAGTGCCTAGTACAACCTGTAGGATAGGCGACAAAGGCCGGTTA
CCTTCATTCATGCATGTGTGCTTCTGTGATAAAAAGTTTTTGTTCGCGCT
CCGTCTTGGAAAAGTGAGGCATGGAGGGGAGGATAAGGGTATGTCCCAGG
TGTGACTAAGCTCAGCAAAACGTAAGCTCAGCAAAACGTTGAGAACTGGG
TGGAACCATCGAAGCACGGTGCAAACGAGAGAGTCGATCGGGCGCCAAGA
GCCCGAAATGTTGTTTCTACTGAGTGTAGCCCTCGATGATTGCTTTACTT
TGCCCTCCGTCCTTGGGCCTCGTAACCCACCAACATGCGAGCTTACGCAC
GATGTTGGAATAATTTCGACAGCACGAATCGAGAAGGCTCAGCGCGTCAT
TCATACGGTCTTTGCTGAAACCTCAAAGCACCATTTGAGGTATGCCGCGT
ACCGGTACACGGTTGTCTCGCCACATCTAAAATCCCTCGCTTTTTTATTT
CATTGTCGGTCGTGTTCGTTCTTCTGTGTTTTGCTTCCTCCGTTGCTCGG
CGATGCGTGTTGCGGTGTTTAAACCTTGCCCTTTGGTGTGCAACGATGCA
ACGGCGATTGATGGATGCAGTATGACGGGTCGGCGGTTTCGTCGGTGGAC
GTCAATGCGCACAGCTTCTTCGCGCTTATCATG GTAAGTGAGCTGTTTTT
GTTTTTCCCGCGCGAGCTACAATCGATCTTTCGAATCATTTTCGAACCGT
ACGGCGGCATGTACGCTTGCAGTTTCGCCTTGCTGCATGCTTTATAGAGC
AGGTAGCGCGACACGTGGCGGCCGAGTACCCGCAAGGGGTCAGGCCGGCT
GCGTGCTCCCTAGCTCTAGCCGTCCTCTGTTATGGGATGGGCAGCTGCCA
CTGCGCCGTGCCGTACGCAAGCGTAGGTCACCTCACCTACAAGCTTGTTC
GGTGGCGGAAGAGCGGTCGAGTCAGCGTAAAATGTCTAGCAAAATAACCA
CCCCAGGCGTTTTAGTTTGTGGCCCTCAATAGCTCGCGACAGTAGTCAGT
CCTTGGGGTCAGCCCTTCATCGAAAAGCTTGCGACTCGGGCACGCACACG
TTCGGCCCGCCTCAGAAATATGTTTATCGACGAGATAGTCAGGTGGTGTA
ACCGCGATCGAACGCTTAATTTTCAGACACTCTAGATTCTGGCGTCTCCG
CTTGCTGTCGCCGCCCGCAACTCACAGAGCCACGATATATCTGTTTTGTG
CCGTTTTGATGCATCCAACAACCCCACACGCAGGTGGTTGATCAGTTTCT
CGTGGCCTCGGAGTTCAGGCTACGAGATGCCTGGAAATCGGAGGCGGTCG
GCTCGATGTACCTCGTCTTCAACATCACTTATTACTGCCTCGCGCCGCCG
GGAGAGAAGCTGATTTACTATATTTTGGATTGGGAACGGGCACCGTTGGC
GGCGGTGGGGTACTCGGCGCTGACGCTGTTCGTATTGATACCGGTCTTCG
CCGCTTTCCACTGCGGTATCTACAG GTGAGATGGTATATTATCCCGAGGG
GCATGCCTGTCTTTTCCCCAACTTTTGTTGTGTCTGTGCAGCTGGTGGGC
GCAGCTGCGTTGCGACGATCCAAGGTTGCTGCACAGGCAGCCGTGATGGC
GTCGTCATAGGACTTCTTGGCACCAGGCTTAAAATCGATCTAGACACATT
GGCTCGCACGTACATAGCGCGTACACATGTATCGCTCTAGTTGACCGGCG
TTGTTGACGTATTTTGGTTGTTTTGCGGCTGCTCTCCCTCTCCCCCCCCC
CGTCCGCGCGACTCACCGTCCCCACTCAGACTGAGAGAGTCCACCTTCGC
CACGTGCCGCAAGAGAGCAGACATCGCGTCTGACGTGCTTCACGACCACC
TCCTTGGTGCCGCGGACGGCGGCAGCGGTGGCAGCGGCAGCAGCAGCGGC
AACAGCAGCAGCACGCCGCGGGACTCCGTGAGCTCTCGCGAAGAAGAAGC
AGAGGCCGGGACCAACGTTGTTGGCGTGTGA TGTGCTTTGTTTGGCCAAC
ATATAGACTGCGGTCGGAAATATCTGGCCGCACATGGGCGTAATGGCTAC
GGTAACTGACCTTTGTATTTAGAGAGGGATAGATCTATCTGGTCTAGGTG
GGGAAGTACACGCTCTTGGTTAGCTACTGCGTCTGCTGGAAAATCCAGCG
GGAGATGGTTGGAAGGCATCGGTATGTGCGTTGTGCCTCGTTGTTTTGTG
CACGTACGCGGTGAGTGGGCAAGATCTCGTCCGCTTTATTTCTTGTTGTA
TGTGTCTGGAAAAGTTGTGATCACCGGTTGGCAGCAGCGATTTTTTCAGG
AGTCCTGATGGAAACCAACCTTGGACTCTGATACTCTGATCCGGCCTCTC
CCTCTTGCTTATTTCGGGGTTGTTCATTTTTCAGTATCCTTTTTTAGGGT
GGGCTATCCTGTGACCATGCACGGGAATCGACCACGTCAGTGTTGGATTA
CATAGTACATTATGGAGGTGTACTAGATAGAGATATCGGAACGTGTTTTA
ATGTGAAAACAACACACACACACACAGTTTTGACCACATGACTCGTATCT
TAGTAAATTGTGCGTCAAAACACCTACCAGTAGTATTACCTTTATGCTGC
TGCGCGATTTGGAAGGCGAATCGGAGTTTATCGTCGGCGAGGAGAGAGGG
CAGAGGGGTGAGAGGCTGCTCGAATCAGCCACATATTAATTTATTGGTGA
AAATTAGAGCGTTGCCACGCGGCGTTCCAGACTTGCCATCCTCAGAAAAG
AAACTTTGTCGAAAGTGCACGCGTTTTGAAAAAACGTGAGATGTGCGGTG
CTTTGTTGGCGTACTAGATAGAGATATCGGAACGGTTTTTAATGTGAAAA
CACACACACACAGTTGACCACAGACTCGTATCTTAATAAATTGTGCGTCA
AAACACCTACCGGTTTTGTATTACCTTTATGCTGCTGCGCGATTTGGAAG
GCGAATCGGAGTTCATCGTCGGCGAGGAGAGAGGGCAGAGGGATGAGA back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1924:6171..13318-
>mRNA_L-elsbetiae_contig1924.5691.1 ID=mRNA_L-elsbetiae_contig1924.5691.1|Name=mRNA_L-elsbetiae_contig1924.5691.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1878bp|location=Sequence derived from alignment at L-elsbetiae_contig1924:6171..13318- (Laminarionema elsbetiae ELsaHSoW15) ATGGGTTGCTGGTCTCTGACGCCAGATATGGGTTGCTGGTCTCTGACGCC AGATGCAGCTCTCCTGGCCCAGACGTCACGGTTCTTGCAGGCTCCAACGT TTGCCTGCTACAAGGCAGCTCTCCTGGCCCAGACGTCACGGTTCTTGCAG GCTCCAACGTTTGCCTGCTACAAGGGGCTCTGCTTCTTCTACTTCTTGGC GTGGTGTGTGGTATGGCCACTGTATTACGAACACATGTATTTGTTCCTAA CTTGGTGGGCGTGGTACATCGGAGCTGTATGGGCTCTGCTTCTTCTACTT CTTGGCGTGGTGTGTGGTATGGCCACTGTATTACGAACACATGTATTTGT TCCTAACTTGGTGGGCGTGGTACATCGGAGCTGTATATTTCGCCCTTTCT TTCATCACGGCGTGTATGCATCTGAGGTGGCGACGTGCAGCGCTGCTTAT GGCCCAGTCGCTTTCGGGCGGCGGCGAACGAGCACGAGAAGGCGCGCGAA CCCCGTTGGCGCCGCGGATGCACGTTCCTCGTCTGGAGCGGGTCCTCTTG GTATCGCAGCTGTTCGCCTGGAATCTTTCCTGCCTGGGCTCCCTGATCGT CTGCGTCATCTTCTGGGCAACTTTGATTTCGCCCTTTCTTTCATCACGGC GTGTATGCATCTGAGGTGGCGACGTGCAGCGCTGCTTATGGCCCAGTCGC TTTCGGGCGGCGGCGAACGAGCACGAGAAGGCGCGCGAACCCCGTTGGCG CCGCGGATGCACGTTCCTCGTCTGGAGCGGGTCCTCTTGGTATCGCAGCT GTTCGCCTGGAATCTTTCCTGCCTGGGCTCCCTGATCGTCTGCGTCATCT TCTGGGCAACTTTGTATGACGGGTCGGCGGTTTCGTCGGTGGACGTCAAT GCGCACAGCTTCTTCGCGCTTATCATGTATGACGGGTCGGCGGTTTCGTC GGTGGACGTCAATGCGCACAGCTTCTTCGCGCTTATCATGGTGGTTGATC AGTTTCTCGTGGCCTCGGAGTTCAGGCTACGAGATGCCTGGAAATCGGAG GCGGTCGGCTCGATGTACCTCGTCTTCAACATCACTTATTACTGCCTCGC GCCGCCGGGAGAGAAGCTGATTTACTATATTTTGGATTGGGAACGGGCAC CGTTGGCGGCGGTGGGGTACTCGGCGCTGACGCTGTTCGTATTGATACCG GTCTTCGCCGCTTTCCACTGCGGTATCTACAGGTGGTTGATCAGTTTCTC GTGGCCTCGGAGTTCAGGCTACGAGATGCCTGGAAATCGGAGGCGGTCGG CTCGATGTACCTCGTCTTCAACATCACTTATTACTGCCTCGCGCCGCCGG GAGAGAAGCTGATTTACTATATTTTGGATTGGGAACGGGCACCGTTGGCG GCGGTGGGGTACTCGGCGCTGACGCTGTTCGTATTGATACCGGTCTTCGC CGCTTTCCACTGCGGTATCTACAGACTGAGAGAGTCCACCTTCGCCACGT GCCGCAAGAGAGCAGACATCGCGTCTGACGTGCTTCACGACCACCTCCTT GGTGCCGCGGACGGCGGCAGCGGTGGCAGCGGCAGCAGCAGCGGCAACAG CAGCAGCACGCCGCGGGACTCCGTGAGCTCTCGCGAAGAAGAAGCAGAGG CCGGGACCAACGTTGTTGGCGTGTGAACTGAGAGAGTCCACCTTCGCCAC GTGCCGCAAGAGAGCAGACATCGCGTCTGACGTGCTTCACGACCACCTCC TTGGTGCCGCGGACGGCGGCAGCGGTGGCAGCGGCAGCAGCAGCGGCAAC AGCAGCAGCACGCCGCGGGACTCCGTGAGCTCTCGCGAAGAAGAAGCAGA GGCCGGGACCAACGTTGTTGGCGTGTGA back to top