prot_L-elsbetiae_contig1924.5691.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1924.5691.1
Unique Nameprot_L-elsbetiae_contig1924.5691.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length313
Homology
BLAST of mRNA_L-elsbetiae_contig1924.5691.1 vs. uniprot
Match: D7G736_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G736_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 1.140e-81
Identity = 152/324 (46.91%), Postives = 197/324 (60.80%), Query Frame = 0
Query:    1 MGCWSLT-PDAALLAQTSRFLQAPTFACYKGLCFFYFLAWCVVWPLYYEHMYLFLTWWAWYIGAVYFALSFITACMHLR-WRRAALLMA-QSLSGGGERAREG---------ARTPLAPRMHVPRLERVLLVSQLFAWNLSCLGSLIVCVIFWATLYDGSAVSSVDVNAHSFFALIMVVDQFLVASEFRLRDAWKSEAVGSMYLVFNITYYCLAPPGEKLIYYILDWERAPLAAVGYSALTLFVLIPVFAAFHCGIYRLRESTFATCRKRADIASDVLHDHLLGAADGGSGGXXXXXXXXXSTPRDSVSSREEEAEAGTNVVGV 312
            MGC S+T PD AL A TSRFL+   F  +KGL   YFL WC +WPL Y  MYLF T+W WY G  YFALSF TAC H R W  A    A  + S GG   R G           TP A R  +  LE+ +L  QLF WN++CLGSL V +I+W++LY G+ ++SVD+NAH+  A +MV DQ LVA+ FR+RD WK+E     YLV+++ +Y L    ++LIY ILDW+R    A  YS   +FVLIP  +  H  I+RLRES +ATCR+RA+ +S VL+D LL A DGGS           ST  +SV+S   +   GT++  +
Sbjct:    1 MGCCSVTAPDLALRAATSRFLKPGPFVAFKGLFVAYFLIWCFLWPLDYTSMYLFATYWVWYTGTAYFALSFATACAHFRRWSAATQARAPDNGSAGGGSDRPGPSWSNLTGDVSTP-ALRTRIHPLEQAVLAIQLFTWNVACLGSLFVAIIYWSSLYTGTPITSVDMNAHTLIAFVMVADQMLVATPFRIRDMWKAEVFAITYLVYSLLWYFLE---QELIYVILDWDRHFWEAFSYSVAGIFVLIPATSVLHYYIFRLRESIYATCRQRAEASSGVLNDRLLSAEDGGS-----------STQSESVTSHVPQT--GTDLAAI 307          
BLAST of mRNA_L-elsbetiae_contig1924.5691.1 vs. uniprot
Match: A0A6H5JMZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ5_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 2.010e-41
Identity = 87/254 (34.25%), Postives = 136/254 (53.54%), Query Frame = 0
Query:    6 LTPDAALLAQTSRFLQAPTFACYKGLCFFYFLAWCVVWPLY--YEHMYLFLTWWAWYIGAVYFALSFITACMHLRWRRAALLMAQSLSGGGERAREGARTPLAPRMHVPRLE--RVLLVSQLFAWNLSCLGSLIVCVIFWATLYDGSAVSSVDVNAHSFFALIMVVDQFLVASEFRLRDAWKSEAVGSMYLVFNITYYCLAPPGEKLIYYILDWERAPLAAVGYSALTLFVLIPVFAAFHCGIYRLRESTFATC 255
            L P+  + A TSRFL   +F CYK +   YF+ WC  WP     +  + F+T+W WY+ A+YF +S  TA   L            ++  G      A  P     + P     R LL  Q+F+WN++C+GSL++  +FW  L+D + ++S DVNAH   A +M +DQ LVA++F  +    S     +Y+ FNI ++  AP  E++IY  +DW  +   +  ++A+  FVL+P+    H  ++RLRE  + TC
Sbjct:   13 LEPNDPVRAVTSRFLSQRSFLCYKVIATIYFVFWCYFWPFGEDIDDAHKFVTYWGWYMAAIYFLVSTATAYSFL---------GSPMASDGPVRGTHAVAPHRGNRNQPLSSNRRALLGFQVFSWNVACVGSLVIVTVFWVALFDNTPLTSTDVNAHILIAPVMAIDQLLVATKFERKQMLASFLFSIVYVAFNIVFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVTFVLVPLGGLIHYCVFRLREYIYETC 257          
BLAST of mRNA_L-elsbetiae_contig1924.5691.1 vs. uniprot
Match: A0A6H5JSI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI9_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 2.620e-38
Identity = 101/252 (40.08%), Postives = 136/252 (53.97%), Query Frame = 0
Query:   16 TSRFLQAPTFACYKGLCFFYFLAWCVVWPLYYEHMY-LFLTWWAWYIGAVYFALSFITACMHLRWRRAALLMAQSLSGGGERAREGARTPLAP--RMHVPR-LERVLLVSQLFAWNLSCLGSLIVCVIFWATLYDGSAVSSVDVNAHSFFALIMVVDQFLVASEFRLRDAWKSEAVGSMYLVFNITYYCLAPPGEKLIYYILDWERAPLAAVGYSALTLFVLIPVFAAFHCGIYRLRESTFATCRKRADIAS 263
            TSRFL    F  YK     YFL W + W    ++    FLT W WY    YF +S ++A   L WR  A+ +A      G+ A + A T   P  R   P+ +   L   QL  W+ +C+ SLIV  IFW  LYDG  +++VD  AH F A IM++DQFLVA EF+LR     +A G +Y+ FN+ +Y LAP  ++LIY ILDWE   L A  Y+   + V  P+F   H GI+RLRE  +     R+  A+
Sbjct:   20 TSRFLPQGMFVLYKLGLAVYFLYWAIFWRAVKDYNTGRFLTHWTWYATTTYFVVSALSA--FLCWRAIAVTVASGPVRDGDPAFD-APTSSRPSDRTGSPQPVPAALRHLQLALWSTACIVSLIVVSIFWGALYDGDKLTTVDEQAHVFVACIMLLDQFLVADEFKLRYVLFPQAFGVIYIFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHFGIFRLRERVYHNRLARSSKAA 268          
BLAST of mRNA_L-elsbetiae_contig1924.5691.1 vs. uniprot
Match: D7G734_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G734_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 1.150e-20
Identity = 54/131 (41.22%), Postives = 72/131 (54.96%), Query Frame = 0
Query:  122 QLFAWNLSCLGSLIVCVIFWATLYDGSAVSSVDVNAHSFFALIMVVDQFLVASEFRLRDAWKSEAVGSMYLVFNITYYCLAPPGEKLIYYILDWERAPLAAVGYSALTLFVLIPVFAAFHCGIYRLRESTF 252
            QL  W+ +C+GSLIV  IFW  L                     ++DQFLVA EF+LR     +A G +YL FN+ +Y LAP  ++LIY ILDWE   L A  Y+   + V  P+F   H G++RLRES +
Sbjct:   23 QLVLWSTACIGSLIVVTIFWGAL---------------------LLDQFLVADEFKLRYILFPQAFGVIYLFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHLGLFRLRESVY 132          
BLAST of mRNA_L-elsbetiae_contig1924.5691.1 vs. uniprot
Match: D7G733_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G733_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 6.220e-20
Identity = 72/265 (27.17%), Postives = 131/265 (49.43%), Query Frame = 0
Query:    7 TPDAALLAQTSRFLQAPTFACYKGLCFFYFLAWCVVWPLYYEH-----MYLFLTWWAWYIGAVYFALSFITACMHLRWRRAALLMAQSLSGGGERAREGARTPL-APRMHVPRLERVLLVSQLFAWNLSCLGSLIVCVIFWATLYDGSA-VSSVDVNAHSFFALIMVVDQFLVASEFRLRDAWKSEAVGSMYLVFNITYYCLAPPGEKLIYYILDWERAPLAAVGYSALTLFVLIPVFAAFHCGIYRLRESTFATCRKRADIASD 264
            T    L A TSRFLQ   F  +K +   Y    C+VW  +++      + ++L  W   +   YF +S I++ + + +      +++      E  +     P+   R  VP   R L   Q  +W L+C+ S++V  +FW T+Y+    V+SV V++ +  AL+M++DQFL+A+E + + AW       +Y+ +N+ YY      +++ + + DW+  P  A  +  L L   +P F A H  +YRLRE  + + +   ++  +
Sbjct:   29 TRQQGLRAGTSRFLQQGWFVGWKAVMTIY----CIVWAAWWDRGEDLDIRIYLATWTHMLATAYFVISLISSLLCMAY------LSREKPAPVEEGKPKRPPPVKGTRSPVPCYFRWL---QHISWVLTCISSMVVLSVFWMTIYESDVPVTSVYVSS-TILALLMLLDQFLIATEMKFKYAWLGLYFFVVYIFYNVIYYYEHNVEDRVTFEVFDWDERPGRACLWVFLILAFGVPGFTALHVFVYRLRERMYTSYKHNLEVIEE 279          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1924.5691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G736_ECTSI1.140e-8146.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JMZ5_9PHAE2.010e-4134.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSI9_9PHAE2.620e-3840.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G734_ECTSI1.150e-2041.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G733_ECTSI6.220e-2027.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039860Protein rolling stonePANTHERPTHR12242:SF1LD06593P-RELATEDcoord: 17..263
NoneNo IPR availablePANTHERPTHR12242UNCHARACTERIZEDcoord: 17..263
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 248..312
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 186..205
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 206..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..174
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 144..154
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 225..247
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 175..185
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..45
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 78..116
NoneNo IPR availableTMHMMTMhelixcoord: 57..79
NoneNo IPR availableTMHMMTMhelixcoord: 25..47
NoneNo IPR availableTMHMMTMhelixcoord: 160..178
NoneNo IPR availableTMHMMTMhelixcoord: 191..213
NoneNo IPR availableTMHMMTMhelixcoord: 123..145
NoneNo IPR availableTMHMMTMhelixcoord: 223..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1924contigL-elsbetiae_contig1924:7188..13273 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1924.5691.1mRNA_L-elsbetiae_contig1924.5691.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1924 6171..13318 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1924.5691.1 ID=prot_L-elsbetiae_contig1924.5691.1|Name=mRNA_L-elsbetiae_contig1924.5691.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=313bp
MGCWSLTPDAALLAQTSRFLQAPTFACYKGLCFFYFLAWCVVWPLYYEHM
YLFLTWWAWYIGAVYFALSFITACMHLRWRRAALLMAQSLSGGGERAREG
ARTPLAPRMHVPRLERVLLVSQLFAWNLSCLGSLIVCVIFWATLYDGSAV
SSVDVNAHSFFALIMVVDQFLVASEFRLRDAWKSEAVGSMYLVFNITYYC
LAPPGEKLIYYILDWERAPLAAVGYSALTLFVLIPVFAAFHCGIYRLRES
TFATCRKRADIASDVLHDHLLGAADGGSGGSGSSSGNSSSTPRDSVSSRE
EEAEAGTNVVGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039860Rost