mRNA_L-elsbetiae_contig1874.5483.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1874.5483.1 vs. uniprot
Match: A0A6H5JGC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGC1_9PHAE) HSP 1 Score: 317 bits (813), Expect = 2.760e-104 Identity = 171/319 (53.61%), Postives = 198/319 (62.07%), Query Frame = 1 Query: 22 MSEEGVGGDESLRMTRSFTIFHALVRLFGTGNLPSSLVLHVLGADHREGTTPEETRSVFAELFQRLGRDEHVRDLDLLFCGPNIALRLHDTLHSFSCSHPPAERGQHVSTTPISHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTLVVKLRYNSGLYHDVSELFPAPNALFLFNAGLWGYDDWEPTLEHVLDCGCKSSACRETGDVINRP-----------------PVVVTSYCPEEASDDMETIQRVVVLEGDERCKCLV------VSGLEWLWKPEVNPHRSLVPRQTRCGVEGRVLFENQSWQALR 909 MSEE +G DESLR+TRSFTIFHAL+R+FG GNLPS LVLH+LGADHREGTTP++TR++F +L QRLG DEHV DLD + CGPNI LH T H+F H PA + + G L V+L YNSGLYHDVS LF P+A+FLFNAGLWGYDDWEPTLE++L GC +AC + V NR PVVVTSYC EEASDDMET++RV++ E + V GLEWLWKPEVNPHRS VPR+T CGVEGR LFEN SWQALR Sbjct: 17 MSEECIGEDESLRLTRSFTIFHALMRIFGCGNLPSHLVLHILGADHREGTTPQQTRAMFVDLLQRLGHDEHVLDLDFVLCGPNIPPHLHGTRHTFVHHHAPAAAKMDQNICGLD------------GVWQESPAATPGMRTTRCCDSPPSTAGALTVRLWYNSGLYHDVSGLFATPDAIFLFNAGLWGYDDWEPTLEYIL--GCDRAAC-PSDHVGNRQASPPPIPATNPRPRNVAPVVVTSYCSEEASDDMETLERVLLAEDGSFVEVSPGVASSPVGGLEWLWKPEVNPHRSRVPRRTECGVEGRALFENHSWQALR 320
BLAST of mRNA_L-elsbetiae_contig1874.5483.1 vs. uniprot
Match: D7FNZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNZ1_ECTSI) HSP 1 Score: 229 bits (584), Expect = 1.060e-70 Identity = 129/262 (49.24%), Postives = 148/262 (56.49%), Query Frame = 1 Query: 193 VFAELFQRLGRDEHVRDLDLLFCGPNIALRLHDTLHSFSCSHPPAERGQHVSTTPISHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTLVVKLRYNSGLYHDVSELFPAPNALFLFNAGLWGYDDWEPTLEHVLDCGCKSSACRETGDVINRP-----------------PVVVTSYCPEEASDDMETIQRVVV------LEGDERCKCLVVSGLEWLWKPEVNPHRSLVPRQTRCGVEGRVLFENQSWQALR 909 +F +LFQRLG DEHV+DLD +FCGPNI LH T H+ H PA + + + G L V+L YNSGLYHDVS LF P+ALFLFNAGLWGYDDWEPTLEH+L GC +AC + V NR PVVVTSYC EEASDDMET++RV++ +E V GLEWLWKPEVNPHRS VPR+T CGVEGR LFEN SWQALR Sbjct: 1 MFVDLFQRLGHDEHVQDLDFVFCGPNIPPHLHGTRHTLVHHHAPAAATKDQTICGLD------------GVWQESPAATPGMMTTRCCDSPPSTAGALTVRLWYNSGLYHDVSGLFATPDALFLFNAGLWGYDDWEPTLEHIL--GCDRAAC-PSDHVGNRQASPPPIPATKSGPRNAVPVVVTSYCSEEASDDMETLERVLLGEDGNFVELSPGVASSPVGGLEWLWKPEVNPHRSRVPRRTECGVEGRALFENHSWQALR 247
BLAST of mRNA_L-elsbetiae_contig1874.5483.1 vs. uniprot
Match: A0A835YGP4_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGP4_9STRA) HSP 1 Score: 124 bits (312), Expect = 4.900e-28 Identity = 133/306 (43.46%), Postives = 163/306 (53.27%), Query Frame = 1 Query: 64 TRSFTIFHALVR----LFGTGNLPSSLVLHVLGADHREGTTPEETRSVFAELFQRLGRDEHVRDLDLLFCGPNIALRLHDTLHSFSCSHPPAERGQHVSTTPISHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------GTLVVKLRYNSGLYHDV----SELFPAPNALFLFNAGLWGYDDWEPTLEHVLDCGCKSSACRETGDVINRPP---VVVTSYCPEEASDDMETIQRVV-VLEGDERCKCLVVSGLEWLWKPEVNPHRSLVPRQTRCGVEGRVLFENQSWQAL 906 +RS T A++R L G +P LV+HV+GAD EGT+P ET +F LF+ L +DL+ GPN+ L + + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + V++RY GLY +V SE P+ LFNAGLWGYD W PTL +L + C D +P VVVTSYC EA+DD++ I+ V+ V EGD VS WLW PE+NPHRSLV R R V +EN WQ L Sbjct: 427 SRSATALGAILRAQQLLSGKRAMPQHLVVHVVGADLNEGTSPPETLRLFGGLFEGLASRAACASVDLVLVGPNVPHGLDGVASARTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAECGACVAVRVRYACGLYDEVVGALSEAVRDPHVALLFNAGLWGYDTWRPTLARLLCAPNEIPCCGLDADA--QPALRIVVVTSYCASEATDDLDVIEDVLGVEEGD-------VS--RWLWLPELNPHRSLVARDRRGHVTRHEQYENHHWQCL 721
BLAST of mRNA_L-elsbetiae_contig1874.5483.1 vs. uniprot
Match: A0A485KGC5_9STRA (Aste57867_5070 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGC5_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.830e-21 Identity = 92/320 (28.75%), Postives = 127/320 (39.69%), Query Frame = 1 Query: 37 VGGDESLRMTRSFTIFHALVRLF----------------GTGNLPSSLVLHVLGADHREGTTPEETRSVFAELFQRL---------GR---DEHVRDLDLLFCGPNIALRLHDTLHSFSCSHPPAERGQHVSTTPISHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTLVVKLRYNSGLYHD--VSELFPAPNALFLFNAGLWGYDDWEPTLEHVLDCGCKSSACRETGDVINRPPVVVTSYCPEEASDDMETIQRVVVLEGDERCKCLVVSGLEWLWKPEVNPHRSLVPRQTRCGVEGRVLFENQSWQAL 906 V D S +RSFTI HAL RL + P LVLH++GAD REG ET F +L G+ D +L L+ GPN+A +LH ER S++ S G V+L Y + L+ + + +P+A+F FNAG+WGYD+W PT +H++ C+ +A P++VTSY EA DD + I +EG W W+ E NP SL PR ++ + RVL EN WQ Sbjct: 7 VASDASNVNSRSFTILHALERLDLLHAKNHALKRKHKLPDEVDPPVRLVLHIVGADFREGNDVAETLRAFDQLITAFHTAPPPTAKGKPTPDHGYDELVLVMIGPNVARKLHGV----------EERVVFPSSSSSS--------------------------------------GGKSVRLLYATELWEEYLAGPRYLSPSAVFCFNAGVWGYDEWLPTFQHMM---CEDAAL----------PILVTSYNEFEAVDDADAIDD---MEGP----------WVWRWQQEPNPFASLTPRSSQNTIANRVLHENAYWQCF 252
BLAST of mRNA_L-elsbetiae_contig1874.5483.1 vs. uniprot
Match: A0A1V9ZX77_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZX77_9STRA) HSP 1 Score: 100 bits (249), Expect = 6.120e-21 Identity = 76/270 (28.15%), Postives = 111/270 (41.11%), Query Frame = 1 Query: 124 SSLVLHVLGADHREGTTPEETRSVFAELFQRLGRDEHVRDLD-------LLFCGPNIALRLHDTLHSFSCSHPPAERGQHVSTTPISHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTLVVKLRYNSGLYHD--VSELFPAPNALFLFNAGLWGYDDWEPTLEHVLDCGCKSSACRETGDVINRPPVVVTSYCPEEASDDMETIQRVVVLEGDERCKCLVVSGLEWLWKPEVNPHRSLVPRQTRCGVEGRVLFENQSWQAL 906 S LVLH++GAD+REG + ET VF +L G HV LD L+ GPN+ RLH T+H T+PI G V+L Y S ++ + + P+A+F FNAG+WGYD+W P + ++ + I+ P +++TSY EASDD + ++ + + W WK E NP L R ++ + RVL EN WQ + Sbjct: 92 SKLVLHIVGADYREGNSAAETLRVFEQLIAAFG---HVEQLDHGYTELVLVLVGPNVEQRLHGTVH----------------TSPIEGTGKS-------------------------------------VRLIYGSEIWSSYLAGQNYMVPSAIFCFNAGVWGYDEWIPAFQLMMQ------------EAIHTP-IIITSYNALEASDDADCLEDIEI-------------PFVWRWKHEPNPFLCLKQRASQHTLADRVLKENSCWQCI 279
BLAST of mRNA_L-elsbetiae_contig1874.5483.1 vs. uniprot
Match: A0A662YGW6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGW6_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 9.440e-21 Identity = 84/300 (28.00%), Postives = 116/300 (38.67%), Query Frame = 1 Query: 37 VGGDESLRMTRSFTIFHALVRLF----GTGNLP---SSLVLHVLGADHREGTTPEETRSVFAELFQRLGRDEHVRDLDLLFCGPNIALRLHDTLHSFSCSHPPAERGQHVSTTPISHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTLVVKLRYNSGLYHDV---SELFPAPNALFLFNAGLWGYDDWEPTLEHVLDCGCKSSACRETGDVINRPPVVVTSYCPEEASDDMETIQRVVVLEGDERCKCLVVSGLEWLWKPEVNPHRSLVPRQTRCGVEGRVLFENQSWQAL 906 G S R TR+ T+ L RL T + ++L +H+LGADHREG TP ET VF + L D L+L+ GPN+A LH HS C T ++L Y G + + L+ AP+ + FNAG+WGYD+W PT+ VL +E + P++VTSY EA DD + + + + WLW+ E NP + PR T G VL EN W + Sbjct: 3 TAGVTSARETRAATLVAWLERLHDYDVATADATEHKTTLTVHLLGADHREGNTPSETVEVFRSFSRYLAVDPRFSTLELVLVGPNLARTLHLQKHSQLCD---------------------------------------------------AAGKTCQMELSYFVGGFEEYFADKALYLAPDLVACFNAGIWGYDEWLPTIRLVL---------KEV-----QAPLLVTSYNENEAGDDEDVLDDL--------------APARWLWRAEKNPSGARTPRATN-NPAGEVLKENDYWMCV 222
BLAST of mRNA_L-elsbetiae_contig1874.5483.1 vs. uniprot
Match: A0A1V9ZMY5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMY5_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.000e-20 Identity = 77/265 (29.06%), Postives = 108/265 (40.75%), Query Frame = 1 Query: 130 LVLHVLGADHREGTTPEETRSVFAEL---FQRLGRDEHVRD-LDLLFCGPNIALRLHDTLHSFSCSHPPAERGQHVSTTPISHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTLVVKLRYNSGLYHD--VSELFPAPNALFLFNAGLWGYDDWEPTLEHVLDCGCKSSACRETGDVINRPPVVVTSYCPEEASDDMETIQRVVVLEGDERCKCLVVSGLEWLWKPEVNPHRSLVPRQTRCGVEGRVLFENQSWQAL 906 LVLH++GAD REG +ET + FA+L F G +H D L L+ GPNI RLH T T IS G +++ Y S ++ D L+ +P A+F FNAG+WGYD+W P +H++ RE P+++TSY EA DD + ++ + + W WK E N L R T+ + RVL EN SWQ + Sbjct: 70 LVLHIVGADQREGRNVQETMAAFAQLITAFGNAGNHDHGYDELVLVLIGPNIETRLHST----------------SQTESISSSGKS-------------------------------------IRVVYASEVWSDHVAGSLYESPTAIFCFNAGVWGYDEWIPAFQHMM---------REE----IHTPIIITSYNELEAIDDADCLEDIE-------------TPFVWRWKHEPNAFLCLKRRATQHTLADRVLNENSSWQCI 255
BLAST of mRNA_L-elsbetiae_contig1874.5483.1 vs. uniprot
Match: A0A8K1FAU4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FAU4_PYTOL) HSP 1 Score: 97.1 bits (240), Expect = 6.960e-20 Identity = 74/264 (28.03%), Postives = 108/264 (40.91%), Query Frame = 1 Query: 127 SLVLHVLGADHREGTTPEETRSVFAELFQRLGRDEHVRD-LDLLFCGPNIALRLHDTLHSFSCSHPPAERGQHVSTTPISHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTLVVKLRYNSGLYHDV---SELFPAPNALFLFNAGLWGYDDWEPTLEHVLDCGCKSSACRETGDVINRPPVVVTSYCPEEASDDMETIQRVVVLEGDERCKCLVVSGLEWLWKPEVNPHRSLVPRQTRCGVEGRVLFENQSWQAL 906 +L +H++GADHREG T ET +F + FQ L D+ + L L+ GPNIA +LH+ H + H+ TT + ++L Y G + D ++ + P+ FNAG+WGYD W PTL ++ + P+++TSY EASDD + VL+ V+ W W+ E NP SL R TR G +L EN W + Sbjct: 53 TLTIHLVGADHREGNTVAETLGIFDQFFQYLAVDDRCYETLQLVLVGPNIAHKLHNDSHEST----------HIDTTATLEA--------------------------------KATAAAIQIELSYYVGSFDDYYGETDQYVRPDLAVCFNAGIWGYDQWLPTLRLLVHQ--------------IQTPLLITSYNENEASDDED------VLDDS-------VAPPRWFWRAEKNPFGSLTHRSTR-NEYGSILRENDFWMCV 246
BLAST of mRNA_L-elsbetiae_contig1874.5483.1 vs. uniprot
Match: K3WG78_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WG78_GLOUD) HSP 1 Score: 95.9 bits (237), Expect = 1.880e-19 Identity = 73/264 (27.65%), Postives = 106/264 (40.15%), Query Frame = 1 Query: 124 SSLVLHVLGADHREGTTPEETRSVFAELFQRLGRDEHVRDLDLLFCGPNIALRLHDTLHSFSCSHPPAERGQHVSTTPISHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTLVVKLRYNSGLYHDV---SELFPAPNALFLFNAGLWGYDDWEPTLEHVLDCGCKSSACRETGDVINRPPVVVTSYCPEEASDDMETIQRVVVLEGDERCKCLVVSGLEWLWKPEVNPHRSLVPRQTRCGVEGRVLFENQSWQAL 906 S L +H++GADHREG T ET +F F+ L + L L+ GPNIA LH + S+S A G++++ + T +++ Y G + D L+ P+ FNAG+WGYD+W P+L +L + P++VTSY EA DD + + ++ +W W+ E NPH SL R T G VL EN W L Sbjct: 53 SVLTIHLVGADHREGNTGAETCVIFDTFFRALAEEGRFATLQLVLVGPNIARLLHQS--SYSRPWTSALEGENMNIVAAN----------------------------------AAEPSTCQIEISYFVGSFDDYFLDKALYLPPDLAVCFNAGIWGYDEWLPSLRLLLHT--------------IKTPLLVTSYNENEAMDDEDVLD--------------TLAPPQWFWRAEKNPHGSLRHRATNNNF-GSVLKENDYWMCL 251
BLAST of mRNA_L-elsbetiae_contig1874.5483.1 vs. uniprot
Match: W4H9R8_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9R8_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 3.190e-18 Identity = 85/302 (28.15%), Postives = 116/302 (38.41%), Query Frame = 1 Query: 64 TRSFTIFHALVRLFGTGNLPS----------------SLVLHVLGADHREGTTPEETRSVFAEL---FQRLGRDEHVRDLDLLFCGPNIALRLHDTLHSFSCSHPPAERGQHVSTTPISHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTLVVKLRYNSGLYHDV--SELFPAPNALFLFNAGLWGYDDWEPTLEHVLDCGCKSSACRETGDVINRPPVVVTSYCPEEASDDMETIQRVVVLEGDERCKCLVVSGLEWLWKPEVNPHRSLVPRQTRCGVEGRVLFENQSWQAL 906 +RSFT+ AL RL P LVLH++GAD REG ET +F +L FQ G+ +L L+F GPN+A +LH + +HVS + +G V+++Y + L+ + S + +P LF FNAG+WGYD+W PT + ++ P+VVTSY EA DD + I V V + W W E NP S R R RVL EN WQ Sbjct: 33 SRSFTVLKALERLHLLHPTPPLHKHKHKLPDHVDPHVQLVLHIVGADFREGNEVSETLRIFDQLVAAFQSQGQTNTWDELVLVFIGPNVARKLHG-------------KNEHVS---LLNGKS--------------------------------------VRVQYVAELWDEYLRSRAYISPAVLFCFNAGVWGYDEWLPTFQRMVQ-------------EAPHAPIVVTSYNECEAIDDSDAIADVEV-------------PISWQWTMEANPFAS---RSARPSHHDRVLHENAYWQCF 251 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1874.5483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1874.5483.1 >prot_L-elsbetiae_contig1874.5483.1 ID=prot_L-elsbetiae_contig1874.5483.1|Name=mRNA_L-elsbetiae_contig1874.5483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=314bp MSEEGVGGDESLRMTRSFTIFHALVRLFGTGNLPSSLVLHVLGADHREGTback to top mRNA from alignment at L-elsbetiae_contig1874:19775..21360+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1874.5483.1 ID=mRNA_L-elsbetiae_contig1874.5483.1|Name=mRNA_L-elsbetiae_contig1874.5483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1586bp|location=Sequence derived from alignment at L-elsbetiae_contig1874:19775..21360+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1874:19775..21360+ >mRNA_L-elsbetiae_contig1874.5483.1 ID=mRNA_L-elsbetiae_contig1874.5483.1|Name=mRNA_L-elsbetiae_contig1874.5483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1884bp|location=Sequence derived from alignment at L-elsbetiae_contig1874:19775..21360+ (Laminarionema elsbetiae ELsaHSoW15)back to top |