mRNA_L-elsbetiae_contig18554.5401.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18554.5401.1 vs. uniprot
Match: D8LP21_ECTSI (Methyl transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP21_ECTSI) HSP 1 Score: 189 bits (479), Expect = 1.530e-58 Identity = 89/121 (73.55%), Postives = 101/121 (83.47%), Query Frame = 1 Query: 4 VFSQVDLEIVEHPSPLPREAYGAALVFNYLHRPLIPNVRDSIKPGGLVLYKTFTWEHPSVGVRPSNPAFLLGPGELRDELFPGWEVLHFFEGVEVVEDGVVEDKATSTRRAAVSSIVCRKP 366 V + DLE E+PSPLPRE +GA LVFNYLHRPL+ N+RDS+KPGGLVLYKTFTW+HPSVGVRPSNPAFLLGPGEL+DE+F GWEV+ FFEGV VVE G + + RR AVSSIVCRKP Sbjct: 76 VHQETDLETEENPSPLPRETFGAVLVFNYLHRPLVANLRDSVKPGGLVLYKTFTWQHPSVGVRPSNPAFLLGPGELKDEMFAGWEVIDFFEGVVVVE-GNASAEGSGVRRVAVSSIVCRKP 195
BLAST of mRNA_L-elsbetiae_contig18554.5401.1 vs. uniprot
Match: A0A6H5JPT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT9_9PHAE) HSP 1 Score: 188 bits (478), Expect = 3.550e-58 Identity = 89/121 (73.55%), Postives = 101/121 (83.47%), Query Frame = 1 Query: 4 VFSQVDLEIVEHPSPLPREAYGAALVFNYLHRPLIPNVRDSIKPGGLVLYKTFTWEHPSVGVRPSNPAFLLGPGELRDELFPGWEVLHFFEGVEVVEDGVVEDKATSTRRAAVSSIVCRKP 366 + +Q DLE E+PSPLP EA+GA LVFNYLHRPL+ N+RDS++PGGLVLYKTFTW+HPSVGVRPSNPAFLLGPGEL+DE+F GWEV+ FFEGV VVE G RRAAVSSIVCRKP Sbjct: 94 LLAQTDLETEENPSPLPEEAFGAVLVFNYLHRPLVANLRDSVQPGGLVLYKTFTWQHPSVGVRPSNPAFLLGPGELKDEMFAGWEVIDFFEGVVVVE-GTASADGGGVRRAAVSSIVCRKP 213
BLAST of mRNA_L-elsbetiae_contig18554.5401.1 vs. uniprot
Match: A0A7X7SNU5_9ACTN (Methyltransferase domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X7SNU5_9ACTN) HSP 1 Score: 103 bits (258), Expect = 1.320e-25 Identity = 59/122 (48.36%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 1 AVFSQVDLEIVEHPSPLPREAYGAALVFNYLHRPLIPNVRDSIKPGGLVLYKTFTWEHPSVGVRPSNPAFLLGPGELRDELFPGWEVLHFFEGVEVVEDGVVEDKATSTRRAAVSSIVCRKP 366 A F +VDLE +PL +E Y LVF YLHRPL+P++R+ ++ GG+++Y+TFT E P G +P NPA+LL PGEL F WE+LH FEG+ +ED R AV+ IVCRKP Sbjct: 68 ARFWEVDLET--DANPLRQEYYRGILVFRYLHRPLMPHIREGVRKGGVLIYETFTTEQPRYG-KPRNPAYLLEPGELTG-WFADWEILHCFEGL-------LEDP-----RRAVAQIVCRKP 173
BLAST of mRNA_L-elsbetiae_contig18554.5401.1 vs. uniprot
Match: A0A3A5AQG0_9DELT (Class I SAM-dependent methyltransferase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A5AQG0_9DELT) HSP 1 Score: 103 bits (258), Expect = 1.350e-25 Identity = 57/120 (47.50%), Postives = 77/120 (64.17%), Query Frame = 1 Query: 7 FSQVDLEIVEHPSPLPREAYGAALVFNYLHRPLIPNVRDSIKPGGLVLYKTFTWEHPSVGVRPSNPAFLLGPGELRDELFPGWEVLHFFEGVEVVEDGVVEDKATSTRRAAVSSIVCRKP 366 + QVDLE E +PL ++YG LVF YLHRPLIP+VR+++ PGG++LY+T+T E G +P NP FLL PGEL + LF W+V+H+ EG+ D AV+ IVC+KP Sbjct: 71 YWQVDLE-QEEENPLQGKSYGGILVFRYLHRPLIPSVREALAPGGVLLYETYTLEQARFG-KPRNPDFLLKPGEL-ERLFGDWDVIHYHEGIYKNPD------------RAVAGIVCKKP 175
BLAST of mRNA_L-elsbetiae_contig18554.5401.1 vs. uniprot
Match: A0A2K2VVX4_9DELT (TehB domain-containing protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2K2VVX4_9DELT) HSP 1 Score: 102 bits (255), Expect = 3.730e-25 Identity = 59/118 (50.00%), Postives = 75/118 (63.56%), Query Frame = 1 Query: 13 QVDLEIVEHPSPLPREAYGAALVFNYLHRPLIPNVRDSIKPGGLVLYKTFTWEHPSVGVRPSNPAFLLGPGELRDELFPGWEVLHFFEGVEVVEDGVVEDKATSTRRAAVSSIVCRKP 366 QVDLE E +PLP AYGA LVF YLHRPLIP ++ +++ GGL+LY+TFT E P G +P NP +LL GEL +F WE + +FEG+ K TR AV+ I+CRKP Sbjct: 72 QVDLE-PEGVNPLPEHAYGAILVFRYLHRPLIPCIKKALRKGGLLLYETFTAEQPRFG-KPRNPDYLLQSGELG-HMFADWEEIFYFEGI----------KENPTR--AVAQIICRKP 174
BLAST of mRNA_L-elsbetiae_contig18554.5401.1 vs. uniprot
Match: A0A7V0QL57_9DELT (Class I SAM-dependent methyltransferase n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V0QL57_9DELT) HSP 1 Score: 102 bits (255), Expect = 6.030e-25 Identity = 59/119 (49.58%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 7 FSQVDLEIVEHPSPLPREAYGAALVFNYLHRPLIPNVRDSIKPGGLVLYKTFTWEHPSVGVRPSNPAFLLGPGELRDELFPGWEVLHFFEGVEVVEDGVVEDKATSTRRAAVSSIVCRK 363 F Q DLEI + SPLP+E +G LVF YL+R L P +R ++KPGGL++Y+TFT + P G +P NP+FLL PGELR +F W VLH+ EG+ V+D D+A V+ IVC+K Sbjct: 90 FWQKDLEIGDE-SPLPQEHFGVILVFRYLYRRLFPEIRAALKPGGLLIYETFTTQQPQFG-KPKNPSFLLRPGELR-MVFGDWRVLHYIEGI--VKD---PDRA-------VAQIVCKK 193
BLAST of mRNA_L-elsbetiae_contig18554.5401.1 vs. uniprot
Match: UPI0019D93D20 (Class I SAM-dependent methyltransferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019D93D20) HSP 1 Score: 101 bits (252), Expect = 2.010e-24 Identity = 59/118 (50.00%), Postives = 77/118 (65.25%), Query Frame = 1 Query: 13 QVDLEIVEHPSPLPREAYGAALVFNYLHRPLIPNVRDSIKPGGLVLYKTFTWEHPSVGVRPSNPAFLLGPGELRDELFPGWEVLHFFEGVEVVEDGVVEDKATSTRRAAVSSIVCRKP 366 QVDLE+ +P +G LV+NYLHRPL+ N++ ++ PGGLV Y+TFT E G RPSNP FLL PGELRD F W+VLH FEGV VE+++ S RA ++ +V +KP Sbjct: 79 QVDLELTG-VNPFDDRLFGGILVYNYLHRPLMQNLKRAVLPGGLVFYETFTTEQVKFG-RPSNPDFLLRPGELRD-CFKQWQVLHDFEGV-------VENESGSGARA-IAQLVAKKP 185
BLAST of mRNA_L-elsbetiae_contig18554.5401.1 vs. uniprot
Match: A0LGR6_SYNFM (Methyltransferase type 12 n=2 Tax=Syntrophobacter TaxID=29526 RepID=A0LGR6_SYNFM) HSP 1 Score: 100 bits (248), Expect = 3.520e-24 Identity = 56/118 (47.46%), Postives = 76/118 (64.41%), Query Frame = 1 Query: 13 QVDLEIVEHPSPLPREAYGAALVFNYLHRPLIPNVRDSIKPGGLVLYKTFTWEHPSVGVRPSNPAFLLGPGELRDELFPGWEVLHFFEGVEVVEDGVVEDKATSTRRAAVSSIVCRKP 366 Q DLE V +PLP EA+GA +VF YLHRPL P +R +++ GG+++Y+TFT +H G +P NP LL PGELR ++F WE +H+FEG +K R AV+ IVCR+P Sbjct: 59 QEDLE-VPGVNPLPVEAFGAIVVFRYLHRPLFPAIRKALRQGGILVYETFTADHAKFG-KPRNPDHLLQPGELR-KVFEDWETIHWFEG----------EKTDPLR--AVAQIVCRRP 161
BLAST of mRNA_L-elsbetiae_contig18554.5401.1 vs. uniprot
Match: A0A2T5CFF8_9DELT (Methyltransf_25 domain-containing protein n=2 Tax=Desulfonatronum TaxID=66848 RepID=A0A2T5CFF8_9DELT) HSP 1 Score: 99.8 bits (247), Expect = 7.110e-24 Identity = 58/117 (49.57%), Postives = 71/117 (60.68%), Query Frame = 1 Query: 19 DLEIVEHPSPLPREAYGAALVFNYLHRPLIPNVRDSIKPGGLVLYKTFTWEHPSVGVRPSNPAFLLGPGELRDELFPGWEVLHFFEGVEVVEDGVVEDKATSTRRAAVSSIVCRKPS 369 DLE + +PLP +GA LVF YLHRPLIP +R +++PGG V+Y+TFT + P G P NP LL PGEL +E F WEVLH FEGV D A++ IV RKPS Sbjct: 80 DLEAADR-APLPENTFGAVLVFRYLHRPLIPEIRRAVRPGGYVIYETFTVDQPKFGP-PRNPDHLLKPGEL-EEWFRDWEVLHRFEGVLNDPD------------RAMARIVARKPS 181
BLAST of mRNA_L-elsbetiae_contig18554.5401.1 vs. uniprot
Match: A0A2A4MNQ8_9GAMM (MTS domain-containing protein n=1 Tax=SAR86 cluster bacterium TaxID=2030880 RepID=A0A2A4MNQ8_9GAMM) HSP 1 Score: 100 bits (248), Expect = 7.810e-24 Identity = 57/127 (44.88%), Postives = 79/127 (62.20%), Query Frame = 1 Query: 1 AVFSQVDLEIV-----EHPSPLPREAYGAALVFNYLHRPLIPNVRDSIKPGGLVLYKTFTWEHPSVGVRPSNPAFLLGPGELRDELFPGWEVLHFFEGVEVVEDGVVEDKATSTRRAAVSSIVCRKP 366 A F Q+DLE PL + LVFNYLHRP++P +++++KPGGL+LY+TFT+ ++G RPSN FLL PGELR ELF W++L++FEG + TS +RA + +V RKP Sbjct: 87 AQFCQLDLEAGFLTDGVAAKPLGGRVFDTVLVFNYLHRPIMPWLKETVKPGGLILYETFTYAQAAIG-RPSNRGFLLAPGELR-ELFDNWQILYYFEG-----------EFTSPKRAK-ACLVARKP 199 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18554.5401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18554.5401.1 >prot_L-elsbetiae_contig18554.5401.1 ID=prot_L-elsbetiae_contig18554.5401.1|Name=mRNA_L-elsbetiae_contig18554.5401.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=127bp AVFSQVDLEIVEHPSPLPREAYGAALVFNYLHRPLIPNVRDSIKPGGLVLback to top mRNA from alignment at L-elsbetiae_contig18554:2297..2677- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18554.5401.1 ID=mRNA_L-elsbetiae_contig18554.5401.1|Name=mRNA_L-elsbetiae_contig18554.5401.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=381bp|location=Sequence derived from alignment at L-elsbetiae_contig18554:2297..2677- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18554:2297..2677- >mRNA_L-elsbetiae_contig18554.5401.1 ID=mRNA_L-elsbetiae_contig18554.5401.1|Name=mRNA_L-elsbetiae_contig18554.5401.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=762bp|location=Sequence derived from alignment at L-elsbetiae_contig18554:2297..2677- (Laminarionema elsbetiae ELsaHSoW15)back to top |