Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 390 |
Cds size | 309 |
Stop | 0 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815767.8276935-UTR-L-elsbetiae_contig1841:14565..14645 | 1622815767.8276935-UTR-L-elsbetiae_contig1841:14565..14645 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1841 14566..14645 + |
1691683089.4350932-UTR-L-elsbetiae_contig1841:14565..14645 | 1691683089.4350932-UTR-L-elsbetiae_contig1841:14565..14645 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1841 14566..14645 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815767.8431485-CDS-L-elsbetiae_contig1841:14645..14954 | 1622815767.8431485-CDS-L-elsbetiae_contig1841:14645..14954 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1841 14646..14954 + |
1691683089.446143-CDS-L-elsbetiae_contig1841:14645..14954 | 1691683089.446143-CDS-L-elsbetiae_contig1841:14645..14954 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1841 14646..14954 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1841.5344.1 >prot_L-elsbetiae_contig1841.5344.1 ID=prot_L-elsbetiae_contig1841.5344.1|Name=mRNA_L-elsbetiae_contig1841.5344.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=103bp
MRCAEPRFLQVGMQCEIHAHRCYTPLLHLKSPGCSHATPPKYLPTPFCRT DRAVQIYFWLSSLSRLAPCPEDHVCTAEPSASISQHVSGEHVSLSPKPWG WRI back to topmRNA from alignment at L-elsbetiae_contig1841:14566..14954+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1841.5344.1 ID=mRNA_L-elsbetiae_contig1841.5344.1|Name=mRNA_L-elsbetiae_contig1841.5344.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=389bp|location=Sequence derived from alignment at L-elsbetiae_contig1841:14566..14954+ (Laminarionema elsbetiae ELsaHSoW15) CTTAAGCCGGCGTGCAACACTGTAGACTAGCTCAAAAGTGTTGACGTATA
CTATTGTAGTGCGTACATGTATACGTGTCGATGCGTTGTGCCGAACCCCG
ATTCTTACAAGTTGGGATGCAATGTGAGATACACGCACATAGATGCTACA
CGCCCCTTCTGCATCTGAAATCACCTGGTTGCTCCCACGCGACTCCTCCA
AAGTATCTTCCTACACCCTTTTGTCGCACTGACCGCGCCGTACAAATTTA
CTTCTGGCTCTCCAGCTTGTCTAGACTGGCCCCTTGTCCTGAAGACCATG
TCTGTACCGCCGAGCCATCGGCATCTATCTCACAACACGTATCAGGCGAA
CACGTGTCGTTGTCTCCTAAACCCTGGGGATGGAGGATC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1841:14566..14954+ >mRNA_L-elsbetiae_contig1841.5344.1 ID=mRNA_L-elsbetiae_contig1841.5344.1|Name=mRNA_L-elsbetiae_contig1841.5344.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=618bp|location=Sequence derived from alignment at L-elsbetiae_contig1841:14566..14954+ (Laminarionema elsbetiae ELsaHSoW15) ATGCGTTGTGCCGAACCCCGATTCTTACAAGTTGGGATGCAATGTGAGAT ACACGCACATAGATGCTACACGCCCCTTCTGCATCTGAAATCACCTGGTT GCTCCCACGCGACTCCTCCAAAGTATCTTCCTACACCCTTTTGTCGCACT GACCGCGCCGTACAAATTTACTTCTGGCTCTCCAGCTTGTCTAGACTGGC CCCTTGTCCTGAAGACCATGTCTGTACCGCCGAGCCATCGGCATCTATCT CACAACACGTATCAGGCGAACACGTGTCGTTGTCTCCTAAACCCTGGGGA TGGAGGATCATGCGTTGTGCCGAACCCCGATTCTTACAAGTTGGGATGCA ATGTGAGATACACGCACATAGATGCTACACGCCCCTTCTGCATCTGAAAT CACCTGGTTGCTCCCACGCGACTCCTCCAAAGTATCTTCCTACACCCTTT TGTCGCACTGACCGCGCCGTACAAATTTACTTCTGGCTCTCCAGCTTGTC TAGACTGGCCCCTTGTCCTGAAGACCATGTCTGTACCGCCGAGCCATCGG CATCTATCTCACAACACGTATCAGGCGAACACGTGTCGTTGTCTCCTAAA CCCTGGGGATGGAGGATC back to top
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