mRNA_L-elsbetiae_contig1804.5174.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1804.5174.1 vs. uniprot
Match: D7G0S7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0S7_ECTSI) HSP 1 Score: 372 bits (955), Expect = 3.390e-125 Identity = 179/215 (83.26%), Postives = 195/215 (90.70%), Query Frame = 3 Query: 3 VSRYGEDKGKDPWDDGCWAHDIGTVEAVRTARRGSLLIATEEIDGGTFHQSVILILSHGRDQGTLGLILNRPGPQRLHSLPGLQADLAEVFGESQVFDGGPMGLGTMTVLHGANVEGSDPIMNG-VYAGGFESLVEATRQGRVPKDRVRFVHGHSAWSPGQLQGELDHNQWFVAAAAPELITELCDQPFNPLWGKLLRLMGGKYREVAQRNEPRM 644 ++RYGED GKDPW DGCWAHDIGTVEA G LLIATEEID GTFHQSVIL+LSH RDQGTLGLILNRPGPQRL SLPGLQ DLAEVFG+SQVFDGGPMGLGTMTVLH ANVEGSDP+++G V+AGGF++LV+ TRQG V KDRVRFVHGHSAWSPGQLQGELDHNQWFVAAAAPELITE CD+PF+PLW KLLRLMGGKY+EVA+RNEPR+ Sbjct: 103 ITRYGEDIGKDPWSDGCWAHDIGTVEA------GCLLIATEEIDSGTFHQSVILVLSHARDQGTLGLILNRPGPQRLRSLPGLQPDLAEVFGDSQVFDGGPMGLGTMTVLHDANVEGSDPVLDGGVFAGGFDTLVDVTRQGTVSKDRVRFVHGHSAWSPGQLQGELDHNQWFVAAAAPELITEHCDKPFHPLWTKLLRLMGGKYQEVAKRNEPRL 311
BLAST of mRNA_L-elsbetiae_contig1804.5174.1 vs. uniprot
Match: A0A836CNM8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNM8_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.670e-50 Identity = 95/201 (47.26%), Postives = 122/201 (60.70%), Query Frame = 3 Query: 39 WDDGCWAHDIGTVEAVRTARRGSLLIATEEIDGGTFHQSVILILSHGRDQGTLGLILNRPGPQRLHSLPGLQADLAEVFGESQVFDGGPMGLGTMTVLHGAN-VEGSDPIMNGVYAGGFESLVEATRQGRVPKDRVRFVHGHSAWSPGQLQGELDHNQWFVAAAAPELITELCDQPFNP--LWGKLLRLMGGKYREVAQRN 632 W D WAH+IG VE +G +L+A E + G FHQ+ +L+L H + GTLGLILNRP +R+ +PGL D+ FG+ V GGP+G G MT LHG G I G+Y GGFE LV ++GRV +R HGH+AW PGQL EL + W++AAAAP L+T P +W +LL LMGG Y EVA+RN Sbjct: 86 WRDDAWAHEIGVVE------KGCVLLAHETLQG-VFHQTAVLVLDHDDNAGTLGLILNRPTKRRIAGVPGLGRDMQAAFGQCAVHYGGPVGAGGMTALHGVKQARGGQEIAPGLYVGGFEDLVRLAQEGRVDGSSLRLAHGHAAWGPGQLSRELRADFWYLAAAAPALVTGAGAAGRAPSRMWHQLLDLMGGSYAEVARRN 279
BLAST of mRNA_L-elsbetiae_contig1804.5174.1 vs. uniprot
Match: A0A7S2Y026_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y026_9STRA) HSP 1 Score: 169 bits (428), Expect = 2.590e-46 Identity = 87/211 (41.23%), Postives = 129/211 (61.14%), Query Frame = 3 Query: 3 VSRYGEDKGKDPWDDGCWAHDIGTVEAVRTARRGSLLIATEEIDGGTFHQSVILILSHGRDQGTLGLILNRPGPQRLHSLPGLQADLAEVFGESQVFDGGPMGLGTMTVLHGAN-VEGSDPIMNGVYAGGFESLVEATRQGRVPKDRVRFVHGHSAWSPGQLQGELDHNQWFVAAAAPELITELCDQPFNPLWGKLLRLMGGKYREVAQRN 632 V++Y K ++ W + WAHDIG +E G LL+A++ +D TF QSVIL+L+H D GT G++LNRP + ++ + L E FGE+ ++ GGPMGL + V+H VEG+ I G+Y GG L E QG++ +VRF GH+AW+PGQL+ E++ W+ A +PEL+ C PLW ++L LMGG+Y E+ ++N Sbjct: 79 VAQY-SGKERENWTEDRWAHDIGQIE------NGCLLLASDVMDDDTFWQSVILVLNHDPDNGTFGIVLNRPTGAHVCNVRDIVPALREAFGEAPLYLGGPMGLDEVNVVHAVEGVEGAIEIRKGLYHGGVAGLQERAEQGQLDLAKVRFEAGHAAWNPGQLEQEIEKGWWYPAVCSPELVVRPCIGLPVPLWCQILDLMGGEYAEIGKKN 282
BLAST of mRNA_L-elsbetiae_contig1804.5174.1 vs. uniprot
Match: A0A7S1BIP2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIP2_9STRA) HSP 1 Score: 127 bits (319), Expect = 4.670e-29 Identity = 76/210 (36.19%), Postives = 111/210 (52.86%), Query Frame = 3 Query: 54 WAHDIGTVEAVRTARRGSLLIATEEIDGGTFHQSVILILSHGRDQGTLGLILNRP---------GPQRLHSLPGLQADLAEVFGESQVFDGGPMGLGTMTVLHGANV-EGSDPIMNGVYAGGFESLVEATRQGRVPKDRVRFVHGHSAWSPGQLQGELDHNQWFVAAAAPELITELCDQPFNP-------LWGKLLRLMGGKYREVAQRN 632 WAH + VE +G LL+A+E++ GG FHQ+V+LI+SH + G++G+++NRP GP R ++P + F ES V GGP+ +LHG N+ EG+ + GV+ GG L R G R V GH+AW PGQLQ E+ W +AAA+ +LI +P LW ++L M G Y+++A N Sbjct: 255 WAHPLSHVE------KGCLLLASEKL-GGIFHQTVVLIISHNDNLGSMGVVINRPLGKKIKELSGPARKSTIPDA---MRSSFAESTVTYGGPVQTDHYAILHGYNLAEGAVELTKGVFVGGHTDLERDVRSGCFLPMRALLVKGHAAWVPGQLQREISKGVWHIAAASSDLILRYAGAKEDPETEFPDNLWSEILSAMDGDYKKIALAN 454
BLAST of mRNA_L-elsbetiae_contig1804.5174.1 vs. uniprot
Match: A0A835Z6U1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6U1_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.130e-28 Identity = 83/227 (36.56%), Postives = 108/227 (47.58%), Query Frame = 3 Query: 39 WDDGCWAHDIGTVEAVRTARRGSLLIATEEIDGGTFHQSVILILSHGRDQGTLGLILNRPGPQRLHSLPGLQADLAEVFGESQVFDGGPMGLGTMTVLHGAN-VEGSDPIMNGVYAGGFESLV----EAT--------------------------------RQGRVPKDRVRFVHGHSAWSPGQ---------------------LQGELDHNQWFVAAAAPELIT 545 W G WAHDIG VE +G +L+A E ++G F+Q+V+LIL H +GTLGLI+NRP +R+ +PGL D+ FG+ V GGP+G G MT LH A +G + VY GG E LV EAT ++G +R GH+AW PGQ L+ EL N W+VA+AAPELIT Sbjct: 90 WSGGKWAHDIGCVE------KGCVLLAHESLEG-VFYQTVVLILDHDDTRGTLGLIINRPTKKRIAGVPGLGRDVQRAFGDCPVLYGGPVGAGGMTALHSAGEAKGCQEVAPSVYVGGLEGLVRLAQEATPWSVVRRIAALLWRRLVNLGGKGRALRSGGVAQRGHAHGSTLRLAVGHAAWVPGQEKETASNTQAPAPLGAERLRHLKRELRANFWYVASAAPELIT 309
BLAST of mRNA_L-elsbetiae_contig1804.5174.1 vs. uniprot
Match: R7QN66_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN66_CHOCR) HSP 1 Score: 120 bits (300), Expect = 7.810e-28 Identity = 72/198 (36.36%), Postives = 114/198 (57.58%), Query Frame = 3 Query: 54 WAHDIGTVEAVRTARRGSLLIATEEIDGGT-----FHQSVILILSHGRDQGTLGLILNRPGPQRLHSLPGLQADLAEVFGESQVFDGGPMGLGTMTVLHG-ANVEGSDPIMNGVYAGGFESLVEATRQGRVPKDRVRFVHGHSAWSPGQLQGELDHNQWFVAAAAPELITELCDQPFNPLWGKLLRLMGGKYREVAQR 629 WAH++ VEA G LLIA+ E G F SV+L+L+H D+GT+G+ILNRP + S P L+ ++ + ++ GGP+ L ++ LH A++ G+ +++GV G ++ +G++ D RF G+S WSPGQLQ E+D W+ A+ EL+TE + L KLL+LMGG++ ++ +R Sbjct: 68 WAHEVPFVEA------GCLLIASPEHFVGEHSCSFFANSVVLVLTHHSDKGTVGVILNRPVAAAV-SEPRLRGAVSAA--PAPLYLGGPVALDSLLALHNDASIPGAGQVVDGVATSGVAEVLSRIERGQMNVDSCRFFCGYSGWSPGQLQEEVDSGVWYTCASCTELVTEKGLHRDDYLTKKLLKLMGGRFTQIGER 256
BLAST of mRNA_L-elsbetiae_contig1804.5174.1 vs. uniprot
Match: A0A1Y1HP74_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HP74_KLENI) HSP 1 Score: 117 bits (292), Expect = 4.270e-26 Identity = 68/198 (34.34%), Postives = 111/198 (56.06%), Query Frame = 3 Query: 48 GCWAHDIGTVEAVRTARRGSLLIATEEIDGGT---FHQSVILILSHGRDQGTLGLILNRPGPQRLHSLPGLQADLAEVFGESQVFDGGPMGLGTMTVLHG-ANVEGSDPIMNGVYAGGFESLVEATRQGRVPKDRVRFVHGHSAWSPGQLQGELDHNQWFVAAAAPELITELCDQPFNPLWGKLLRLMGGKYREVAQR 629 G WAH + E G+L+IA F+ +VIL+L HG ++G++G+ILN+P L +L L+ +++ GG +G G VLH ++++G+ ++ GVY GGFE++ E R G+ D R+ H ++ W PGQL+ E+ WF+ + + +L+ + PLW ++L+LMGG Y EVA+R Sbjct: 143 GSWAHPLVLPEV------GALVIAKPGYFNQNQQYFNHAVILLLHHG-EEGSMGIILNKPTEHTLGTLFEGIDTLSPELASGRLYLGGDVGHGATHVLHRHSDLDGTRKVVEGVYTGGFEAIGEHIRAGKSECDDYRWFHMYAGWGPGQLENEVKAGVWFLGSCSRDLLLTHSEDLKTPLWDEVLQLMGGTYAEVAKR 333
BLAST of mRNA_L-elsbetiae_contig1804.5174.1 vs. uniprot
Match: A0A315Z7A6_9BACT (Putative transcriptional regulator n=1 Tax=Sediminitomix flava TaxID=379075 RepID=A0A315Z7A6_9BACT) HSP 1 Score: 105 bits (262), Expect = 3.130e-23 Identity = 63/184 (34.24%), Postives = 105/184 (57.07%), Query Frame = 3 Query: 96 RRGSLLIATEEIDGGTFHQSVILILSHGRDQGTLGLILNRPGPQRLHSLPGLQADLAEVFGESQVFDGGPMGLGTMTVLHG-ANVEGSDPIMNGVYAGG-FESLVEATRQGRVPKDRVRFVHGHSAWSPGQLQGELDHNQWFVAAAAPELITELCDQPFNPLWGKLLRLMGGKYREVAQRNEPR 641 R+G +L+A + F ++V+L+ H ++G+ GL+LN+P ++ + +LA+ E ++F GGP+ T+ LH ++V+G+ + NGVY GG FE L G + D RF G+S WS QL+ EL++N W V+ P +I + + + LW +L+ MGGKY+ ++ N PR Sbjct: 14 RKGDILLAEPFMTDPNFERAVVLVCEHNEEEGSFGLVLNKPSVVQMEDI---SLNLAK---EHELFIGGPVEQDTLHYLHTMSDVKGAVKLRNGVYWGGEFEHLQFMAENGFLTTDNCRFFMGYSGWSHLQLRDELENNSWIVSHQDPSIIFK---EESDTLWQSVLKNMGGKYKVLS--NYPR 186
BLAST of mRNA_L-elsbetiae_contig1804.5174.1 vs. uniprot
Match: A0A835XKX0_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XKX0_9CHLO) HSP 1 Score: 104 bits (260), Expect = 2.450e-22 Identity = 66/204 (32.35%), Postives = 102/204 (50.00%), Query Frame = 3 Query: 45 DGCWAHDIGTVEAVRTARRGSLLIAT----EEIDGGTFHQSVILILSHGRDQGTLGLILNRPGPQRL-HSLPGLQADLA------EVFGESQVFDGGPMGLGTMTVLHGANVEGSDPIMNGVYAGGFESLVEATRQGRVPKDRVRFVHGHSAWSPGQLQGELDHNQWFVAAAAPELITELCDQPFNPLWGKLLRLMGGKYREVA 623 +G WAH EA G LL+A+ + + Q+V+ ++SH ++G++GLILNRP L GL ++A VF S ++ GG + ++HG +EGS + GV+ G + A GR+P +F G W PG+L+ ++ W+ AA + L+ + Q PLW ++LRLMGG Y VA Sbjct: 44 EGLWAHSTPLPEA------GGLLLASLQGPQMLGDDRLWQTVVFVVSHSPEEGSVGLILNRPTGMVLGRKQGGLPLEMAGSVPVQRVFHNSMLYCGGFTAQQVIHLMHGHRLEGSVQVCPGVFLAGEAAATSAVEGGRLPAADFKFFAGALTWGPGELEAQVAAGAWYPAACSRSLVLKPAVQLPVPLWKEVLRLMGGLYAGVA 241
BLAST of mRNA_L-elsbetiae_contig1804.5174.1 vs. uniprot
Match: A0A835WJ62_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WJ62_9CHLO) HSP 1 Score: 105 bits (261), Expect = 5.160e-22 Identity = 64/196 (32.65%), Postives = 110/196 (56.12%), Query Frame = 3 Query: 54 WAHDIGTVEAVRTARRGSLLIATEEIDGGT---FHQSVILILSHGRDQGTLGLILNRPGPQRLHSLPGLQADLAEVFGESQVFDGGPMGLGTMTVLHG-ANVEGSDPIMNGVYAGGFESLVEATRQGRVPKDRVRFVHGHSAWSPGQLQGELDHNQWFVAAAAPELITELCDQPFNP-LWGKLLRLMGGKYREVAQ 626 WAH I E +G+LL+A + + FH++ IL+L HG D G+ G+ILNRP + +P L+ + F + +++ GG +G G + VLH ++++G+ ++ GVY GG ++ +A GR R+ ++ W+PGQL E WF AAA+P+L+ + + P W +++ L+GG Y E+++ Sbjct: 105 WAHIIPKPE------KGALLLAHPLLFQNSQTYFHRAAILLLEHG-DNGSYGVILNRPSTYFIRDIP-LKRPQTQ-FNDCRLYIGGDVGGGEVQVLHPHSDLQGAVEVVKGVYMGGLDAGRDAIDAGRAKAQDFRWFSAYAGWAPGQLAMECKRGVWFTAAASPKLLLKEVEHGQGPSYWHEVMTLLGGDYAELSK 291 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1804.5174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1804.5174.1 >prot_L-elsbetiae_contig1804.5174.1 ID=prot_L-elsbetiae_contig1804.5174.1|Name=mRNA_L-elsbetiae_contig1804.5174.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=114bp MGLGTMTVLHGANVEGSDPIMNGVYAGGFESLVEATRQGRVPKDRVRFVHback to top mRNA from alignment at L-elsbetiae_contig1804:15762..20431- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1804.5174.1 ID=mRNA_L-elsbetiae_contig1804.5174.1|Name=mRNA_L-elsbetiae_contig1804.5174.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4670bp|location=Sequence derived from alignment at L-elsbetiae_contig1804:15762..20431- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1804:15762..20431- >mRNA_L-elsbetiae_contig1804.5174.1 ID=mRNA_L-elsbetiae_contig1804.5174.1|Name=mRNA_L-elsbetiae_contig1804.5174.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=684bp|location=Sequence derived from alignment at L-elsbetiae_contig1804:15762..20431- (Laminarionema elsbetiae ELsaHSoW15)back to top |