Homology
BLAST of mRNA_L-elsbetiae_contig18031.5171.1 vs. uniprot
Match:
A0A6H5KBA3_9PHAE (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBA3_9PHAE)
HSP 1 Score: 125 bits (314), Expect = 7.490e-32
Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 1
Query: 1 NDLRSAIVKEACVLLEKLSSVAGIYMAALMRDVLNVLLQLMANGNSVIVGQVDSCMRHIIAHSRFPRQLKEV 216
NDLRSAIVKEACVLLEKLS AG YMAALMRD+LNVLLQL+ANGNSVIVGQVDSCMRHII HSRFPRQLKEV
Sbjct: 78 NDLRSAIVKEACVLLEKLSDAAGNYMAALMRDMLNVLLQLLANGNSVIVGQVDSCMRHIIEHSRFPRQLKEV 149
BLAST of mRNA_L-elsbetiae_contig18031.5171.1 vs. uniprot
Match:
D8LJI4_ECTSI (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJI4_ECTSI)
HSP 1 Score: 125 bits (314), Expect = 7.570e-32
Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 1
Query: 1 NDLRSAIVKEACVLLEKLSSVAGIYMAALMRDVLNVLLQLMANGNSVIVGQVDSCMRHIIAHSRFPRQLKEV 216
NDLRSAIVKEACVLLEKLS AG YMAALMRD+LNVLLQL+ANGNSVIVGQVDSCMRHII HSRFPRQLKEV
Sbjct: 78 NDLRSAIVKEACVLLEKLSDAAGNYMAALMRDMLNVLLQLLANGNSVIVGQVDSCMRHIIEHSRFPRQLKEV 149
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18031.5171.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 7.49e-32 / Id = 91.67 Expect = 7.57e-32 / Id = 91.67 Sequence A0A6H5KBA3_9PHAE D8LJI4_ECTSI
Match Name E-value Identity Description
A0A6H5KBA3_9PHAE 7.490e-32 91.67 CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
D8LJI4_ECTSI 7.570e-32 91.67 CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 127.1
Seed ortholog evalue 3.3e-27
Seed eggNOG ortholog 2880.D8LJI4
KEGG ko ko:K10423,ko:K10758
Hectar predicted targeting category other localisation
EggNOG free text desc. microtubule binding
EggNOG OGs COG5244@1,KOG4568@2759
EC 1.8.3.2
COG Functional cat. D
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko01000,ko04812
Exons 2
Model size 216
Cds size 216
Stop 0
Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815751.9709034-CDS-L-elsbetiae_contig18031:529..607 1622815751.9709034-CDS-L-elsbetiae_contig18031:529..607 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig18031 530..607 -
1691683079.6718674-CDS-L-elsbetiae_contig18031:529..607 1691683079.6718674-CDS-L-elsbetiae_contig18031:529..607 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig18031 530..607 -
1622815751.986-CDS-L-elsbetiae_contig18031:1919..2057 1622815751.986-CDS-L-elsbetiae_contig18031:1919..2057 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig18031 1920..2057 -
1691683079.6843524-CDS-L-elsbetiae_contig18031:1919..2057 1691683079.6843524-CDS-L-elsbetiae_contig18031:1919..2057 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig18031 1920..2057 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18031.5171.1
>prot_L-elsbetiae_contig18031.5171.1 ID=prot_L-elsbetiae_contig18031.5171.1|Name=mRNA_L-elsbetiae_contig18031.5171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=72bp
NDLRSAIVKEACVLLEKLSSVAGIYMAALMRDVLNVLLQLMANGNSVIVG QVDSCMRHIIAHSRFPRQLKEV back to top mRNA from alignment at L-elsbetiae_contig18031:530..2057-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig18031.5171.1 ID=mRNA_L-elsbetiae_contig18031.5171.1|Name=mRNA_L-elsbetiae_contig18031.5171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1528bp|location=Sequence derived from alignment at L-elsbetiae_contig18031:530..2057- (Laminarionema elsbetiae ELsaHSoW15)AACGATCTTCGATCAGCTATCGTCAAGGAGGCGTGCGTGCTCCTGGAAAA
GCTGTCGTCGGTGGCTGGGATCTACATGGCGGCCCTCATGCGCGACGTGC
TCAACGTCCTTCTTCAGCTTATGGCCAACGGTAACTCG GTGAGGAAAATA
TGGAATACGGCAGTCACACTGGGTCGTCTGGCAAGTCGTAGAGGAGGGAA
GAGGGCCGGTGGGGCAGACGACGAATCAGTCAATAATGAGAGGGGGGGGG
GGGGATACACAGATTCATGACATACATATGTAGCGGGAGAATAGAAACGC
CAAGACCTTGTCTGTTTTGGAAGAGAGGGAAGGAGGGAGGGAGACTGCAG
AGTGGTACCAGACGGTGTTCACGGAAAACACATCTACATATTTAAGATGG
ACGCTTTGCGTGCAGAGCATGGCGGGCGGAGAGGTATGTATCGCACGTCG
TTCTAGCTGCACGCGCTGTCCCAACATCTACGTAATAATGTAAGATGGGG
GCTTTGCGTGCAGAGCATCGCGGGCGGATAGGTTATGTATCGCACGTCGT
TCTAGCTGCACGCACTGTCTCATACATGTGTGTCCTTCCCGTTTATTTTG
GCGACAGTCCCCCCAAGTGGAGACGTGTACTACACCTTGCGGTGTACTTA
GAGGTACTACACTTTGCAGTACATTTGTCTGTACAACTAGACTAGAACCA
ACCGGGGCCACACAGGAGGAGGAGGTGAACACTGGGGCTTTTTCTTCTTT
TTTCTTTTCTTTTTTTGCCCACCTTCCTCCTGCGGTTCTTGCCTTGGGTT
TTATCGCGAGAAGGGTTCAGCTGTCCCTTTCCCTCGTCAACGTGATTATG
TCGAAGTTTGGTACTCACGAGCTTTTCAGCTTTAATCGCTTTCACCTGCA
AAGTCGCAAAAGAAACACTTCTGCTTGGGATTGAATACATACTTCGAAGT
ACATACATGCTTTTTTTTTTTTCTTCTTCACATTTATTTCCAGTGCTCGA
TGGGCTCCCCGTGACGAGGACATCTTGCCAGAGTACTGAACCGTGGTGAC
ACAGAAGGGTCCCTTTCCCCAAGGCCCCCACTCCCCCCCCGTCTGCGGTG
CTTGTTTAAGAGTTTTGTACATACATACATACTGCTCGCGATAAAAGCAT
CACAGGCAGGCAGCGCAGGAGGGGGTCAACCCCCCACCCCCTTCTGTTGT
GACCCCGGTTGGGTCGTCTAGCTAGTCGTAGTGGAGGAAGGGGGCCAATG
GGGCAGACGACGAATAAGCCTATAATAGGAGGGGGGGGAAAAAGAAGAAA
AAAACGTTGGGTCCGGTCCCGCCCCCGCCCCGCACCCGCTCCACCCCTTC
GTTTTTGTACTTTTTTGTGTTTGTTTTTTTTTGTCGTGCCTGTGACACAC
CGATTCGTATCATTTTTCGCCATCGTCGTCGTCGTCAACATCAAACACAG
GTGATCGTGGGACAGGTGGACTCGTGCATGCGGCACATCATCGCCCACTC
GCGCTTCCCAAGACAGCTCAAGGAGGTG back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18031:530..2057-
>mRNA_L-elsbetiae_contig18031.5171.1 ID=mRNA_L-elsbetiae_contig18031.5171.1|Name=mRNA_L-elsbetiae_contig18031.5171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=432bp|location=Sequence derived from alignment at L-elsbetiae_contig18031:530..2057- (Laminarionema elsbetiae ELsaHSoW15) AACGATCTTCGATCAGCTATCGTCAAGGAGGCGTGCGTGCTCCTGGAAAA GCTGTCGTCGGTGGCTGGGATCTACATGGCGGCCCTCATGCGCGACGTGC TCAACGTCCTTCTTCAGCTTATGGCCAACGGTAACTCGAACGATCTTCGA TCAGCTATCGTCAAGGAGGCGTGCGTGCTCCTGGAAAAGCTGTCGTCGGT GGCTGGGATCTACATGGCGGCCCTCATGCGCGACGTGCTCAACGTCCTTC TTCAGCTTATGGCCAACGGTAACTCGGTGATCGTGGGACAGGTGGACTCG TGCATGCGGCACATCATCGCCCACTCGCGCTTCCCAAGACAGCTCAAGGA GGTGGTGATCGTGGGACAGGTGGACTCGTGCATGCGGCACATCATCGCCC ACTCGCGCTTCCCAAGACAGCTCAAGGAGGTG back to top