mRNA_L-elsbetiae_contig17927.5125.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig17927.5125.1
Unique NamemRNA_L-elsbetiae_contig17927.5125.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: D7FWD1_ECTSI (Clathrin heavy chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWD1_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 1.990e-87
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 1 
Query:    7 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE 450
            QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLT N FYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE
Sbjct:  838 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTNNQFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE 985
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BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: A0A835YZH1_9STRA (Clathrin heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH1_9STRA)

HSP 1 Score: 239 bits (611), Expect = 1.840e-70
Identity = 119/150 (79.33%), Postives = 136/150 (90.67%), Query Frame = 1 
Query:    7 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGET--QEPASRRALIEQVVQTALPETKNADE 450
            QVERRNRLRLLQPWLEA V+TGNTETATHNA+GKIYVTLNKDP  FL +N FYDP+VLGKYCEKLDPS+AFLAYK+A G CDDD++RVTSENGL+K+QARYLVE+QD+DLWA+VLT  + +   +EPASRRALI+QVVQTALPETK ADE
Sbjct:  853 QVERRNRLRLLQPWLEARVATGNTETATHNAIGKIYVTLNKDPKNFLLQNQFYDPRVLGKYCEKLDPSLAFLAYKRANGECDDDIIRVTSENGLYKDQARYLVERQDLDLWARVLTPPDMDNTKKEPASRRALIDQVVQTALPETKVADE 1002
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BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: A0A2P4XMC0_9STRA (Clathrin heavy chain n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XMC0_9STRA)

HSP 1 Score: 223 bits (569), Expect = 2.870e-65
Identity = 108/148 (72.97%), Postives = 127/148 (85.81%), Query Frame = 1 
Query:    7 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE 450
            QVE+RNRLRLLQPWLE  V+ GNTETATHNA+GKIY+TLNKDP  FL  N FYD +++GK+CEKLDP++A+LAY++AGGACDDDL+RVT+ENGLFK+ ARYLVE+QD+DLW KVL K E    E  SRRALI+QVVQTALPET N DE
Sbjct:  110 QVEKRNRLRLLQPWLETRVAQGNTETATHNAIGKIYITLNKDPQQFLINNQFYDSEIVGKFCEKLDPALAYLAYRRAGGACDDDLIRVTTENGLFKDLARYLVERQDLDLWGKVLVKQEEGEAESPSRRALIDQVVQTALPETTNPDE 257
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BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: F0XZJ1_AURAN (Clathrin heavy chain n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZJ1_AURAN)

HSP 1 Score: 224 bits (571), Expect = 4.450e-65
Identity = 112/151 (74.17%), Postives = 133/151 (88.08%), Query Frame = 1 
Query:    7 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLT----KAEGETQEPASRRALIEQVVQTALPETKNAD 447
            QVE RNRLRLLQPWLEA ++TGN ET THNA+GKIYVTLN+DPV+FLT + +YDP+VLGKYCEKLDPS+AFLAYK+AGG CD DL+RVT+ENGLFK+QARYLVEKQD++LWA VLT    +A G+  E A+RRALI+QVVQTALPET++ D
Sbjct:  827 QVEHRNRLRLLQPWLEARIATGNQETGTHNAIGKIYVTLNRDPVSFLTNDQYYDPRVLGKYCEKLDPSLAFLAYKRAGGECDADLIRVTTENGLFKDQARYLVEKQDLELWASVLTPPAEEAVGDASE-ANRRALIDQVVQTALPETRDPD 976
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BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: A0A225V906_9STRA (Clathrin heavy chain (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V906_9STRA)

HSP 1 Score: 224 bits (570), Expect = 5.280e-65
Identity = 109/148 (73.65%), Postives = 127/148 (85.81%), Query Frame = 1 
Query:    7 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE 450
            QVE+RNRLRLLQPWLE  V+ GNTETATHNA+GKIY+TLNKDP  FL  N FYD +V+GK+CEKLDP++A+LAY++AGGACDDDL+RVT+ENGLFK+ ARYLVE+QD+DLW KVL K E    E  SRRALI+QVVQTALPET N DE
Sbjct:  446 QVEKRNRLRLLQPWLETRVAQGNTETATHNAIGKIYITLNKDPQQFLINNQFYDSEVVGKFCEKLDPALAYLAYRRAGGACDDDLIRVTTENGLFKDLARYLVERQDLDLWGKVLVKQEEGEPESPSRRALIDQVVQTALPETTNPDE 593
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BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: A0A7S2V2C2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2C2_9STRA)

HSP 1 Score: 223 bits (568), Expect = 9.170e-65
Identity = 109/148 (73.65%), Postives = 127/148 (85.81%), Query Frame = 1 
Query:    7 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE 450
            QVERRNRLRLLQPWLEA ++TGNTETATHNA+GKIY+TLNKDP  FL  N FY P VLG++CEKLDPS+AFLAYK+A G CD+DL+RVTS NGLFK+QARYLVEKQD++LWAKVL       +E + +R+LI+QVVQTALPETKN DE
Sbjct:  848 QVERRNRLRLLQPWLEARIATGNTETATHNAIGKIYITLNKDPQQFLENNQFYSPAVLGRFCEKLDPSLAFLAYKRANGECDEDLIRVTSANGLFKDQARYLVEKQDLELWAKVLMGEFAGEEESSHQRSLIDQVVQTALPETKNPDE 995
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BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: K3WLC2_GLOUD (Clathrin heavy chain n=31 Tax=Oomycota TaxID=4762 RepID=K3WLC2_GLOUD)

HSP 1 Score: 223 bits (568), Expect = 1.130e-64
Identity = 108/148 (72.97%), Postives = 128/148 (86.49%), Query Frame = 1 
Query:    7 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE 450
            QVE+RNRLRLLQPWLE  VS GNTETATHNA+GKIY+TLN++P  FLT N FYD +V+G +CEKLDP++AFLAY++AGGACD+DL+RVT+ENGLFK+ ARYLVE+QD+DLW KVL K E    E  +RRALI+QVVQTALPETKN DE
Sbjct:  853 QVEKRNRLRLLQPWLETRVSQGNTETATHNAIGKIYITLNREPQQFLTNNQFYDSQVVGLFCEKLDPALAFLAYRRAGGACDEDLIRVTTENGLFKDLARYLVERQDLDLWGKVLVKQEEGESESPNRRALIDQVVQTALPETKNPDE 1000
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BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: A0A4D9DAY4_9STRA (Clathrin heavy chain n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAY4_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.130e-64
Identity = 108/148 (72.97%), Postives = 130/148 (87.84%), Query Frame = 1 
Query:    7 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE 450
            QVERRNRLR+ QPWLE++V+TGNTETATHNA+GKIY+TLN+DPV FL  N FYDP V+GKYCEKLDPS+AFLAY++ GGACDDDL+RVT+ENGLFK+QARYL+EK+D DLWAKVL+      +E   RRALI+QVVQTALPET+ A++
Sbjct:  854 QVERRNRLRIAQPWLESLVATGNTETATHNAIGKIYITLNRDPVNFLKNNQFYDPLVIGKYCEKLDPSLAFLAYQRGGGACDDDLIRVTNENGLFKDQARYLIEKRDGDLWAKVLS------EENQHRRALIDQVVQTALPETETAEQ 995
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BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: A0A2D4BEN2_PYTIN (Clathrin heavy chain n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BEN2_PYTIN)

HSP 1 Score: 223 bits (568), Expect = 1.140e-64
Identity = 112/149 (75.17%), Postives = 130/149 (87.25%), Query Frame = 1 
Query:    7 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAE-GETQEPASRRALIEQVVQTALPETKNADE 450
            QVE+RNRLRL QPWLE  V+ GNTETATHNAVGKIYVTLN+DP  FL  N FYD +V+GK+CEKLDP++A LAY++AGGACDDDL+RVT+ENGLFK+ ARYLVE+QD+DLW KVL K E GET+ PA RRALI+Q+VQTALPETKN DE
Sbjct: 1256 QVEKRNRLRLXQPWLETRVAQGNTETATHNAVGKIYVTLNRDPQQFLMNNQFYDSQVVGKFCEKLDPALAVLAYRRAGGACDDDLIRVTTENGLFKDLARYLVERQDLDLWGKVLKKQEEGETESPA-RRALIDQIVQTALPETKNPDE 1403
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BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: F0W5K0_9STRA (Clathrin heavy chain n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W5K0_9STRA)

HSP 1 Score: 222 bits (565), Expect = 2.850e-64
Identity = 109/148 (73.65%), Postives = 127/148 (85.81%), Query Frame = 1 
Query:    7 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE 450
            QVE RNRLRLLQPWLE  VS GNTETATHNAVGKIYVTLN++P  FL  N FYD +V+GK+CEKLDP++AFLAY++AGGACD+DL+RVT +NGLFK+ ARYLVE+QD+DLW KVL K +   QE  +RRALI+QVVQTALPETKN DE
Sbjct:  855 QVETRNRLRLLQPWLETRVSQGNTETATHNAVGKIYVTLNREPQQFLMNNQFYDSEVVGKFCEKLDPALAFLAYRRAGGACDEDLIRVTIDNGLFKDLARYLVERQDLDLWGKVLMKQDENLQESPNRRALIDQVVQTALPETKNPDE 1002
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWD1_ECTSI1.990e-8798.65Clathrin heavy chain n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835YZH1_9STRA1.840e-7079.33Clathrin heavy chain n=1 Tax=Tribonema minus TaxID... [more]
A0A2P4XMC0_9STRA2.870e-6572.97Clathrin heavy chain n=1 Tax=Phytophthora palmivor... [more]
F0XZJ1_AURAN4.450e-6574.17Clathrin heavy chain n=1 Tax=Aureococcus anophagef... [more]
A0A225V906_9STRA5.280e-6573.65Clathrin heavy chain (Fragment) n=1 Tax=Phytophtho... [more]
A0A7S2V2C2_9STRA9.170e-6573.65Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
K3WLC2_GLOUD1.130e-6472.97Clathrin heavy chain n=31 Tax=Oomycota TaxID=4762 ... [more]
A0A4D9DAY4_9STRA1.130e-6472.97Clathrin heavy chain n=2 Tax=Monodopsidaceae TaxID... [more]
A0A2D4BEN2_PYTIN1.140e-6475.17Clathrin heavy chain n=2 Tax=Pythium TaxID=4797 Re... [more]
F0W5K0_9STRA2.850e-6473.65Clathrin heavy chain n=1 Tax=Albugo laibachii Nc14... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17927contigL-elsbetiae_contig17927:1066..2976 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score291.2
Seed ortholog evalue2.8e-76
Seed eggNOG ortholog2880.D7FWD1
Preferred nameCLTC
KEGG koko:K04646
KEGG Pathwayko04142,ko04144,ko04721,ko04961,ko05016,ko05100,map04142,map04144,map04721,map04961,map05016,map05100
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000041,GO:0000139,GO:0000226,GO:0000278,GO:0000280,GO:0000281,GO:0000323,GO:0000578,GO:0000910,GO:0000912,GO:0000915,GO:0001505,GO:0001654,GO:0001745,GO:0002020,GO:0002376,GO:0002478,GO:0002495,GO:0002504,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0005102,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005739,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005802,GO:0005819,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005886,GO:0005905,GO:0005911,GO:0005938,GO:0006109,GO:0006403,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006836,GO:0006886,GO:0006887,GO:0006892,GO:0006895,GO:0006897,GO:0006898,GO:0006907,GO:0006950,GO:0006970,GO:0006996,GO:0007010,GO:0007017,GO:0007028,GO:0007030,GO:0007033,GO:0007034,GO:0007041,GO:0007049,GO:0007051,GO:0007052,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007315,GO:0007316,GO:0007346,GO:0007349,GO:0007350,GO:0007351,GO:0007389,GO:0007423,GO:0007424,GO:0007568,GO:0007591,GO:0007594,GO:0008022,GO:0008092,GO:0008103,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008298,GO:0008340,GO:0008358,GO:0008593,GO:0008595,GO:0009056,GO:0009057,GO:0009267,GO:0009506,GO:0009507,GO:0009536,GO:0009605,GO:0009628,GO:0009653,GO:0009790,GO:0009792,GO:0009798,GO:0009880,GO:0009887,GO:0009889,GO:0009890,GO:0009892,GO:0009898,GO:0009948,GO:0009952,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0009994,GO:0010008,GO:0010118,GO:0010256,GO:0010259,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010623,GO:0010646,GO:0010647,GO:0010827,GO:0010828,GO:0012501,GO:0012505,GO:0012506,GO:0015031,GO:0015629,GO:0015630,GO:0015682,GO:0015833,GO:0015931,GO:0016020,GO:0016043,GO:0016050,GO:0016055,GO:0016079,GO:0016192,GO:0016197,GO:0016324,GO:0016325,GO:0016482,GO:0017156,GO:0019094,GO:0019222,GO:0019538,GO:0019882,GO:0019884,GO:0019886,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019953,GO:0021700,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0022608,GO:0022609,GO:0022610,GO:0023051,GO:0023052,GO:0023056,GO:0023061,GO:0030001,GO:0030029,GO:0030036,GO:0030054,GO:0030100,GO:0030117,GO:0030118,GO:0030120,GO:0030125,GO:0030135,GO:0030136,GO:0030139,GO:0030141,GO:0030154,GO:0030163,GO:0030198,GO:0030276,GO:0030315,GO:0030424,GO:0030435,GO:0030479,GO:0030506,GO:0030587,GO:0030659,GO:0030662,GO:0030665,GO:0030666,GO:0030669,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0030951,GO:0030952,GO:0031032,GO:0031072,GO:0031090,GO:0031152,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031410,GO:0031523,GO:0031623,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0031984,GO:0032051,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0032588,GO:0032799,GO:0032801,GO:0032802,GO:0032879,GO:0032880,GO:0032881,GO:0032885,GO:0032886,GO:0032940,GO:0032991,GO:0033036,GO:0033043,GO:0033218,GO:0033227,GO:0033267,GO:0033363,GO:0033554,GO:0033572,GO:0034381,GO:0034383,GO:0034613,GO:0034622,GO:0034762,GO:0034764,GO:0035002,GO:0035150,GO:0035151,GO:0035152,GO:0035159,GO:0035282,GO:0035567,GO:0036019,GO:0036020,GO:0040008,GO:0042044,GO:0042045,GO:0042147,GO:0042277,GO:0042303,GO:0042383,GO:0042594,GO:0042802,GO:0042886,GO:0042995,GO:0043005,GO:0043062,GO:0043112,GO:0043170,GO:0043195,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043255,GO:0043679,GO:0043933,GO:0043934,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044306,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044430,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044448,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044764,GO:0044837,GO:0045055,GO:0045056,GO:0045176,GO:0045177,GO:0045184,GO:0045202,GO:0045334,GO:0045451,GO:0045747,GO:0045807,GO:0045912,GO:0046324,GO:0046326,GO:0046666,GO:0046667,GO:0046903,GO:0046907,GO:0048002,GO:0048193,GO:0048232,GO:0048259,GO:0048260,GO:0048268,GO:0048285,GO:0048468,GO:0048469,GO:0048471,GO:0048475,GO:0048477,GO:0048489,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048592,GO:0048599,GO:0048609,GO:0048646,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050657,GO:0050658,GO:0050750,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051179,GO:0051225,GO:0051234,GO:0051236,GO:0051239,GO:0051301,GO:0051493,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0055044,GO:0060071,GO:0060236,GO:0060255,GO:0060341,GO:0060541,GO:0060627,GO:0060810,GO:0060811,GO:0061024,GO:0061640,GO:0061645,GO:0062012,GO:0062014,GO:0065003,GO:0065007,GO:0065008,GO:0070325,GO:0070507,GO:0070633,GO:0070727,GO:0070925,GO:0071439,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072512,GO:0072583,GO:0072686,GO:0080090,GO:0090066,GO:0090175,GO:0090224,GO:0090307,GO:0090596,GO:0090702,GO:0097006,GO:0097159,GO:0097443,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0097718,GO:0098552,GO:0098562,GO:0098588,GO:0098590,GO:0098630,GO:0098657,GO:0098743,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098852,GO:0098916,GO:0099003,GO:0099080,GO:0099081,GO:0099120,GO:0099503,GO:0099504,GO:0099512,GO:0099513,GO:0099536,GO:0099537,GO:0099568,GO:0099643,GO:0120025,GO:0120038,GO:0140014,GO:0150034,GO:0198738,GO:1900125,GO:1900126,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902850,GO:1903047,GO:1903076,GO:1903077,GO:1903827,GO:1903828,GO:1904375,GO:1904376,GO:1905114,GO:1905330,GO:1905475,GO:1905476,GO:1990381,GO:1990498,GO:1990763,GO:2000026,GO:2000027,GO:2000369,GO:2000370
EggNOG free text desc.clathrin light chain binding
EggNOG OGsKOG0985@1,KOG0985@2759
Ec32 ortholog descriptionClathrin heavy chain
Ec32 orthologEc-25_000560.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147
Exons3
Model size450
Cds size450
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17927.5125.1prot_L-elsbetiae_contig17927.5125.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig17927 1066..2976 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815747.401036-CDS-L-elsbetiae_contig17927:1065..11581622815747.401036-CDS-L-elsbetiae_contig17927:1065..1158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17927 1066..1158 -
1691683076.5426521-CDS-L-elsbetiae_contig17927:1065..11581691683076.5426521-CDS-L-elsbetiae_contig17927:1065..1158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17927 1066..1158 -
1622815747.4149094-CDS-L-elsbetiae_contig17927:2097..22801622815747.4149094-CDS-L-elsbetiae_contig17927:2097..2280Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17927 2098..2280 -
1691683076.5608778-CDS-L-elsbetiae_contig17927:2097..22801691683076.5608778-CDS-L-elsbetiae_contig17927:2097..2280Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17927 2098..2280 -
1622815747.42666-CDS-L-elsbetiae_contig17927:2802..29761622815747.42666-CDS-L-elsbetiae_contig17927:2802..2976Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17927 2803..2976 -
1691683076.5783262-CDS-L-elsbetiae_contig17927:2802..29761691683076.5783262-CDS-L-elsbetiae_contig17927:2802..2976Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17927 2803..2976 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig17927.5125.1

>prot_L-elsbetiae_contig17927.5125.1 ID=prot_L-elsbetiae_contig17927.5125.1|Name=mRNA_L-elsbetiae_contig17927.5125.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=150bp
LRQVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLT
ENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQ
ARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE
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mRNA from alignment at L-elsbetiae_contig17927:1066..2976-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig17927.5125.1 ID=mRNA_L-elsbetiae_contig17927.5125.1|Name=mRNA_L-elsbetiae_contig17927.5125.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1911bp|location=Sequence derived from alignment at L-elsbetiae_contig17927:1066..2976- (Laminarionema elsbetiae ELsaHSoW15)
CTCCGCCAGGTGGAGAGGCGCAACCGCCTCCGCCTCCTCCAGCCCTGGCT
CGAGGCGATGGTGTCCACGGGGAACACGGAGACGGCCACGCACAACGCCG
TCGGAAAGATCTACGTCACGCTGAACAAGGACCCCGTCACCTTCCTCACC
GAGAACAACTTCTACGACCCCAAGGTATGTATGCAAACGGCAATGGCAGT
CTCTTCACGGAACCCCCAGAGAGAGGGGAAGAGGGGGGGCAGAGAGAGAG
AGAGGGAGAGAGAGAGAGAGAGGGAGAGAGATAGAGAGAGAGAGGGAGAG
AGATAGAGAGAGAGAGAGAGAGAGGGTTCTCCTGCAGCAGTGTTATGGCC
TGCCGTGTGGTTATGCCGGCCTTTTTCCCACTTGTGTTGATTTCGTTTTC
CCGCGTCCTCTCGTGTTCGGGGGATGCTGGCGGACGTTTCTGTGGCAGCG
AGCTTTCTCGTACCCTAAAAAAAGCCTGTGTCCGTCTTGAACACCAGGAC
GTGGCGGAGGTTGTTCTATTTACCCATCCCCGCATTCGACATGTGCCGTA
ATATTATTCTTCTCAATTGTCTCGTTAACAAAAAAAAAACGAAAAAACCG
CACTCGGCATGTGCCCTAATATTATTGTTCTCATTGTCTCGGAAAAACGA
AAACGAAAACAAAAAAAACAAAAAACGAAAAAAACGAAAAAAACAGGTGC
TCGGCAAGTACTGCGAGAAGCTGGACCCGTCCATGGCCTTCCTCGCTTAC
AAGAAGGCCGGCGGCGCGTGCGACGACGATCTCCTCCGCGTCACGAGCGA
GAACGGCCTCTTCAAGAACCAGGCCCGCTACCTCGTCGAGAAGCAGGACA
TGGACCTCTGGGCCAAGGTCCTCACCAAGGTATGTACCTATATGGACCGA
ACGCCTTCGCGTTGAGAAATTTCCTCTTTTTTTTTGGTCTAGGCGTGTGT
AGAGACAGGGGCTCCGTAACCCCAACCCTCAACCAAAACCCCGGCCCCCC
TTTCCTGATTATTGCTCTACTTTTTTTATCCCGTATGTTGGCTTGAGACA
AACTCTGCGAAGGCTGCTGCAAGGTATACATGTGTGTGTGTGTGTATATC
AGCTAGCGTATATGTGTGTGATGTCTCTAGATGGGTACTACCAGTTACGT
ATGTAGGCACGCTGCCCCCCCCCCCCCCCCCCCCCCCCGCCTCTGGCGCC
GGCGGGGGGCGCGGGGGTGGCGGCTTCGGGCGGCGGCCGCCGCCCGGCCA
CCGCCGCCCCAGCCCCNNNNNNNNNNATTAGTGTATTTTTGTGTTCTTGC
GGTCAATGCGTGATGCCGCTTACGTCTTCAGGCAGGCCCCCCCCCCCCCC
CCCCCCACCTGCTGCTGCTGGCGCAGGCAGTGAGCGCTGCGTTGTCGTAT
TCGATATGTTGCTGCCGCACGTCAGCCGTCGACTAAGCTCCCCCCACCTG
GCGAAGAAAAACGCTCCGTGGGGGGGGGGGGGGAGGGTGGTATCTTGAGT
CACCTACGATTTTCACTTCCCGCCGCCGGACCAACTACGATGTGCTCTTC
TCTCCTCTAATCCGCACCTTCCTCTGGAAACCGTTTGTATACTACACCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTGCCGGGGGGGCCGGCG
GGTGGGCCCCGCCCCCGCGCCCCGGAGCCCGCCGCGCGCGGGCGTCGGGG
CGNNNNNNNNNNCTTCGATTTGCTTTTCTCTCCTTTATTCCTCTCCTTCC
TCTGGAAACGGTTTGTATACACCCCCCCCCCCCCCCCCCCCTCATCCTCT
TCCCGTGTGTGTGTGCAGGCCGAGGGTGAGACCCAGGAGCCGGCGTCCCG
GCGCGCCCTGATCGAGCAAGTAGTGCAGACGGCGCTCCCCGAGACGAAGA
ACGCCGACGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig17927:1066..2976-

>mRNA_L-elsbetiae_contig17927.5125.1 ID=mRNA_L-elsbetiae_contig17927.5125.1|Name=mRNA_L-elsbetiae_contig17927.5125.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=900bp|location=Sequence derived from alignment at L-elsbetiae_contig17927:1066..2976- (Laminarionema elsbetiae ELsaHSoW15)
CTCCGCCAGGTGGAGAGGCGCAACCGCCTCCGCCTCCTCCAGCCCTGGCT
CGAGGCGATGGTGTCCACGGGGAACACGGAGACGGCCACGCACAACGCCG
TCGGAAAGATCTACGTCACGCTGAACAAGGACCCCGTCACCTTCCTCACC
GAGAACAACTTCTACGACCCCAAGCTCCGCCAGGTGGAGAGGCGCAACCG
CCTCCGCCTCCTCCAGCCCTGGCTCGAGGCGATGGTGTCCACGGGGAACA
CGGAGACGGCCACGCACAACGCCGTCGGAAAGATCTACGTCACGCTGAAC
AAGGACCCCGTCACCTTCCTCACCGAGAACAACTTCTACGACCCCAAGGT
GCTCGGCAAGTACTGCGAGAAGCTGGACCCGTCCATGGCCTTCCTCGCTT
ACAAGAAGGCCGGCGGCGCGTGCGACGACGATCTCCTCCGCGTCACGAGC
GAGAACGGCCTCTTCAAGAACCAGGCCCGCTACCTCGTCGAGAAGCAGGA
CATGGACCTCTGGGCCAAGGTCCTCACCAAGGTGCTCGGCAAGTACTGCG
AGAAGCTGGACCCGTCCATGGCCTTCCTCGCTTACAAGAAGGCCGGCGGC
GCGTGCGACGACGATCTCCTCCGCGTCACGAGCGAGAACGGCCTCTTCAA
GAACCAGGCCCGCTACCTCGTCGAGAAGCAGGACATGGACCTCTGGGCCA
AGGTCCTCACCAAGGCCGAGGGTGAGACCCAGGAGCCGGCGTCCCGGCGC
GCCCTGATCGAGCAAGTAGTGCAGACGGCGCTCCCCGAGACGAAGAACGC
CGACGAGGCCGAGGGTGAGACCCAGGAGCCGGCGTCCCGGCGCGCCCTGA
TCGAGCAAGTAGTGCAGACGGCGCTCCCCGAGACGAAGAACGCCGACGAG
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