prot_L-elsbetiae_contig17927.5125.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig17927.5125.1
Unique Name	prot_L-elsbetiae_contig17927.5125.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	150

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: D7FWD1_ECTSI (Clathrin heavy chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWD1_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 1.990e-87
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0

Query:    3 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE 150
            QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLT N FYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE
Sbjct:  838 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTNNQFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE 985

[Close]

BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: A0A835YZH1_9STRA (Clathrin heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH1_9STRA)

HSP 1 Score: 239 bits (611), Expect = 1.840e-70
Identity = 119/150 (79.33%), Postives = 136/150 (90.67%), Query Frame = 0

Query:    3 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGET--QEPASRRALIEQVVQTALPETKNADE 150
            QVERRNRLRLLQPWLEA V+TGNTETATHNA+GKIYVTLNKDP  FL +N FYDP+VLGKYCEKLDPS+AFLAYK+A G CDDD++RVTSENGL+K+QARYLVE+QD+DLWA+VLT  + +   +EPASRRALI+QVVQTALPETK ADE
Sbjct:  853 QVERRNRLRLLQPWLEARVATGNTETATHNAIGKIYVTLNKDPKNFLLQNQFYDPRVLGKYCEKLDPSLAFLAYKRANGECDDDIIRVTSENGLYKDQARYLVERQDLDLWARVLTPPDMDNTKKEPASRRALIDQVVQTALPETKVADE 1002

[Close]

BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: A0A2P4XMC0_9STRA (Clathrin heavy chain n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XMC0_9STRA)

HSP 1 Score: 223 bits (569), Expect = 2.870e-65
Identity = 108/148 (72.97%), Postives = 127/148 (85.81%), Query Frame = 0

Query:    3 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE 150
            QVE+RNRLRLLQPWLE  V+ GNTETATHNA+GKIY+TLNKDP  FL  N FYD +++GK+CEKLDP++A+LAY++AGGACDDDL+RVT+ENGLFK+ ARYLVE+QD+DLW KVL K E    E  SRRALI+QVVQTALPET N DE
Sbjct:  110 QVEKRNRLRLLQPWLETRVAQGNTETATHNAIGKIYITLNKDPQQFLINNQFYDSEIVGKFCEKLDPALAYLAYRRAGGACDDDLIRVTTENGLFKDLARYLVERQDLDLWGKVLVKQEEGEAESPSRRALIDQVVQTALPETTNPDE 257

[Close]

BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: F0XZJ1_AURAN (Clathrin heavy chain n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZJ1_AURAN)

HSP 1 Score: 224 bits (571), Expect = 4.450e-65
Identity = 112/151 (74.17%), Postives = 133/151 (88.08%), Query Frame = 0

Query:    3 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLT----KAEGETQEPASRRALIEQVVQTALPETKNAD 149
            QVE RNRLRLLQPWLEA ++TGN ET THNA+GKIYVTLN+DPV+FLT + +YDP+VLGKYCEKLDPS+AFLAYK+AGG CD DL+RVT+ENGLFK+QARYLVEKQD++LWA VLT    +A G+  E A+RRALI+QVVQTALPET++ D
Sbjct:  827 QVEHRNRLRLLQPWLEARIATGNQETGTHNAIGKIYVTLNRDPVSFLTNDQYYDPRVLGKYCEKLDPSLAFLAYKRAGGECDADLIRVTTENGLFKDQARYLVEKQDLELWASVLTPPAEEAVGDASE-ANRRALIDQVVQTALPETRDPD 976

[Close]

BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: A0A225V906_9STRA (Clathrin heavy chain (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V906_9STRA)

HSP 1 Score: 224 bits (570), Expect = 5.280e-65
Identity = 109/148 (73.65%), Postives = 127/148 (85.81%), Query Frame = 0

Query:    3 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE 150
            QVE+RNRLRLLQPWLE  V+ GNTETATHNA+GKIY+TLNKDP  FL  N FYD +V+GK+CEKLDP++A+LAY++AGGACDDDL+RVT+ENGLFK+ ARYLVE+QD+DLW KVL K E    E  SRRALI+QVVQTALPET N DE
Sbjct:  446 QVEKRNRLRLLQPWLETRVAQGNTETATHNAIGKIYITLNKDPQQFLINNQFYDSEVVGKFCEKLDPALAYLAYRRAGGACDDDLIRVTTENGLFKDLARYLVERQDLDLWGKVLVKQEEGEPESPSRRALIDQVVQTALPETTNPDE 593

[Close]

BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: A0A7S2V2C2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2C2_9STRA)

HSP 1 Score: 223 bits (568), Expect = 9.170e-65
Identity = 109/148 (73.65%), Postives = 127/148 (85.81%), Query Frame = 0

Query:    3 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE 150
            QVERRNRLRLLQPWLEA ++TGNTETATHNA+GKIY+TLNKDP  FL  N FY P VLG++CEKLDPS+AFLAYK+A G CD+DL+RVTS NGLFK+QARYLVEKQD++LWAKVL       +E + +R+LI+QVVQTALPETKN DE
Sbjct:  848 QVERRNRLRLLQPWLEARIATGNTETATHNAIGKIYITLNKDPQQFLENNQFYSPAVLGRFCEKLDPSLAFLAYKRANGECDEDLIRVTSANGLFKDQARYLVEKQDLELWAKVLMGEFAGEEESSHQRSLIDQVVQTALPETKNPDE 995

[Close]

BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: K3WLC2_GLOUD (Clathrin heavy chain n=31 Tax=Oomycota TaxID=4762 RepID=K3WLC2_GLOUD)

HSP 1 Score: 223 bits (568), Expect = 1.130e-64
Identity = 108/148 (72.97%), Postives = 128/148 (86.49%), Query Frame = 0

Query:    3 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE 150
            QVE+RNRLRLLQPWLE  VS GNTETATHNA+GKIY+TLN++P  FLT N FYD +V+G +CEKLDP++AFLAY++AGGACD+DL+RVT+ENGLFK+ ARYLVE+QD+DLW KVL K E    E  +RRALI+QVVQTALPETKN DE
Sbjct:  853 QVEKRNRLRLLQPWLETRVSQGNTETATHNAIGKIYITLNREPQQFLTNNQFYDSQVVGLFCEKLDPALAFLAYRRAGGACDEDLIRVTTENGLFKDLARYLVERQDLDLWGKVLVKQEEGESESPNRRALIDQVVQTALPETKNPDE 1000

[Close]

BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: A0A4D9DAY4_9STRA (Clathrin heavy chain n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAY4_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.130e-64
Identity = 108/148 (72.97%), Postives = 130/148 (87.84%), Query Frame = 0

Query:    3 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE 150
            QVERRNRLR+ QPWLE++V+TGNTETATHNA+GKIY+TLN+DPV FL  N FYDP V+GKYCEKLDPS+AFLAY++ GGACDDDL+RVT+ENGLFK+QARYL+EK+D DLWAKVL+      +E   RRALI+QVVQTALPET+ A++
Sbjct:  854 QVERRNRLRIAQPWLESLVATGNTETATHNAIGKIYITLNRDPVNFLKNNQFYDPLVIGKYCEKLDPSLAFLAYQRGGGACDDDLIRVTNENGLFKDQARYLIEKRDGDLWAKVLS------EENQHRRALIDQVVQTALPETETAEQ 995

[Close]

BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: A0A2D4BEN2_PYTIN (Clathrin heavy chain n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BEN2_PYTIN)

HSP 1 Score: 223 bits (568), Expect = 1.140e-64
Identity = 112/149 (75.17%), Postives = 130/149 (87.25%), Query Frame = 0

Query:    3 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAE-GETQEPASRRALIEQVVQTALPETKNADE 150
            QVE+RNRLRL QPWLE  V+ GNTETATHNAVGKIYVTLN+DP  FL  N FYD +V+GK+CEKLDP++A LAY++AGGACDDDL+RVT+ENGLFK+ ARYLVE+QD+DLW KVL K E GET+ PA RRALI+Q+VQTALPETKN DE
Sbjct: 1256 QVEKRNRLRLXQPWLETRVAQGNTETATHNAVGKIYVTLNRDPQQFLMNNQFYDSQVVGKFCEKLDPALAVLAYRRAGGACDDDLIRVTTENGLFKDLARYLVERQDLDLWGKVLKKQEEGETESPA-RRALIDQIVQTALPETKNPDE 1403

[Close]

BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Match: F0W5K0_9STRA (Clathrin heavy chain n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W5K0_9STRA)

HSP 1 Score: 222 bits (565), Expect = 2.850e-64
Identity = 109/148 (73.65%), Postives = 127/148 (85.81%), Query Frame = 0

Query:    3 QVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLTENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE 150
            QVE RNRLRLLQPWLE  VS GNTETATHNAVGKIYVTLN++P  FL  N FYD +V+GK+CEKLDP++AFLAY++AGGACD+DL+RVT +NGLFK+ ARYLVE+QD+DLW KVL K +   QE  +RRALI+QVVQTALPETKN DE
Sbjct:  855 QVETRNRLRLLQPWLETRVSQGNTETATHNAVGKIYVTLNREPQQFLMNNQFYDSEVVGKFCEKLDPALAFLAYRRAGGACDEDLIRVTIDNGLFKDLARYLVERQDLDLWGKVLMKQDENLQESPNRRALIDQVVQTALPETKNPDE 1002

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig17927.5125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWD1_ECTSI	1.990e-87	98.65	Clathrin heavy chain n=2 Tax=Ectocarpus TaxID=2879...	[more]
A0A835YZH1_9STRA	1.840e-70	79.33	Clathrin heavy chain n=1 Tax=Tribonema minus TaxID...	[more]
A0A2P4XMC0_9STRA	2.870e-65	72.97	Clathrin heavy chain n=1 Tax=Phytophthora palmivor...	[more]
F0XZJ1_AURAN	4.450e-65	74.17	Clathrin heavy chain n=1 Tax=Aureococcus anophagef...	[more]
A0A225V906_9STRA	5.280e-65	73.65	Clathrin heavy chain (Fragment) n=1 Tax=Phytophtho...	[more]
A0A7S2V2C2_9STRA	9.170e-65	73.65	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
K3WLC2_GLOUD	1.130e-64	72.97	Clathrin heavy chain n=31 Tax=Oomycota TaxID=4762 ...	[more]
A0A4D9DAY4_9STRA	1.130e-64	72.97	Clathrin heavy chain n=2 Tax=Monodopsidaceae TaxID...	[more]
A0A2D4BEN2_PYTIN	1.140e-64	75.17	Clathrin heavy chain n=2 Tax=Pythium TaxID=4797 Re...	[more]
F0W5K0_9STRA	2.850e-64	73.65	Clathrin heavy chain n=1 Tax=Albugo laibachii Nc14...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	SMART	SM00299	CLH_2	coord: 2..128 e-value: 1.4E-10 score: 51.2
IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	PFAM	PF00637	Clathrin	coord: 3..118 e-value: 2.8E-22 score: 79.1
IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	PROSITE	PS50236	CHCR	coord: 1..129 score: 19.899
None	No IPR available	PANTHER	PTHR10292	CLATHRIN HEAVY CHAIN RELATED	coord: 3..149
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 6..80

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig17927	contig	L-elsbetiae_contig17927:1066..2976 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig17927.5125.1	mRNA_L-elsbetiae_contig17927.5125.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig17927 1066..2976 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig17927.5125.1 ID=prot_L-elsbetiae_contig17927.5125.1|Name=mRNA_L-elsbetiae_contig17927.5125.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=150bp
LRQVERRNRLRLLQPWLEAMVSTGNTETATHNAVGKIYVTLNKDPVTFLT
ENNFYDPKVLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQ
ARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000547	Clathrin_H-chain/VPS_repeat
IPR016024	ARM-type_fold