mRNA_L-elsbetiae_contig17825.5080.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: D8LGK8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK8_ECTSI) HSP 1 Score: 380 bits (977), Expect = 3.110e-127 Identity = 265/316 (83.86%), Postives = 275/316 (87.03%), Query Frame = 1 Query: 1 LCSLLVSCGGLGEETIKVWQDLDALSAITSALEAHSVFEGGGDEDVLPAMLFGLATPLLTNSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEADKASRAARQRLAEAFLRLLAERREWVARSLAMAANASPTDLSGGQAPPA-PVTINNLLVNSLAHADLLGAFTRLTPVRLRAQAVAAARKCEADGTFAAGFAQQLTTLMGLGGQQELTRRMAGHTVQKINNKEAARTANIKCSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAECKK 945 L SLLVSCGGLGE+TI VWQ+LDALSAITSALE+HSVFEGGGDEDVLPAMLFGLATPLLTN Q XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E DKASRAARQRLAEAFLRLLAERREWVARSLAMAANASPTDLSGG A A PVTINNLLVNSLAHADLLGAFTRLTPVRLRAQAVAAAR+CE DGTFA GF QL L+GLGGQQEL RRMAGHTVQKI NKEAAR ANIKC+ CG+RQGNA+GG KFKVCSRCQ AMYCSGECQ AHWK HK EC++ Sbjct: 163 LNSLLVSCGGLGEDTINVWQELDALSAITSALESHSVFEGGGDEDVLPAMLFGLATPLLTNFQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDATAGAGAVVDA-ETDKASRAARQRLAEAFLRLLAERREWVARSLAMAANASPTDLSGGGATAAAPVTINNLLVNSLAHADLLGAFTRLTPVRLRAQAVAAARQCETDGTFAPGFGAQLARLLGLGGQQELNRRMAGHTVQKIKNKEAARAANIKCAM--CGKRQGNASGGAKFKVCSRCQVAMYCSGECQKAHWKT-HKMECRR 474
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: A0A6H5KPW0_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPW0_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 4.460e-12 Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 706 GGQQELTRRMAGHTVQKINNKEAARTANIKCSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAECKKK 948 GG+Q + R GH +++ + A + CSR TCG+RQG+ G FK C RC++ +YCS +CQVAHWKE HK ECKKK Sbjct: 360 GGKQVPSTR--GHLNVVLSDIKRGADAAVLCSRETCGRRQGDVKEG--FKRCGRCRTTVYCSKDCQVAHWKEKHKMECKKK 436
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: D8M496_BLAHO (MYND-type domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M496_BLAHO) HSP 1 Score: 63.5 bits (153), Expect = 1.810e-8 Identity = 27/49 (55.10%), Postives = 32/49 (65.31%), Query Frame = 1 Query: 796 CSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAECK 942 CS P CG + +FK CSRC+SA YCS +CQ AHWK GH+ ECK Sbjct: 7 CSNPLCGNTESRPG---EFKKCSRCKSACYCSKKCQSAHWKNGHREECK 52
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: A0A196SGB7_BLAHN (MYND-type zinc finger protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SGB7_BLAHN) HSP 1 Score: 63.2 bits (152), Expect = 2.470e-8 Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 1 Query: 796 CSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAEC 939 CS P CG + +FK CSRC++A YCS ECQ+ HWK GHK EC Sbjct: 7 CSNPNCGNTESKPG---EFKKCSRCKTACYCSKECQLEHWKNGHKKEC 51
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: A0A150GXI9_GONPE (MYND-type domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GXI9_GONPE) HSP 1 Score: 64.7 bits (156), Expect = 8.360e-8 Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 1 Query: 769 EAARTANIK-CSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAECK 942 EA A I+ C+R C +G A G K CSRC++ YCS CQ AHWK GHKAECK Sbjct: 1033 EAVAAAGIRPCARAGCNSLEGPAESGLTPKRCSRCKAVYYCSSACQAAHWKAGHKAECK 1091
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: A0A835Y7F4_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y7F4_9CHLO) HSP 1 Score: 63.5 bits (153), Expect = 1.730e-7 Identity = 32/81 (39.51%), Postives = 38/81 (46.91%), Query Frame = 1 Query: 697 MGLGGQQELTRRMAGHTVQKINNKEAARTANIKCSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAEC 939 + LG E MA + K A C+ P C G++ G + K C C A YCSGECQ AHWK GHKA C Sbjct: 602 LSLGPLPETVAEMAAEAERLAALKAEAWALLTACANPACANLAGDSEAGLQLKRCRGCAQASYCSGECQAAHWKAGHKAVC 682
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: A0A835XKV2_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XKV2_9CHLO) HSP 1 Score: 62.0 bits (149), Expect = 6.190e-7 Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 1 Query: 796 CSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAEC 939 C+ P C +G+ G + + C+RC SA YC ECQ AHW+ GHKAEC Sbjct: 941 CANPACANLEGDGEAGLRLQRCARCGSAAYCCRECQRAHWRAGHKAEC 988
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: A0A835XGX9_9CHLO (DNA damage-binding protein 1 n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XGX9_9CHLO) HSP 1 Score: 61.6 bits (148), Expect = 9.590e-7 Identity = 24/48 (50.00%), Postives = 29/48 (60.42%), Query Frame = 1 Query: 796 CSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAEC 939 CS P C G++ G + + C RC A YC ECQ AHW+ GHKAEC Sbjct: 791 CSNPACANLAGDSEAGLRLQRCGRCVRASYCCRECQTAHWRSGHKAEC 838
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: A0A835Y9K9_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y9K9_9CHLO) HSP 1 Score: 61.2 bits (147), Expect = 1.160e-6 Identity = 25/48 (52.08%), Postives = 29/48 (60.42%), Query Frame = 1 Query: 796 CSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAEC 939 C+ P C G++ G + K C C A YCSGECQ AHWK GHKA C Sbjct: 1225 CANPACVNLAGDSEAGLQLKRCRGCAQASYCSGECQAAHWKAGHKAVC 1272
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: A0A835XNU0_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XNU0_9CHLO) HSP 1 Score: 60.8 bits (146), Expect = 1.380e-6 Identity = 22/49 (44.90%), Postives = 32/49 (65.31%), Query Frame = 1 Query: 796 CSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAECK 942 C+ P C +G++ + + C+RC+ YC ECQ+AHW+ GHKAECK Sbjct: 743 CANPACASLEGDSEADVRLQQCARCRRVSYCCRECQMAHWRAGHKAECK 791 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17825.5080.1 >prot_L-elsbetiae_contig17825.5080.1 ID=prot_L-elsbetiae_contig17825.5080.1|Name=mRNA_L-elsbetiae_contig17825.5080.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=317bp LCSLLVSCGGLGEETIKVWQDLDALSAITSALEAHSVFEGGGDEDVLPAMback to top mRNA from alignment at L-elsbetiae_contig17825:155..2312- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17825.5080.1 ID=mRNA_L-elsbetiae_contig17825.5080.1|Name=mRNA_L-elsbetiae_contig17825.5080.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2158bp|location=Sequence derived from alignment at L-elsbetiae_contig17825:155..2312- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17825:155..2312- >mRNA_L-elsbetiae_contig17825.5080.1 ID=mRNA_L-elsbetiae_contig17825.5080.1|Name=mRNA_L-elsbetiae_contig17825.5080.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1902bp|location=Sequence derived from alignment at L-elsbetiae_contig17825:155..2312- (Laminarionema elsbetiae ELsaHSoW15)back to top |