prot_L-elsbetiae_contig17825.5080.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17825.5080.1
Unique Nameprot_L-elsbetiae_contig17825.5080.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length317
Homology
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: D8LGK8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK8_ECTSI)

HSP 1 Score: 380 bits (977), Expect = 3.110e-127
Identity = 265/316 (83.86%), Postives = 275/316 (87.03%), Query Frame = 0
Query:    1 LCSLLVSCGGLGEETIKVWQDLDALSAITSALEAHSVFEGGGDEDVLPAMLFGLATPLLTNSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEADKASRAARQRLAEAFLRLLAERREWVARSLAMAANASPTDLSGGQAPPA-PVTINNLLVNSLAHADLLGAFTRLTPVRLRAQAVAAARKCEADGTFAAGFAQQLTTLMGLGGQQELTRRMAGHTVQKINNKEAARTANIKCSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAECKK 315
            L SLLVSCGGLGE+TI VWQ+LDALSAITSALE+HSVFEGGGDEDVLPAMLFGLATPLLTN Q XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              E DKASRAARQRLAEAFLRLLAERREWVARSLAMAANASPTDLSGG A  A PVTINNLLVNSLAHADLLGAFTRLTPVRLRAQAVAAAR+CE DGTFA GF  QL  L+GLGGQQEL RRMAGHTVQKI NKEAAR ANIKC+   CG+RQGNA+GG KFKVCSRCQ AMYCSGECQ AHWK  HK EC++
Sbjct:  163 LNSLLVSCGGLGEDTINVWQELDALSAITSALESHSVFEGGGDEDVLPAMLFGLATPLLTNFQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDATAGAGAVVDA-ETDKASRAARQRLAEAFLRLLAERREWVARSLAMAANASPTDLSGGGATAAAPVTINNLLVNSLAHADLLGAFTRLTPVRLRAQAVAAARQCETDGTFAPGFGAQLARLLGLGGQQELNRRMAGHTVQKIKNKEAARAANIKCAM--CGKRQGNASGGAKFKVCSRCQVAMYCSGECQKAHWKT-HKMECRR 474          
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: A0A6H5KPW0_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPW0_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 4.460e-12
Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 0
Query:  236 GGQQELTRRMAGHTVQKINNKEAARTANIKCSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAECKKK 316
            GG+Q  + R  GH    +++ +    A + CSR TCG+RQG+   G  FK C RC++ +YCS +CQVAHWKE HK ECKKK
Sbjct:  360 GGKQVPSTR--GHLNVVLSDIKRGADAAVLCSRETCGRRQGDVKEG--FKRCGRCRTTVYCSKDCQVAHWKEKHKMECKKK 436          
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: D8M496_BLAHO (MYND-type domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M496_BLAHO)

HSP 1 Score: 63.5 bits (153), Expect = 1.810e-8
Identity = 27/49 (55.10%), Postives = 32/49 (65.31%), Query Frame = 0
Query:  266 CSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAECK 314
            CS P CG  +       +FK CSRC+SA YCS +CQ AHWK GH+ ECK
Sbjct:    7 CSNPLCGNTESRPG---EFKKCSRCKSACYCSKKCQSAHWKNGHREECK 52          
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: A0A196SGB7_BLAHN (MYND-type zinc finger protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SGB7_BLAHN)

HSP 1 Score: 63.2 bits (152), Expect = 2.470e-8
Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 0
Query:  266 CSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAEC 313
            CS P CG  +       +FK CSRC++A YCS ECQ+ HWK GHK EC
Sbjct:    7 CSNPNCGNTESKPG---EFKKCSRCKTACYCSKECQLEHWKNGHKKEC 51          
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: A0A150GXI9_GONPE (MYND-type domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GXI9_GONPE)

HSP 1 Score: 64.7 bits (156), Expect = 8.360e-8
Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 0
Query:  257 EAARTANIK-CSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAECK 314
            EA   A I+ C+R  C   +G A  G   K CSRC++  YCS  CQ AHWK GHKAECK
Sbjct: 1033 EAVAAAGIRPCARAGCNSLEGPAESGLTPKRCSRCKAVYYCSSACQAAHWKAGHKAECK 1091          
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: A0A835Y7F4_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y7F4_9CHLO)

HSP 1 Score: 63.5 bits (153), Expect = 1.730e-7
Identity = 32/81 (39.51%), Postives = 38/81 (46.91%), Query Frame = 0
Query:  233 MGLGGQQELTRRMAGHTVQKINNKEAARTANIKCSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAEC 313
            + LG   E    MA    +    K  A      C+ P C    G++  G + K C  C  A YCSGECQ AHWK GHKA C
Sbjct:  602 LSLGPLPETVAEMAAEAERLAALKAEAWALLTACANPACANLAGDSEAGLQLKRCRGCAQASYCSGECQAAHWKAGHKAVC 682          
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: A0A835XKV2_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XKV2_9CHLO)

HSP 1 Score: 62.0 bits (149), Expect = 6.190e-7
Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 0
Query:  266 CSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAEC 313
            C+ P C   +G+   G + + C+RC SA YC  ECQ AHW+ GHKAEC
Sbjct:  941 CANPACANLEGDGEAGLRLQRCARCGSAAYCCRECQRAHWRAGHKAEC 988          
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: A0A835XGX9_9CHLO (DNA damage-binding protein 1 n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XGX9_9CHLO)

HSP 1 Score: 61.6 bits (148), Expect = 9.590e-7
Identity = 24/48 (50.00%), Postives = 29/48 (60.42%), Query Frame = 0
Query:  266 CSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAEC 313
            CS P C    G++  G + + C RC  A YC  ECQ AHW+ GHKAEC
Sbjct:  791 CSNPACANLAGDSEAGLRLQRCGRCVRASYCCRECQTAHWRSGHKAEC 838          
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: A0A835Y9K9_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y9K9_9CHLO)

HSP 1 Score: 61.2 bits (147), Expect = 1.160e-6
Identity = 25/48 (52.08%), Postives = 29/48 (60.42%), Query Frame = 0
Query:  266 CSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAEC 313
            C+ P C    G++  G + K C  C  A YCSGECQ AHWK GHKA C
Sbjct: 1225 CANPACVNLAGDSEAGLQLKRCRGCAQASYCSGECQAAHWKAGHKAVC 1272          
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Match: A0A835XNU0_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XNU0_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 1.380e-6
Identity = 22/49 (44.90%), Postives = 32/49 (65.31%), Query Frame = 0
Query:  266 CSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGECQVAHWKEGHKAECK 314
            C+ P C   +G++    + + C+RC+   YC  ECQ+AHW+ GHKAECK
Sbjct:  743 CANPACASLEGDSEADVRLQQCARCRRVSYCCRECQMAHWRAGHKAECK 791          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17825.5080.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGK8_ECTSI3.110e-12783.86MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KPW0_9PHAE4.460e-1249.38MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
D8M496_BLAHO1.810e-855.10MYND-type domain-containing protein n=1 Tax=Blasto... [more]
A0A196SGB7_BLAHN2.470e-854.17MYND-type zinc finger protein n=1 Tax=Blastocystis... [more]
A0A150GXI9_GONPE8.360e-852.54MYND-type domain-containing protein n=1 Tax=Gonium... [more]
A0A835Y7F4_9CHLO1.730e-739.51MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A835XKV2_9CHLO6.190e-750.00MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A835XGX9_9CHLO9.590e-750.00DNA damage-binding protein 1 n=1 Tax=Edaphochlamys... [more]
A0A835Y9K9_9CHLO1.160e-652.08MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A835XNU0_9CHLO1.380e-644.90MYND-type domain-containing protein n=1 Tax=Edapho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 112..132
NoneNo IPR availableGENE3D3.30.60.180coord: 257..316
e-value: 1.1E-9
score: 39.9
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 282..314
IPR001859Trypanosoma cruzi ribosomal protein P2-likePRINTSPR00456RIBOSOMALP2coord: 74..85
score: 41.67
coord: 86..100
score: 65.33
coord: 26..37
score: 41.67
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 283..313
e-value: 1.3E-7
score: 31.6
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 268..313
score: 11.075

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17825contigL-elsbetiae_contig17825:155..2312 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17825.5080.1mRNA_L-elsbetiae_contig17825.5080.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17825 155..2312 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17825.5080.1 ID=prot_L-elsbetiae_contig17825.5080.1|Name=mRNA_L-elsbetiae_contig17825.5080.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=317bp
LCSLLVSCGGLGEETIKVWQDLDALSAITSALEAHSVFEGGGDEDVLPAM
LFGLATPLLTNSQQQQRARQQQQQPATATQTAAVAAAASGEGAEAAAAAA
AATPSKKEDAAAAAAAAAAAAVEEEADKASRAARQRLAEAFLRLLAERRE
WVARSLAMAANASPTDLSGGQAPPAPVTINNLLVNSLAHADLLGAFTRLT
PVRLRAQAVAAARKCEADGTFAAGFAQQLTTLMGLGGQQELTRRMAGHTV
QKINNKEAARTANIKCSRPTCGQRQGNAAGGCKFKVCSRCQSAMYCSGEC
QVAHWKEGHKAECKKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001859T.cruzi_P2-like
IPR002893Znf_MYND