mRNA_L-elsbetiae_contig178.5066.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig178.5066.1 vs. uniprot
Match: A0A6H5LJ37_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LJ37_9PHAE) HSP 1 Score: 191 bits (486), Expect = 1.130e-55 Identity = 98/117 (83.76%), Postives = 104/117 (88.89%), Query Frame = 2 Query: 2 TISEDLRNALNAFLYRTGESTDKFMLVHVSNQPEQFD*AVNDRVNEMVPFGLPGREERLRMVNLYMKGYLLDPPGRVKAITVDGVEE-----VADLTEGFSGREIAKLAIAWQAAAY 337 TISEDLRNALNAFLYRTGESTDKFMLV+ SNQPEQFD AVNDR++EMV F LPGREERLRMVNLYMK YLLDPPG+ K I VDG+E+ VADLTEGFSGREIAKLAIAWQAAAY Sbjct: 433 TISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVRFDLPGREERLRMVNLYMKNYLLDPPGKAKVIRVDGIEDSHLQDVADLTEGFSGREIAKLAIAWQAAAY 549
BLAST of mRNA_L-elsbetiae_contig178.5066.1 vs. uniprot
Match: A0A835YR91_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR91_9STRA) HSP 1 Score: 169 bits (429), Expect = 1.710e-47 Identity = 86/116 (74.14%), Postives = 97/116 (83.62%), Query Frame = 2 Query: 5 ISEDLRNALNAFLYRTGESTDKFMLVHVSNQPEQFD*AVNDRVNEMVPFGLPGREERLRMVNLYMKGYLLDPPGRVKAITVDGVEE-----VADLTEGFSGREIAKLAIAWQAAAY 337 ISEDLRNALNAFLYRTGE+TDKFMLV+ SNQPEQFD AVNDR++EMVPF LPGR+ER+RM+NLYM +LL G+ K I V GVE+ AD TEGFSGREI+KLAIAWQAAAY Sbjct: 420 ISEDLRNALNAFLYRTGEATDKFMLVYASNQPEQFDWAVNDRIDEMVPFELPGRDERMRMINLYMNKFLLAKTGKAKTIVVQGVEDSHLQAAADATEGFSGREISKLAIAWQAAAY 535
BLAST of mRNA_L-elsbetiae_contig178.5066.1 vs. uniprot
Match: A0A7S2Y4I1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4I1_9STRA) HSP 1 Score: 153 bits (386), Expect = 2.160e-44 Identity = 84/118 (71.19%), Postives = 93/118 (78.81%), Query Frame = 2 Query: 5 ISEDLRNALNAFLYRTGESTDKFMLVHVSNQPEQFD*AVNDRVNEMVPFGLPGREERLRMVNLYMKGYLLDPPGRVK--AITVDGVE-----EVADLTEGFSGREIAKLAIAWQAAAY 337 ISEDLRNALNAFLYRTGE+T KFMLV+ SNQP+QFD A+NDR++EMV F LPG EER RMV+LYMK YLLD K AITV+ +E E A TE FSGREIAKLAIAWQAAAY Sbjct: 74 ISEDLRNALNAFLYRTGEATGKFMLVYASNQPDQFDWAINDRIDEMVEFQLPGLEERKRMVSLYMKKYLLDQQDAAKGRAITVEDIEDNHIDEAAKATEHFSGREIAKLAIAWQAAAY 191
BLAST of mRNA_L-elsbetiae_contig178.5066.1 vs. uniprot
Match: A0A7S3HKW4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKW4_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.160e-41 Identity = 75/116 (64.66%), Postives = 93/116 (80.17%), Query Frame = 2 Query: 5 ISEDLRNALNAFLYRTGESTDKFMLVHVSNQPEQFD*AVNDRVNEMVPFGLPGREERLRMVNLYMKGYLLDPPGRVKAITVDGVEEV-----ADLTEGFSGREIAKLAIAWQAAAY 337 ISED+RNALNAFLYRTGE++ KFM+V+ SNQPEQFD A+NDR+++MV F LP +ER+RM++ YM +LL PP K ITV+GV+E A TEG+SGREI+KLAIAWQAAAY Sbjct: 227 ISEDMRNALNAFLYRTGEASYKFMIVYASNQPEQFDWAINDRIDDMVEFRLPSFDERVRMISQYMDSFLLHPPAGSKTITVEGVDEALIRSFASATEGYSGREISKLAIAWQAAAY 342
BLAST of mRNA_L-elsbetiae_contig178.5066.1 vs. uniprot
Match: A0A7S2V1G8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1G8_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.240e-41 Identity = 82/141 (58.16%), Postives = 97/141 (68.79%), Query Frame = 2 Query: 5 ISEDLRNALNAFLYRTGESTDKFMLVHVSNQPEQFD*AVNDRVNEMVPFGLPGREERLRMVNLYMKGYLLD----------------PPGRVKA---------ITVDGVEE-----VADLTEGFSGREIAKLAIAWQAAAY 337 ISEDLRNALNAFLYRTGE+TD+FM+V+ SNQPEQFD A+NDR++EMV F LPG EER RM+ Y++ YLLD P G+ + +TVDG+EE AD TEGFSGREI+KLAIAWQAAAY Sbjct: 17 ISEDLRNALNAFLYRTGEATDRFMVVYASNQPEQFDDAINDRIDEMVHFKLPGLEERQRMLTHYLRHYLLDGHHHGEDIFDQKTDGKPAGKSVSGFFGAAPTQVTVDGIEERHIRFAADRTEGFSGREISKLAIAWQAAAY 157
BLAST of mRNA_L-elsbetiae_contig178.5066.1 vs. uniprot
Match: A0A7S2WW12_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW12_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.510e-41 Identity = 80/124 (64.52%), Postives = 93/124 (75.00%), Query Frame = 2 Query: 5 ISEDLRNALNAFLYRTGESTDKFMLVHVSNQPEQFD*AVNDRVNEMVPFGLPGREERLRMVNLYMKGYLLDP--------PGRVKAITVDGVEE-----VADLTEGFSGREIAKLAIAWQAAAY 337 +SEDLRNALNAFLYRTGE T+KFMLV+ SNQPEQFD A+NDR++EMV F LP +EER+RM+ LYM YL P K I V+GVE+ +AD TEGFSGREI+KLAIAWQAAAY Sbjct: 86 MSEDLRNALNAFLYRTGEPTNKFMLVYASNQPEQFDWAINDRIDEMVEFALPSKEERVRMIQLYMDKYLYRSGEGGGFFSPASTK-ILVNGVEDSNIESIADRTEGFSGREISKLAIAWQAAAY 208
BLAST of mRNA_L-elsbetiae_contig178.5066.1 vs. uniprot
Match: A0A7S2B508_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B508_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.610e-40 Identity = 74/116 (63.79%), Postives = 90/116 (77.59%), Query Frame = 2 Query: 5 ISEDLRNALNAFLYRTGESTDKFMLVHVSNQPEQFD*AVNDRVNEMVPFGLPGREERLRMVNLYMKGYLLDPPGRVKAITVDGVEE-----VADLTEGFSGREIAKLAIAWQAAAY 337 ISED+RNALNAFLYRTGE++DKFM+V+ SNQPEQFD A++DR++EMV F LP +ERLRM+ YM LL + IT++G+ E VAD TEGFSGREI KLA+AWQAAAY Sbjct: 3 ISEDMRNALNAFLYRTGEASDKFMVVYASNQPEQFDGAISDRIDEMVEFSLPNEQERLRMIVHYMDK-LLSAKTNAQTITIEGITEDLVLGVADKTEGFSGREINKLAVAWQAAAY 117
BLAST of mRNA_L-elsbetiae_contig178.5066.1 vs. uniprot
Match: A0A4D9D134_9STRA (AAA domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D134_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.930e-40 Identity = 78/117 (66.67%), Postives = 97/117 (82.91%), Query Frame = 2 Query: 5 ISEDLRNALNAFLYRTGESTDKFMLVHVSNQPEQFD*AVNDRVNEMVPFGLPGREERLRMVNLYMKGYLLDPPG-RVKAITVDGV--EEV---ADLTEGFSGREIAKLAIAWQAAAY 337 +SE+LRNALNAFLYRTGE++DKFM+V SNQPEQFD A+NDR++EMV F LPG EERL MV +Y++ Y+L+PP + + ITV+G+ EEV A +T GFSGREI+KLAIAWQAAAY Sbjct: 425 MSEELRNALNAFLYRTGEASDKFMVVFASNQPEQFDWAINDRIDEMVDFNLPGEEERLEMVTIYLEKYVLNPPSTKARPITVEGIGEEEVKYAAKVTVGFSGREISKLAIAWQAAAY 541
BLAST of mRNA_L-elsbetiae_contig178.5066.1 vs. uniprot
Match: A0A836C9L2_9STRA (AAA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L2_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.800e-39 Identity = 77/116 (66.38%), Postives = 90/116 (77.59%), Query Frame = 2 Query: 5 ISEDLRNALNAFLYRTGESTDKFMLVHVSNQPEQFD*AVNDRVNEMVPFGLPGREERLRMVNLYMKGYLLDPPGRVKAITVDGVEE-----VADLTEGFSGREIAKLAIAWQAAAY 337 ISED+RNALNAFLYRTGE+TD+FM+V+ SNQPEQFD A+NDR++E+VPF LPG EER RM++ YM YLL+ I GVEE A TEGFSGREI+KLAIAWQAAAY Sbjct: 389 ISEDMRNALNAFLYRTGEATDRFMVVYASNQPEQFDDAINDRIDELVPFDLPGVEERRRMLDSYMLKYLLEAHAARSGIAALGVEEHHMAAAAAATEGFSGREISKLAIAWQAAAY 504
BLAST of mRNA_L-elsbetiae_contig178.5066.1 vs. uniprot
Match: A0A7S2GXT8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GXT8_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.030e-38 Identity = 71/117 (60.68%), Postives = 86/117 (73.50%), Query Frame = 2 Query: 5 ISEDLRNALNAFLYRTGESTDKFMLVHVSNQPEQFD*AVNDRVNEMVPFGLPGREERLRMVNLYMKGYLLDPPGR-VKAITV-----DGVEEVADLTEGFSGREIAKLAIAWQAAAY 337 ISED RNALNAFLYRTG + +FM+V+ SNQP QFD A+ DR++EMV FGLPG ER M+ Y++ YL++PPGR K +T D +E V TEGFSGR I+KLAIAWQAAAY Sbjct: 50 ISEDQRNALNAFLYRTGTESSQFMMVYASNQPSQFDEAIMDRIDEMVEFGLPGEHERRTMIAQYIEKYLINPPGRWTKKVTTVDIGDDEIERVVHQTEGFSGRAISKLAIAWQAAAY 166 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig178.5066.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig178.5066.1 >prot_L-elsbetiae_contig178.5066.1 ID=prot_L-elsbetiae_contig178.5066.1|Name=mRNA_L-elsbetiae_contig178.5066.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=113bp DHQRGPAQRPERLPLPHGRVHGQVYAGARVEPAGAVRLGGKRPGQRDGALback to top mRNA from alignment at L-elsbetiae_contig178:6658..8680+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig178.5066.1 ID=mRNA_L-elsbetiae_contig178.5066.1|Name=mRNA_L-elsbetiae_contig178.5066.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2023bp|location=Sequence derived from alignment at L-elsbetiae_contig178:6658..8680+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig178:6658..8680+ >mRNA_L-elsbetiae_contig178.5066.1 ID=mRNA_L-elsbetiae_contig178.5066.1|Name=mRNA_L-elsbetiae_contig178.5066.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=678bp|location=Sequence derived from alignment at L-elsbetiae_contig178:6658..8680+ (Laminarionema elsbetiae ELsaHSoW15)back to top |