mRNA_L-elsbetiae_contig17461.4905.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig17461.4905.1
Unique NamemRNA_L-elsbetiae_contig17461.4905.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: A0A6H5JJ59_9PHAE (RPAP3_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ59_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 9.820e-76
Identity = 154/294 (52.38%), Postives = 187/294 (63.61%), Query Frame = 1
Query:   43 MASRGNMEALHLETSKLHLELSAALKEDVSRKKTDEMKKRAIHTAANY---DEFRHMVSCAQLTPVTRKEMEMLSDQKRGWQGRSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLICGEFLAQPAGHQSDSSA-EASTHQPGDGKEGSVVGS-ARPCNGKIPLDEDGARFCMEWLWALSRTGRFAVNILFLEEKEKLELACLFDLITAAFQENGDEGTGRVHSLRKAYAV 909
            MASR     LHLETS LHLELSAALK      + D   ++  H+  +     +   +V  A+     RKEMEMLSD KRGWQGR GGV P T  +G  GR+K  R T++S  T + GGAKAG P+RAP+D++QFQRDWRRRCRT+  RR+YLR++ P     LFRVEMEPD+LGQV+S++C EF  QP    + + A + +  + G    G   GS A   NG    DE GAR C+EWL ALSRTGRFAVNILFL + EK  LA  FDL TA F   GDE    + SLRKAYAV
Sbjct:    1 MASRQGDGTLHLETSALHLELSAALKARGCEPEEDGRDEKTSHSYGSKLRRIQAHGLVRSAKPCHGVRKEMEMLSDPKRGWQGRVGGVAPTTNVSGRIGRQKAPRRTQRSVDTALRGGAKAG-PLRAPKDHAQFQRDWRRRCRTNGERRDYLRLVGPKNASALFRVEMEPDVLGQVISVVCEEFPFQPQRIDAATPATQENEERSGAPTRGDAAGSTAITANGNASADEAGARLCLEWLRALSRTGRFAVNILFLADNEKQALARAFDLTTAVF---GDE---EISSLRKAYAV 287          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: D7G465_ECTSI (RPAP3_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G465_ECTSI)

HSP 1 Score: 228 bits (581), Expect = 1.230e-70
Identity = 133/231 (57.58%), Postives = 158/231 (68.40%), Query Frame = 1
Query:  244 MEMLSDQKRGWQGRSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLICGEF--------LAQPAGHQSDSSAEASTHQPGDGKEGSVVGSA-RPCNGKIPLDEDGARFCMEWLWALSRTGRFAVNILFLEEKEKLELACLFDLITAAFQENGDEGTGRVHSLRKAYAV 909
            MEMLS  KRGWQGR GGV P TK +GS+GR+K  R T++S  T I GGAKAG P+RAP+D++QFQRDWRRRC T+  RR+YLR+I P  +  LFRVEMEPD+LGQVLS++C EF         A PA  +++  + A T        G   GSA    NG    D+ GARFC+EWLWALSRTGRFAVNILFL +KEK ELA  FDLI+A     GDE    + SLRKAYAV
Sbjct:    1 MEMLSVPKRGWQGRVGGVAPTTKVSGSTGRQKAPRRTQRSVDTAISGGAKAG-PLRAPKDHAQFQRDWRRRCCTNGERRDYLRLIGPKNVSALFRVEMEPDVLGQVLSVVCQEFPLHPQRLDTAMPATPENEERSGAPTR-------GDAGGSAAETANGSASADKAGARFCVEWLWALSRTGRFAVNILFLADKEKQELARAFDLISAVL---GDEDDEEISSLRKAYAV 220          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: A0A7S4DL22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL22_HETAK)

HSP 1 Score: 117 bits (294), Expect = 2.380e-28
Identity = 69/167 (41.32%), Postives = 101/167 (60.48%), Query Frame = 1
Query:   76 LETSKLHLELSAALKEDVSRKKTDEMKKRAIHTAANYDEFRHMVSCAQLTPVTRKEMEMLSDQKRGWQG-RSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLI 573
            L T KL  EL   L++D + ++TD+MKKRAIH A  YDEFR+MV CA   PVTRKE+E LS   +GWQ  R+   +P T          +AR  +K+   +I    KA   +  P++  +F+RDWRR+C TD  + +YLR++ P +L  LF  +++  +LGQ+L  +
Sbjct:   12 LNTKKLQKELIQGLEDDRNYQRTDDMKKRAIHVAGTYDEFRNMVLCANQQPVTRKELESLSKPSKGWQNSRTQSGLPGTS---------SARAKKKTGQGEI----KASKKLEVPKNSVEFERDWRRKCNTDLKKIKYLRLVGPRRLAALFAGDLDAALLGQLLGAL 165          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: A0A7S2REI2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2REI2_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.240e-27
Identity = 89/258 (34.50%), Postives = 125/258 (48.45%), Query Frame = 1
Query:  100 ELSAALKEDVSRKKTDEMKKRAIHTAANYDEFRHMVSCAQLTPVTRKEMEMLSDQKRGWQGRSGGVVPATKKTGSSGRKK--TARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLICGEFLAQPAGHQSDSSAEASTHQPGDGKEGSVVGSARPCNGKIPLDEDGARFCMEWLWALSRTGRFAVNILFLEEKEKLELACLFDLITAAFQENGDE 867
            ELS AL+ED     TDE KKR I TAA+YDEFRH+V+CA L  ++R E+E LS +K+GW        PA++      R++   ARG     S           PV+ P    +F+RDW+R CR+ D R  YL + +PD LP LF  +M+  ++ +V+S  C  F A  AG ++D                             P D     F +  L AL+ TGRF +N  FL  ++   +    D   A+ Q+  DE
Sbjct:   53 ELSMALEEDRKHHVTDEAKKRHITTAASYDEFRHLVACADLKRLSRSEIESLSQKKKGW----ARPAPASQAGARPSRRRGNKARGAAVPISQF---------PVQPPPSRMEFERDWKRHCRSHDDRVRYLMLCTPDSLPGLFHADMDVTLMSEVISA-CAHF-ASAAGSEAD-----------------------------PSDLSRGDFVLATLNALANTGRFTLNKSFLSAEDAQNIRTCCDCARASGQDTADE 266          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: A0A7S2C1V5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1V5_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.230e-22
Identity = 87/287 (30.31%), Postives = 142/287 (49.48%), Query Frame = 1
Query:   76 LETSKLHLELSAALKEDVSRKKTDEMKKRAIHTAANYDEFRHMVSCAQLTPVTRKEMEMLSDQKRGWQGRSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLICGEFLAQPAGHQSDSSAEASTHQ-----------PGDGKEGSVVGSARPCNGKIPLDEDGARFCMEWLWALSRTGRFAVNILFLEEKEKLELACLFDLITAAFQENGDEGTGRVHSLRKAY 903
            L T+ +  EL+ +LKED +   TDE KK+ I   A YDEFRHMV+ A    V+R EME L    +GW+ ++  +    KK+  + R++T +G++K              P   P    QF+RDWRR C+   A+  YLR+   + +  +F+ E++  +LG++L+ + G      AG  ++   + +  +                E S   +AR       L+E    F +  L AL +TGRF++N+ FLE+K+K  +A + + +     E G E  G + + R  Y
Sbjct:   77 LNTTMIQKELADSLKEDRNYHNTDEAKKKYITKCATYDEFRHMVASADQKRVSRAEMETLGKTTKGWEQKTK-LTTGAKKSARAKRQQT-KGSKKLSQEF---------PTTPPATSMQFERDWRRHCKELGAQLRYLRLCGSETVLAVFKTEIDAALLGKLLAALAGRAAELRAGGATEGGRDWAAAEVRXXXXXXXXXXXXXXEASAAEAAR-------LEEP--LFLLSILRALPQTGRFSLNVNFLEDKDKASVATVVEWLG----ELGVEDAGALEATRALY 339          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: A0A024UPP0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UPP0_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.900e-20
Identity = 66/174 (37.93%), Postives = 99/174 (56.90%), Query Frame = 1
Query:   79 ETSKLHLELSAALKEDVSRKKTDEMKKRAIHTAANYDEFRHMVSCAQLTPVTRKEMEMLSDQKRG----WQGRSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLICGEFL 588
            +T+ L  EL+ AL+ED   K TDEMKKRAIHTAA+YD+FR+ V CA L PV+ KE++ LS  +R     +Q ++  VV  TK                  S  + G   A  P   P    +F R WRR C T DA+ +YL++ +P++L  LF  E++ D++ Q+++ +  +F+
Sbjct:   10 DTAALQKELALALEEDRKYKLTDEMKKRAIHTAASYDDFRNFVLCADLKPVSSKELQNLSKSERKRNRMYQAKTA-VVDTTK------------------SKTLVGELDAAVP---PATSVEFLRTWRRSCVTQDAKYKYLQVTTPERLQKLFHAELDSDLMLQIVACLNAQFV 161          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: T0S406_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S406_SAPDV)

HSP 1 Score: 94.4 bits (233), Expect = 5.700e-19
Identity = 63/166 (37.95%), Postives = 90/166 (54.22%), Query Frame = 1
Query:   79 ETSKLHLELSAALKEDVSRKKTDEMKKRAIHTAANYDEFRHMVSCAQLTPVTRKEMEMLSDQKRGWQGRSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYS-QFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLI 573
            +T+ L  EL+ AL ED   K TDEMKKRAIHTAA+YDEF++ V CA L PV+ KE++ LS  +R                     ++     +KS S      A   G   AP   S +FQR W+R C TD A+ +YL   +P +L  LF+ E++ D+ G +++ +
Sbjct:   10 DTASLQKELAQALDEDRKYKATDEMKKRAIHTAASYDEFKNFVLCADLKPVSSKELQNLSKSER---------------------QRNRLYHKKSSSIKATRPATLTGADDAPPKSSVEFQRTWQRSCSTDAAKLQYLERTTPARLAKLFQAEIDADLFGSIVATL 154          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: A0A7S2C2K5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C2K5_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 9.630e-19
Identity = 78/264 (29.55%), Postives = 128/264 (48.48%), Query Frame = 1
Query:  145 DEMKKRAIHTAANYDEFRHMVSCAQLTPVTRKEMEMLSDQKRGWQGRSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLICGEFLAQPAGHQSDSSAEASTHQ-----------PGDGKEGSVVGSARPCNGKIPLDEDGARFCMEWLWALSRTGRFAVNILFLEEKEKLELACLFDLITAAFQENGDEGTGRVHSLRKAY 903
            DE KK+ I   A YDEFRHMV+ A    V+R EME L    +GW+ ++  +    KK+  + R++T +G++K              P   P    QF+RDWRR C+   A+  YLR+   + +  +F+ E++  +LG++L+ + G      AG  ++   + +  +                E S   +AR       L+E    F +  L AL +TGRF++N+ FLE+K+K  +A + + +     E G E  G + + R  Y
Sbjct:    5 DEAKKKYITKCATYDEFRHMVASADQKRVSRAEMETLGKTTKGWEQKTK-LTTGAKKSARAKRQQT-KGSKKLSQEF---------PTTPPATSMQFERDWRRHCKELGAQLRYLRLCGSETVLAVFKTEIDAALLGKLLAALAGRAAELRAGGATEGGRDWAAAEVRXXXXXXXXXXXXXXEASAAEAAR-------LEEP--LFLLSILRALPQTGRFSLNVNFLEDKDKASVATVVEWLG----ELGVEDAGALEATRALY 244          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: A0A6G0X454_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X454_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.360e-18
Identity = 64/173 (36.99%), Postives = 95/173 (54.91%), Query Frame = 1
Query:   79 ETSKLHLELSAALKEDVSRKKTDEMKKRAIHTAANYDEFRHMVSCAQLTPVTRKEMEMLS--DQKRG--WQGRSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLICGEF 585
            +T+ L  EL+ AL+ED   KKTDEMKKRAIHTAA+YDEFR+ V CA L PV+ K+++ LS  D++R   +Q +    + A+       R KT    +K+   D  G                F R WRR C T   + +Y+R+ +P +   +F  E+E D++ Q++  +  EF
Sbjct:   10 DTAALQKELAIALEEDRKYKKTDEMKKRAIHTAASYDEFRNFVLCADLKPVSSKDLQNLSKSDRRRNRMYQTKPNNPLDAS-------RAKTLSACKKTTPPDTSG---------------DFLRTWRRSCPTHRDKYQYMRLTTPARFRKMFASELEADLMIQLIECMSEEF 160          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: A0A1V9Z2T7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z2T7_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 8.730e-18
Identity = 62/165 (37.58%), Postives = 89/165 (53.94%), Query Frame = 1
Query:   79 ETSKLHLELSAALKEDVSRKKTDEMKKRAIHTAANYDEFRHMVSCAQLTPVTRKEMEMLSDQKRGWQGRSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLI 573
            +T+ L  EL  AL+ED   K TDEMKKRAIHTA++YDEF++ V CA L PV+ KE++ LS  +R              K  +S R  T   T  +DS             R P+   +F R W+R C +D  + EYL + SP +L  LF+ EM+ D+   +++ +
Sbjct:   10 DTASLQKELVQALEEDRKYKATDEMKKRAIHTASSYDEFKNFVLCADLKPVSSKELQNLSKSERQRN-------RLYHKKAASVRATTGTLTGSNDSR------------RPPKSSVEFLRTWKRSCTSDAGKYEYLVLTSPARLGKLFQAEMDADLFADIVACL 155          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJ59_9PHAE9.820e-7652.38RPAP3_C domain-containing protein n=1 Tax=Ectocarp... [more]
D7G465_ECTSI1.230e-7057.58RPAP3_C domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S4DL22_HETAK2.380e-2841.32Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2REI2_9STRA1.240e-2734.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2C1V5_9STRA2.230e-2230.31Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A024UPP0_9STRA3.900e-2037.93Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
T0S406_SAPDV5.700e-1937.95Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A7S2C2K5_9STRA9.630e-1929.55Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6G0X454_9STRA1.360e-1836.99Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9Z2T7_9STRA8.730e-1837.58Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17461contigL-elsbetiae_contig17461:472..3206 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score107.5
Seed ortholog evalue1.1e-20
Seed eggNOG ortholog42099.EPrPV00000014032
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005858,GO:0005875,GO:0005929,GO:0005930,GO:0015630,GO:0030286,GO:0032838,GO:0032991,GO:0036157,GO:0042802,GO:0042803,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0046983,GO:0097014,GO:0099568,GO:0120025,GO:0120038,GO:1902494
EggNOG free text desc.PR46b. Source PGD
EggNOG OGs1MF2W@121069,2CFN8@1,2S3J2@2759
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Exons3
Model size1015
Cds size870
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17461.4905.1prot_L-elsbetiae_contig17461.4905.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig17461 514..3103 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815727.4653437-UTR-L-elsbetiae_contig17461:471..5131622815727.4653437-UTR-L-elsbetiae_contig17461:471..513Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig17461 472..513 +
1691683063.5295875-UTR-L-elsbetiae_contig17461:471..5131691683063.5295875-UTR-L-elsbetiae_contig17461:471..513Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig17461 472..513 +
1622815727.5187454-UTR-L-elsbetiae_contig17461:3103..32061622815727.5187454-UTR-L-elsbetiae_contig17461:3103..3206Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig17461 3104..3206 +
1691683063.5756023-UTR-L-elsbetiae_contig17461:3103..32061691683063.5756023-UTR-L-elsbetiae_contig17461:3103..3206Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig17461 3104..3206 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815727.479156-CDS-L-elsbetiae_contig17461:513..5911622815727.479156-CDS-L-elsbetiae_contig17461:513..591Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17461 514..591 +
1691683063.5398474-CDS-L-elsbetiae_contig17461:513..5911691683063.5398474-CDS-L-elsbetiae_contig17461:513..591Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17461 514..591 +
1622815727.490908-CDS-L-elsbetiae_contig17461:2126..22391622815727.490908-CDS-L-elsbetiae_contig17461:2126..2239Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17461 2127..2239 +
1691683063.5493193-CDS-L-elsbetiae_contig17461:2126..22391691683063.5493193-CDS-L-elsbetiae_contig17461:2126..2239Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17461 2127..2239 +
1622815727.5074484-CDS-L-elsbetiae_contig17461:2424..31031622815727.5074484-CDS-L-elsbetiae_contig17461:2424..3103Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17461 2425..3103 +
1691683063.5589905-CDS-L-elsbetiae_contig17461:2424..31031691683063.5589905-CDS-L-elsbetiae_contig17461:2424..3103Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17461 2425..3103 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig17461.4905.1

>prot_L-elsbetiae_contig17461.4905.1 ID=prot_L-elsbetiae_contig17461.4905.1|Name=mRNA_L-elsbetiae_contig17461.4905.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=290bp
MASRGNMEALHLETSKLHLELSAALKEDVSRKKTDEMKKRAIHTAANYDE
FRHMVSCAQLTPVTRKEMEMLSDQKRGWQGRSGGVVPATKKTGSSGRKKT
ARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLR
MISPDKLPVLFRVEMEPDILGQVLSLICGEFLAQPAGHQSDSSAEASTHQ
PGDGKEGSVVGSARPCNGKIPLDEDGARFCMEWLWALSRTGRFAVNILFL
EEKEKLELACLFDLITAAFQENGDEGTGRVHSLRKAYAV*
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mRNA from alignment at L-elsbetiae_contig17461:472..3206+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig17461.4905.1 ID=mRNA_L-elsbetiae_contig17461.4905.1|Name=mRNA_L-elsbetiae_contig17461.4905.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2735bp|location=Sequence derived from alignment at L-elsbetiae_contig17461:472..3206+ (Laminarionema elsbetiae ELsaHSoW15)
CTGAGCCGCCGGCATACCCGCCGTATCTTACCTAGAGAGGGGATGGCATC GAGAGGAAACATGGAAGCCCTTCATTTGGAAACTTCCAAGCTGCACCTAG AGCTATCTGCGGCTCTCAAGGCAAGTTGTGGTGGTGTGCGCGATGCTCCC GAATTTTCGGGATACTGTTGTGCGAGGATCCGTGACGTCTATTGACCCCA ACGATGCTTCAGTCCCGTTCAGCATGACATTGCATCACAAGAAAAAACGT GGCCTTCCTGGGGAATCTTGTTGTTTTCGAGCAACCCCAACAAAAATCAA ATGGTTTAGAACATCGAGATTATTTCCGCGCCTGGTTTACTTACATCTAG GTAGGTAATACTAGATACATAGTCTAGAGTGTATTTAGGGAGTAGTCTAG ATATCTGTTGTTGATGTCTTCACATTTAAAAACCGTTCCGATCTCTCCAA AGATAGACTACAGTACATCCACCCTTGGCCGCACAAATCCAAAACGCTTG GTTCGGTCGATTCCCGTGGTCACAGGCTTACTTGCCCGAAAGAGGGTATA CTGAAAAATAAAATGAACCCGTTTGATTCAATGAAGGACCAGCAAAGCAA AAAACAATAAGAACACAGATCAGGCACAGATAGTCCGGAGCCCCCCGCTC CCCCTCTACACGCTATGCCAACATCCCCTGAGGAATACACCCCCTGGTTC TATCTTGGTGCCCCAACAAAGCCGAGGTGTTCCGTGCTGGGTTCTCTGGT CTATCCTAGACTATTTAGAAGGGTACATAGCTGTAGTAACATGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTGTCCTTCCCATTTATTTTGGCGACAGTC CCCCCAAGTGGAGACGTGTACTACACCTTGCGGTGTACTTAGAGGTACTA CACTTTGCAGTGCATTTGTCTGTACAACCAGAACCAGCCGGGGTCACACA GGAGGAGGTGAACACTGGGGCTTTTTCTTCTTTTATATTTTCTTTTTTTG CCCCCCCTTCCTCCTGCGGTTCTTGCCTTGGGTTTTATCGCGAGAAGGGT TCAGCTGTCCCTTTCCCTCGTCAACGTGATTACGTCGAAGTTTGGTACAT CTAGACTTATGGTATGTAGTACAGCTGTACATTCCAGATGACGTTTCACA ATAAATGTTTTCTTCTTCACATGTTTTTTCTTCTTCACATTTATTTTCAG TGCTCGATGGGCTCCTTGCCACGAAGGCATCTTGCCAGAATACTGAACCG TGGTCACACAGAAGGGTTCCTCTCGGCGAGCCCCCCACTCCCACTTTCTG CGGTGCTTGCCTAAGATTTTTGTCGCGAGAAGGGTTCAGCCGTCCCTTTC CCTCGTCGACTAAAGCGAGAGAATAAAAAATACCGATGTACATACAGCAC GACATGGACGTATTTGTTGTCAAAGGGGTGGCGTGTTCTCCCACCTTGTC ATTCAAGACACGATTGCACTCAGGCGCACGCCGGCAGGTGAACGCAGCTA ATTTAGGCGAGCCGATGCTCCTAGACTATGCAGTTGTGTTCCTCGTGTAC AATGTGCATGCACAGGCTTTCGCTTGCATCCAATCGTGACACCGCAACAC CTGCCGCGTGGCGTCGTTGTGCGTGTGTGATTGATATGTTCTGCCTGATA TATAGGAGGACGTCAGCCGGAAGAAGACAGATGAGATGAAGAAACGAGCC ATTCACACAGCCGCAAACTATGACGAATTCAGGCACATGGTGTCCTGCGC TCAGCTAACTCCCGTCACGTAAGATGCCCACACGGGGTTGGCATATTCTT ATGTACGGGTGCAGTCTGGCGAGTGCACAATATCTCCCCATCGATACCGG GCCTTGCCGATGAAGTTGTGGTGCAACGGCCCTCACATTTCTGCTCGTCA TGACACCGCACGAACACACCTCCATAAATACTCTCTCCCCCTTGCATCTC CAGGCGCAAAGAGATGGAAATGCTTTCCGACCAAAAACGAGGCTGGCAAG GGCGATCGGGTGGCGTAGTCCCTGCCACGAAGAAAACAGGTAGCAGTGGA CGGAAAAAGACCGCCAGAGGCACACGAAAGTCTGACAGTACTGACATCGG TGGTGGGGCGAAGGCAGGTGGCCCTGTACGTGCGCCTCGAGACTATTCCC AGTTTCAGCGAGACTGGCGACGGCGATGCCGTACCGACGATGCGCGGCGC GAATACCTTCGTATGATTAGCCCCGATAAACTCCCGGTCTTATTCCGTGT TGAGATGGAACCCGACATCCTCGGGCAGGTGCTATCGCTCATCTGTGGCG AGTTTCTGGCGCAACCGGCGGGACACCAGAGCGACAGCAGTGCGGAGGCG TCTACGCATCAGCCTGGCGACGGAAAGGAGGGCTCGGTTGTTGGATCCGC ACGGCCTTGCAATGGAAAAATTCCTCTCGACGAAGATGGAGCAAGGTTCT GCATGGAGTGGCTGTGGGCGCTGTCCAGGACAGGCCGGTTTGCAGTCAAC ATTCTGTTCCTGGAGGAGAAGGAAAAACTTGAATTGGCTTGCTTGTTCGA TCTGATCACCGCAGCTTTCCAAGAAAACGGCGACGAAGGCACTGGAAGAG TTCACTCGCTGCGGAAGGCGTACGCGGTATAAATAGCTCGTTGTGTGTTG CAGCTAGAATGTAGCGAGATACTTTTTTTACCGCTCGGGGAAACAGGGGT ACACTCTGAAATCGCACAATAGAGGTAACTAATAT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig17461:472..3206+

>mRNA_L-elsbetiae_contig17461.4905.1 ID=mRNA_L-elsbetiae_contig17461.4905.1|Name=mRNA_L-elsbetiae_contig17461.4905.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1740bp|location=Sequence derived from alignment at L-elsbetiae_contig17461:472..3206+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCATCGAGAGGAAACATGGAAGCCCTTCATTTGGAAACTTCCAAGCT
GCACCTAGAGCTATCTGCGGCTCTCAAGATGGCATCGAGAGGAAACATGG
AAGCCCTTCATTTGGAAACTTCCAAGCTGCACCTAGAGCTATCTGCGGCT
CTCAAGGAGGACGTCAGCCGGAAGAAGACAGATGAGATGAAGAAACGAGC
CATTCACACAGCCGCAAACTATGACGAATTCAGGCACATGGTGTCCTGCG
CTCAGCTAACTCCCGTCACGAGGACGTCAGCCGGAAGAAGACAGATGAGA
TGAAGAAACGAGCCATTCACACAGCCGCAAACTATGACGAATTCAGGCAC
ATGGTGTCCTGCGCTCAGCTAACTCCCGTCACGCGCAAAGAGATGGAAAT
GCTTTCCGACCAAAAACGAGGCTGGCAAGGGCGATCGGGTGGCGTAGTCC
CTGCCACGAAGAAAACAGGTAGCAGTGGACGGAAAAAGACCGCCAGAGGC
ACACGAAAGTCTGACAGTACTGACATCGGTGGTGGGGCGAAGGCAGGTGG
CCCTGTACGTGCGCCTCGAGACTATTCCCAGTTTCAGCGAGACTGGCGAC
GGCGATGCCGTACCGACGATGCGCGGCGCGAATACCTTCGTATGATTAGC
CCCGATAAACTCCCGGTCTTATTCCGTGTTGAGATGGAACCCGACATCCT
CGGGCAGGTGCTATCGCTCATCTGTGGCGAGTTTCTGGCGCAACCGGCGG
GACACCAGAGCGACAGCAGTGCGGAGGCGTCTACGCATCAGCCTGGCGAC
GGAAAGGAGGGCTCGGTTGTTGGATCCGCACGGCCTTGCAATGGAAAAAT
TCCTCTCGACGAAGATGGAGCAAGGTTCTGCATGGAGTGGCTGTGGGCGC
TGTCCAGGACAGGCCGGTTTGCAGTCAACATTCTGTTCCTGGAGGAGAAG
GAAAAACTTGAATTGGCTTGCTTGTTCGATCTGATCACCGCAGCTTTCCA
AGAAAACGGCGACGAAGGCACTGGAAGAGTTCACTCGCTGCGGAAGGCGT
ACGCGGTATAAGCGCAAAGAGATGGAAATGCTTTCCGACCAAAAACGAGG
CTGGCAAGGGCGATCGGGTGGCGTAGTCCCTGCCACGAAGAAAACAGGTA
GCAGTGGACGGAAAAAGACCGCCAGAGGCACACGAAAGTCTGACAGTACT
GACATCGGTGGTGGGGCGAAGGCAGGTGGCCCTGTACGTGCGCCTCGAGA
CTATTCCCAGTTTCAGCGAGACTGGCGACGGCGATGCCGTACCGACGATG
CGCGGCGCGAATACCTTCGTATGATTAGCCCCGATAAACTCCCGGTCTTA
TTCCGTGTTGAGATGGAACCCGACATCCTCGGGCAGGTGCTATCGCTCAT
CTGTGGCGAGTTTCTGGCGCAACCGGCGGGACACCAGAGCGACAGCAGTG
CGGAGGCGTCTACGCATCAGCCTGGCGACGGAAAGGAGGGCTCGGTTGTT
GGATCCGCACGGCCTTGCAATGGAAAAATTCCTCTCGACGAAGATGGAGC
AAGGTTCTGCATGGAGTGGCTGTGGGCGCTGTCCAGGACAGGCCGGTTTG
CAGTCAACATTCTGTTCCTGGAGGAGAAGGAAAAACTTGAATTGGCTTGC
TTGTTCGATCTGATCACCGCAGCTTTCCAAGAAAACGGCGACGAAGGCAC
TGGAAGAGTTCACTCGCTGCGGAAGGCGTACGCGGTATAA
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