prot_L-elsbetiae_contig17461.4905.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17461.4905.1
Unique Nameprot_L-elsbetiae_contig17461.4905.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length290
Homology
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: A0A6H5JJ59_9PHAE (RPAP3_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ59_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 6.770e-77
Identity = 154/294 (52.38%), Postives = 187/294 (63.61%), Query Frame = 0
Query:    1 MASRGNMEALHLETSKLHLELSAALKEDVSRKKTDEMKKRAIHTAANY---DEFRHMVSCAQLTPVTRKEMEMLSDQKRGWQGRSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLICGEFLAQPAGHQSDSSA-EASTHQPGDGKEGSVVGS-ARPCNGKIPLDEDGARFCMEWLWALSRTGRFAVNILFLEEKEKLELACLFDLITAAFQENGDEGTGRVHSLRKAYAV 289
            MASR     LHLETS LHLELSAALK      + D   ++  H+  +     +   +V  A+     RKEMEMLSD KRGWQGR GGV P T  +G  GR+K  R T++S  T + GGAKAG P+RAP+D++QFQRDWRRRCRT+  RR+YLR++ P     LFRVEMEPD+LGQV+S++C EF  QP    + + A + +  + G    G   GS A   NG    DE GAR C+EWL ALSRTGRFAVNILFL + EK  LA  FDL TA F   GDE    + SLRKAYAV
Sbjct:    1 MASRQGDGTLHLETSALHLELSAALKARGCEPEEDGRDEKTSHSYGSKLRRIQAHGLVRSAKPCHGVRKEMEMLSDPKRGWQGRVGGVAPTTNVSGRIGRQKAPRRTQRSVDTALRGGAKAG-PLRAPKDHAQFQRDWRRRCRTNGERRDYLRLVGPKNASALFRVEMEPDVLGQVISVVCEEFPFQPQRIDAATPATQENEERSGAPTRGDAAGSTAITANGNASADEAGARLCLEWLRALSRTGRFAVNILFLADNEKQALARAFDLTTAVF---GDE---EISSLRKAYAV 287          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: D7G465_ECTSI (RPAP3_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G465_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 8.770e-72
Identity = 133/231 (57.58%), Postives = 158/231 (68.40%), Query Frame = 0
Query:   68 MEMLSDQKRGWQGRSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLICGEF--------LAQPAGHQSDSSAEASTHQPGDGKEGSVVGSA-RPCNGKIPLDEDGARFCMEWLWALSRTGRFAVNILFLEEKEKLELACLFDLITAAFQENGDEGTGRVHSLRKAYAV 289
            MEMLS  KRGWQGR GGV P TK +GS+GR+K  R T++S  T I GGAKAG P+RAP+D++QFQRDWRRRC T+  RR+YLR+I P  +  LFRVEMEPD+LGQVLS++C EF         A PA  +++  + A T        G   GSA    NG    D+ GARFC+EWLWALSRTGRFAVNILFL +KEK ELA  FDLI+A     GDE    + SLRKAYAV
Sbjct:    1 MEMLSVPKRGWQGRVGGVAPTTKVSGSTGRQKAPRRTQRSVDTAISGGAKAG-PLRAPKDHAQFQRDWRRRCCTNGERRDYLRLIGPKNVSALFRVEMEPDVLGQVLSVVCQEFPLHPQRLDTAMPATPENEERSGAPTR-------GDAGGSAAETANGSASADKAGARFCVEWLWALSRTGRFAVNILFLADKEKQELARAFDLISAVL---GDEDDEEISSLRKAYAV 220          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: A0A7S4DL22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL22_HETAK)

HSP 1 Score: 117 bits (293), Expect = 1.140e-28
Identity = 69/167 (41.32%), Postives = 101/167 (60.48%), Query Frame = 0
Query:   12 LETSKLHLELSAALKEDVSRKKTDEMKKRAIHTAANYDEFRHMVSCAQLTPVTRKEMEMLSDQKRGWQG-RSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLI 177
            L T KL  EL   L++D + ++TD+MKKRAIH A  YDEFR+MV CA   PVTRKE+E LS   +GWQ  R+   +P T          +AR  +K+   +I    KA   +  P++  +F+RDWRR+C TD  + +YLR++ P +L  LF  +++  +LGQ+L  +
Sbjct:   12 LNTKKLQKELIQGLEDDRNYQRTDDMKKRAIHVAGTYDEFRNMVLCANQQPVTRKELESLSKPSKGWQNSRTQSGLPGTS---------SARAKKKTGQGEI----KASKKLEVPKNSVEFERDWRRKCNTDLKKIKYLRLVGPRRLAALFAGDLDAALLGQLLGAL 165          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: A0A7S2REI2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2REI2_9STRA)

HSP 1 Score: 118 bits (296), Expect = 4.170e-28
Identity = 89/258 (34.50%), Postives = 125/258 (48.45%), Query Frame = 0
Query:   20 ELSAALKEDVSRKKTDEMKKRAIHTAANYDEFRHMVSCAQLTPVTRKEMEMLSDQKRGWQGRSGGVVPATKKTGSSGRKK--TARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLICGEFLAQPAGHQSDSSAEASTHQPGDGKEGSVVGSARPCNGKIPLDEDGARFCMEWLWALSRTGRFAVNILFLEEKEKLELACLFDLITAAFQENGDE 275
            ELS AL+ED     TDE KKR I TAA+YDEFRH+V+CA L  ++R E+E LS +K+GW        PA++      R++   ARG     S           PV+ P    +F+RDW+R CR+ D R  YL + +PD LP LF  +M+  ++ +V+S  C  F A  AG ++D                             P D     F +  L AL+ TGRF +N  FL  ++   +    D   A+ Q+  DE
Sbjct:   53 ELSMALEEDRKHHVTDEAKKRHITTAASYDEFRHLVACADLKRLSRSEIESLSQKKKGW----ARPAPASQAGARPSRRRGNKARGAAVPISQF---------PVQPPPSRMEFERDWKRHCRSHDDRVRYLMLCTPDSLPGLFHADMDVTLMSEVISA-CAHF-ASAAGSEAD-----------------------------PSDLSRGDFVLATLNALANTGRFTLNKSFLSAEDAQNIRTCCDCARASGQDTADE 266          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: A0A7S2C1V5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1V5_9STRA)

HSP 1 Score: 106 bits (264), Expect = 6.090e-23
Identity = 87/287 (30.31%), Postives = 142/287 (49.48%), Query Frame = 0
Query:   12 LETSKLHLELSAALKEDVSRKKTDEMKKRAIHTAANYDEFRHMVSCAQLTPVTRKEMEMLSDQKRGWQGRSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLICGEFLAQPAGHQSDSSAEASTHQ-----------PGDGKEGSVVGSARPCNGKIPLDEDGARFCMEWLWALSRTGRFAVNILFLEEKEKLELACLFDLITAAFQENGDEGTGRVHSLRKAY 287
            L T+ +  EL+ +LKED +   TDE KK+ I   A YDEFRHMV+ A    V+R EME L    +GW+ ++  +    KK+  + R++T +G++K              P   P    QF+RDWRR C+   A+  YLR+   + +  +F+ E++  +LG++L+ + G      AG  ++   + +  +                E S   +AR       L+E    F +  L AL +TGRF++N+ FLE+K+K  +A + + +     E G E  G + + R  Y
Sbjct:   77 LNTTMIQKELADSLKEDRNYHNTDEAKKKYITKCATYDEFRHMVASADQKRVSRAEMETLGKTTKGWEQKTK-LTTGAKKSARAKRQQT-KGSKKLSQEF---------PTTPPATSMQFERDWRRHCKELGAQLRYLRLCGSETVLAVFKTEIDAALLGKLLAALAGRAAELRAGGATEGGRDWAAAEVRXXXXXXXXXXXXXXEASAAEAAR-------LEEP--LFLLSILRALPQTGRFSLNVNFLEDKDKASVATVVEWLG----ELGVEDAGALEATRALY 339          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: A0A024UPP0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UPP0_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.260e-20
Identity = 66/174 (37.93%), Postives = 99/174 (56.90%), Query Frame = 0
Query:   13 ETSKLHLELSAALKEDVSRKKTDEMKKRAIHTAANYDEFRHMVSCAQLTPVTRKEMEMLSDQKRG----WQGRSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLICGEFL 182
            +T+ L  EL+ AL+ED   K TDEMKKRAIHTAA+YD+FR+ V CA L PV+ KE++ LS  +R     +Q ++  VV  TK                  S  + G   A  P   P    +F R WRR C T DA+ +YL++ +P++L  LF  E++ D++ Q+++ +  +F+
Sbjct:   10 DTAALQKELALALEEDRKYKLTDEMKKRAIHTAASYDDFRNFVLCADLKPVSSKELQNLSKSERKRNRMYQAKTA-VVDTTK------------------SKTLVGELDAAVP---PATSVEFLRTWRRSCVTQDAKYKYLQVTTPERLQKLFHAELDSDLMLQIVACLNAQFV 161          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: A0A7S2C2K5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C2K5_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.180e-19
Identity = 78/264 (29.55%), Postives = 128/264 (48.48%), Query Frame = 0
Query:   35 DEMKKRAIHTAANYDEFRHMVSCAQLTPVTRKEMEMLSDQKRGWQGRSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLICGEFLAQPAGHQSDSSAEASTHQ-----------PGDGKEGSVVGSARPCNGKIPLDEDGARFCMEWLWALSRTGRFAVNILFLEEKEKLELACLFDLITAAFQENGDEGTGRVHSLRKAY 287
            DE KK+ I   A YDEFRHMV+ A    V+R EME L    +GW+ ++  +    KK+  + R++T +G++K              P   P    QF+RDWRR C+   A+  YLR+   + +  +F+ E++  +LG++L+ + G      AG  ++   + +  +                E S   +AR       L+E    F +  L AL +TGRF++N+ FLE+K+K  +A + + +     E G E  G + + R  Y
Sbjct:    5 DEAKKKYITKCATYDEFRHMVASADQKRVSRAEMETLGKTTKGWEQKTK-LTTGAKKSARAKRQQT-KGSKKLSQEF---------PTTPPATSMQFERDWRRHCKELGAQLRYLRLCGSETVLAVFKTEIDAALLGKLLAALAGRAAELRAGGATEGGRDWAAAEVRXXXXXXXXXXXXXXEASAAEAAR-------LEEP--LFLLSILRALPQTGRFSLNVNFLEDKDKASVATVVEWLG----ELGVEDAGALEATRALY 244          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: T0S406_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S406_SAPDV)

HSP 1 Score: 94.0 bits (232), Expect = 3.450e-19
Identity = 63/166 (37.95%), Postives = 90/166 (54.22%), Query Frame = 0
Query:   13 ETSKLHLELSAALKEDVSRKKTDEMKKRAIHTAANYDEFRHMVSCAQLTPVTRKEMEMLSDQKRGWQGRSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYS-QFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLI 177
            +T+ L  EL+ AL ED   K TDEMKKRAIHTAA+YDEF++ V CA L PV+ KE++ LS  +R                     ++     +KS S      A   G   AP   S +FQR W+R C TD A+ +YL   +P +L  LF+ E++ D+ G +++ +
Sbjct:   10 DTASLQKELAQALDEDRKYKATDEMKKRAIHTAASYDEFKNFVLCADLKPVSSKELQNLSKSER---------------------QRNRLYHKKSSSIKATRPATLTGADDAPPKSSVEFQRTWQRSCSTDAAKLQYLERTTPARLAKLFQAEIDADLFGSIVATL 154          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: A0A6G0X454_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X454_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 8.270e-19
Identity = 64/173 (36.99%), Postives = 95/173 (54.91%), Query Frame = 0
Query:   13 ETSKLHLELSAALKEDVSRKKTDEMKKRAIHTAANYDEFRHMVSCAQLTPVTRKEMEMLS--DQKRG--WQGRSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLICGEF 181
            +T+ L  EL+ AL+ED   KKTDEMKKRAIHTAA+YDEFR+ V CA L PV+ K+++ LS  D++R   +Q +    + A+       R KT    +K+   D  G                F R WRR C T   + +Y+R+ +P +   +F  E+E D++ Q++  +  EF
Sbjct:   10 DTAALQKELAIALEEDRKYKKTDEMKKRAIHTAASYDEFRNFVLCADLKPVSSKDLQNLSKSDRRRNRMYQTKPNNPLDAS-------RAKTLSACKKTTPPDTSG---------------DFLRTWRRSCPTHRDKYQYMRLTTPARFRKMFASELEADLMIQLIECMSEEF 160          
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Match: A0A1V9Z2T7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z2T7_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 5.470e-18
Identity = 62/165 (37.58%), Postives = 89/165 (53.94%), Query Frame = 0
Query:   13 ETSKLHLELSAALKEDVSRKKTDEMKKRAIHTAANYDEFRHMVSCAQLTPVTRKEMEMLSDQKRGWQGRSGGVVPATKKTGSSGRKKTARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLRMISPDKLPVLFRVEMEPDILGQVLSLI 177
            +T+ L  EL  AL+ED   K TDEMKKRAIHTA++YDEF++ V CA L PV+ KE++ LS  +R              K  +S R  T   T  +DS             R P+   +F R W+R C +D  + EYL + SP +L  LF+ EM+ D+   +++ +
Sbjct:   10 DTASLQKELVQALEEDRKYKATDEMKKRAIHTASSYDEFKNFVLCADLKPVSSKELQNLSKSERQRN-------RLYHKKAASVRATTGTLTGSNDSR------------RPPKSSVEFLRTWKRSCTSDAGKYEYLVLTSPARLGKLFQAEMDADLFADIVACL 155          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17461.4905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJ59_9PHAE6.770e-7752.38RPAP3_C domain-containing protein n=1 Tax=Ectocarp... [more]
D7G465_ECTSI8.770e-7257.58RPAP3_C domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S4DL22_HETAK1.140e-2841.32Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2REI2_9STRA4.170e-2834.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2C1V5_9STRA6.090e-2330.31Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A024UPP0_9STRA2.260e-2037.93Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A7S2C2K5_9STRA2.180e-1929.55Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
T0S406_SAPDV3.450e-1937.95Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A6G0X454_9STRA8.270e-1936.99Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9Z2T7_9STRA5.470e-1837.58Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025986RNA-polymerase II-associated protein 3-like, C-terminal domainPFAMPF13877RPAP3_Ccoord: 125..255
e-value: 1.4E-14
score: 54.4
IPR031733Dynein attachment factor, N-terminalPFAMPF15867Dynein_attach_Ncoord: 13..78
e-value: 5.1E-17
score: 61.6
IPR042422Coiled-coil domain-containing protein 103PANTHERPTHR28572FAMILY NOT NAMEDcoord: 11..287
NoneNo IPR availablePANTHERPTHR28572:SF1COILED-COIL DOMAIN-CONTAINING PROTEIN 103coord: 11..287

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17461contigL-elsbetiae_contig17461:514..3103 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17461.4905.1mRNA_L-elsbetiae_contig17461.4905.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17461 472..3206 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17461.4905.1 ID=prot_L-elsbetiae_contig17461.4905.1|Name=mRNA_L-elsbetiae_contig17461.4905.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=290bp
MASRGNMEALHLETSKLHLELSAALKEDVSRKKTDEMKKRAIHTAANYDE
FRHMVSCAQLTPVTRKEMEMLSDQKRGWQGRSGGVVPATKKTGSSGRKKT
ARGTRKSDSTDIGGGAKAGGPVRAPRDYSQFQRDWRRRCRTDDARREYLR
MISPDKLPVLFRVEMEPDILGQVLSLICGEFLAQPAGHQSDSSAEASTHQ
PGDGKEGSVVGSARPCNGKIPLDEDGARFCMEWLWALSRTGRFAVNILFL
EEKEKLELACLFDLITAAFQENGDEGTGRVHSLRKAYAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025986RPAP3-like_C
IPR031733Dynein_attach_N
IPR042422CC103