mRNA_L-elsbetiae_contig1742.4889.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A0A022QQC9_ERYGU (Uncharacterized protein n=5 Tax=Eukaryota TaxID=2759 RepID=A0A022QQC9_ERYGU) HSP 1 Score: 240 bits (612), Expect = 4.600e-80 Identity = 103/110 (93.64%), Postives = 109/110 (99.09%), Query Frame = 1 Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330 MAKHHPDL+MCRKQPGIAIGRLCEKCDGKCV+CDSYVRPCTLVR+CDECNYGSF+GRC ICGGPGISDAYYC+ECTQQEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR Sbjct: 1 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGPGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A0A835YSG5_9STRA (U2 snRNP protein Rds3p n=2 Tax=Eukaryota TaxID=2759 RepID=A0A835YSG5_9STRA) HSP 1 Score: 238 bits (608), Expect = 1.870e-79 Identity = 106/110 (96.36%), Postives = 108/110 (98.18%), Query Frame = 1 Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGS+EGRC ICGG GISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFK+R Sbjct: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSYEGRCVICGGVGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKQR 110
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: M4E1W9_BRARP (Uncharacterized protein n=15 Tax=Eukaryota TaxID=2759 RepID=M4E1W9_BRARP) HSP 1 Score: 239 bits (610), Expect = 2.120e-79 Identity = 105/110 (95.45%), Postives = 109/110 (99.09%), Query Frame = 1 Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330 MAKHHPDL+MCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSF+GRCTICGG GISDAYYC+ECTQQEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR Sbjct: 26 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFQGRCTICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 135
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A0A7S0HIU9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HIU9_9EUKA) HSP 1 Score: 239 bits (609), Expect = 3.680e-79 Identity = 103/110 (93.64%), Postives = 108/110 (98.18%), Query Frame = 1 Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330 MAKHHPDL+MCRKQPGIA+GRLCEKCDGKC +CDSYVRPCTLVRICDECNYGS+EGRC ICGGPGISDAYYC+ECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR Sbjct: 32 MAKHHPDLIMCRKQPGIAVGRLCEKCDGKCPICDSYVRPCTLVRICDECNYGSYEGRCVICGGPGISDAYYCKECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 141
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: M4DYK5_BRARP (Uncharacterized protein n=11 Tax=Brassicaceae TaxID=3700 RepID=M4DYK5_BRARP) HSP 1 Score: 237 bits (605), Expect = 5.370e-79 Identity = 104/110 (94.55%), Postives = 108/110 (98.18%), Query Frame = 1 Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330 MAKHHPDL+MCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSF+GRC ICGG GISDAYYC+ECTQQEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR Sbjct: 1 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: PHF5A_ARATH (PHD finger-like domain-containing protein 5A n=13 Tax=rosids TaxID=71275 RepID=PHF5A_ARATH) HSP 1 Score: 237 bits (604), Expect = 7.630e-79 Identity = 103/110 (93.64%), Postives = 108/110 (98.18%), Query Frame = 1 Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330 MAKHHPDL+MCRKQPGIAIGRLCEKCDGKCV+CDSYVRPCTLVRICDECNYGSF+GRC ICGG GISDAYYC+ECTQQEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR Sbjct: 1 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: B3S8G1_TRIAD (Uncharacterized protein n=44 Tax=Eumetazoa TaxID=6072 RepID=B3S8G1_TRIAD) HSP 1 Score: 237 bits (604), Expect = 7.630e-79 Identity = 102/110 (92.73%), Postives = 108/110 (98.18%), Query Frame = 1 Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330 MAKHHPDL+MCRKQPG+AIGRLCEKCDGKCV+CDSYVRPCTLVRICDECNYGS++GRC ICGGPGISDAYYC+ECT QEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR Sbjct: 1 MAKHHPDLIMCRKQPGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGISDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A7SWK0_NEMVE (Predicted protein n=5 Tax=Eumetazoa TaxID=6072 RepID=A7SWK0_NEMVE) HSP 1 Score: 237 bits (604), Expect = 7.630e-79 Identity = 101/110 (91.82%), Postives = 108/110 (98.18%), Query Frame = 1 Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330 MAKHHPDL+MCRKQPG+AIGRLCEKCDGKCV+CDSYVRPCTLVRICDECNYGS++GRC ICGGPG+SDAYYC+ECT QEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR Sbjct: 1 MAKHHPDLIMCRKQPGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTVQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A0A7S2RJG3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJG3_9STRA) HSP 1 Score: 237 bits (604), Expect = 7.630e-79 Identity = 104/110 (94.55%), Postives = 107/110 (97.27%), Query Frame = 1 Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCV+CDSYVRP TLVRICDECNYGS+EGRC ICGGPGISDAYYCREC QQEKDRDGCPKI+NLGSSKTDLFYERKKYGFKKR Sbjct: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRPATLVRICDECNYGSYEGRCVICGGPGISDAYYCRECCQQEKDRDGCPKIINLGSSKTDLFYERKKYGFKKR 110
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A0A816L1T2_BRANA ((rape) hypothetical protein n=1 Tax=Brassica napus TaxID=3708 RepID=A0A816L1T2_BRANA) HSP 1 Score: 237 bits (605), Expect = 1.190e-78 Identity = 104/110 (94.55%), Postives = 108/110 (98.18%), Query Frame = 1 Query: 1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 330 MAKHHPDL+MCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSF+GRC ICGG GISDAYYC+ECTQQEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR Sbjct: 25 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 134 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1742.4889.1 >prot_L-elsbetiae_contig1742.4889.1 ID=prot_L-elsbetiae_contig1742.4889.1|Name=mRNA_L-elsbetiae_contig1742.4889.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=111bp MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNback to top mRNA from alignment at L-elsbetiae_contig1742:12144..13703+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1742.4889.1 ID=mRNA_L-elsbetiae_contig1742.4889.1|Name=mRNA_L-elsbetiae_contig1742.4889.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1560bp|location=Sequence derived from alignment at L-elsbetiae_contig1742:12144..13703+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1742:12144..13703+ >mRNA_L-elsbetiae_contig1742.4889.1 ID=mRNA_L-elsbetiae_contig1742.4889.1|Name=mRNA_L-elsbetiae_contig1742.4889.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=666bp|location=Sequence derived from alignment at L-elsbetiae_contig1742:12144..13703+ (Laminarionema elsbetiae ELsaHSoW15)back to top |