prot_L-elsbetiae_contig1742.4889.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1742.4889.1
Unique Name	prot_L-elsbetiae_contig1742.4889.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	111

Homology

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BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A0A022QQC9_ERYGU (Uncharacterized protein n=5 Tax=Eukaryota TaxID=2759 RepID=A0A022QQC9_ERYGU)

HSP 1 Score: 238 bits (608), Expect = 5.690e-80
Identity = 103/110 (93.64%), Postives = 109/110 (99.09%), Query Frame = 0

Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
            MAKHHPDL+MCRKQPGIAIGRLCEKCDGKCV+CDSYVRPCTLVR+CDECNYGSF+GRC ICGGPGISDAYYC+ECTQQEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR
Sbjct:    1 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGPGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110

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BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A0A835YSG5_9STRA (U2 snRNP protein Rds3p n=2 Tax=Eukaryota TaxID=2759 RepID=A0A835YSG5_9STRA)

HSP 1 Score: 237 bits (604), Expect = 2.320e-79
Identity = 106/110 (96.36%), Postives = 108/110 (98.18%), Query Frame = 0

Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
            MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGS+EGRC ICGG GISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFK+R
Sbjct:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSYEGRCVICGGVGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKQR 110

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BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: M4E1W9_BRARP (Uncharacterized protein n=15 Tax=Eukaryota TaxID=2759 RepID=M4E1W9_BRARP)

HSP 1 Score: 238 bits (606), Expect = 2.620e-79
Identity = 105/110 (95.45%), Postives = 109/110 (99.09%), Query Frame = 0

Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
            MAKHHPDL+MCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSF+GRCTICGG GISDAYYC+ECTQQEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR
Sbjct:   26 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFQGRCTICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 135

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BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A0A7S0HIU9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HIU9_9EUKA)

HSP 1 Score: 237 bits (605), Expect = 4.550e-79
Identity = 103/110 (93.64%), Postives = 108/110 (98.18%), Query Frame = 0

Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
            MAKHHPDL+MCRKQPGIA+GRLCEKCDGKC +CDSYVRPCTLVRICDECNYGS+EGRC ICGGPGISDAYYC+ECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR
Sbjct:   32 MAKHHPDLIMCRKQPGIAVGRLCEKCDGKCPICDSYVRPCTLVRICDECNYGSYEGRCVICGGPGISDAYYCKECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 141

[Close]

BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: M4DYK5_BRARP (Uncharacterized protein n=11 Tax=Brassicaceae TaxID=3700 RepID=M4DYK5_BRARP)

HSP 1 Score: 236 bits (601), Expect = 6.660e-79
Identity = 104/110 (94.55%), Postives = 108/110 (98.18%), Query Frame = 0

Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
            MAKHHPDL+MCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSF+GRC ICGG GISDAYYC+ECTQQEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR
Sbjct:    1 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110

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BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: PHF5A_ARATH (PHD finger-like domain-containing protein 5A n=13 Tax=rosids TaxID=71275 RepID=PHF5A_ARATH)

HSP 1 Score: 235 bits (600), Expect = 9.460e-79
Identity = 103/110 (93.64%), Postives = 108/110 (98.18%), Query Frame = 0

Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
            MAKHHPDL+MCRKQPGIAIGRLCEKCDGKCV+CDSYVRPCTLVRICDECNYGSF+GRC ICGG GISDAYYC+ECTQQEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR
Sbjct:    1 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110

[Close]

BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: B3S8G1_TRIAD (Uncharacterized protein n=44 Tax=Eumetazoa TaxID=6072 RepID=B3S8G1_TRIAD)

HSP 1 Score: 235 bits (600), Expect = 9.460e-79
Identity = 102/110 (92.73%), Postives = 108/110 (98.18%), Query Frame = 0

Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
            MAKHHPDL+MCRKQPG+AIGRLCEKCDGKCV+CDSYVRPCTLVRICDECNYGS++GRC ICGGPGISDAYYC+ECT QEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR
Sbjct:    1 MAKHHPDLIMCRKQPGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGISDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110

[Close]

BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A7SWK0_NEMVE (Predicted protein n=5 Tax=Eumetazoa TaxID=6072 RepID=A7SWK0_NEMVE)

HSP 1 Score: 235 bits (600), Expect = 9.460e-79
Identity = 101/110 (91.82%), Postives = 108/110 (98.18%), Query Frame = 0

Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
            MAKHHPDL+MCRKQPG+AIGRLCEKCDGKCV+CDSYVRPCTLVRICDECNYGS++GRC ICGGPG+SDAYYC+ECT QEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR
Sbjct:    1 MAKHHPDLIMCRKQPGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTVQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110

[Close]

BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A0A7S2RJG3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJG3_9STRA)

HSP 1 Score: 235 bits (600), Expect = 9.460e-79
Identity = 104/110 (94.55%), Postives = 107/110 (97.27%), Query Frame = 0

Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
            MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCV+CDSYVRP TLVRICDECNYGS+EGRC ICGGPGISDAYYCREC QQEKDRDGCPKI+NLGSSKTDLFYERKKYGFKKR
Sbjct:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRPATLVRICDECNYGSYEGRCVICGGPGISDAYYCRECCQQEKDRDGCPKIINLGSSKTDLFYERKKYGFKKR 110

[Close]

BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Match: A0A816L1T2_BRANA ((rape) hypothetical protein n=1 Tax=Brassica napus TaxID=3708 RepID=A0A816L1T2_BRANA)

HSP 1 Score: 236 bits (601), Expect = 1.470e-78
Identity = 104/110 (94.55%), Postives = 108/110 (98.18%), Query Frame = 0

Query:    1 MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
            MAKHHPDL+MCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSF+GRC ICGG GISDAYYC+ECTQQEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR
Sbjct:   25 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 134

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1742.4889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A022QQC9_ERYGU	5.690e-80	93.64	Uncharacterized protein n=5 Tax=Eukaryota TaxID=27...	[more]
A0A835YSG5_9STRA	2.320e-79	96.36	U2 snRNP protein Rds3p n=2 Tax=Eukaryota TaxID=275...	[more]
M4E1W9_BRARP	2.620e-79	95.45	Uncharacterized protein n=15 Tax=Eukaryota TaxID=2...	[more]
A0A7S0HIU9_9EUKA	4.550e-79	93.64	Hypothetical protein n=1 Tax=Phaeocystis antarctic...	[more]
M4DYK5_BRARP	6.660e-79	94.55	Uncharacterized protein n=11 Tax=Brassicaceae TaxI...	[more]
PHF5A_ARATH	9.460e-79	93.64	PHD finger-like domain-containing protein 5A n=13 ...	[more]
B3S8G1_TRIAD	9.460e-79	92.73	Uncharacterized protein n=44 Tax=Eumetazoa TaxID=6...	[more]
A7SWK0_NEMVE	9.460e-79	91.82	Predicted protein n=5 Tax=Eumetazoa TaxID=6072 Rep...	[more]
A0A7S2RJG3_9STRA	9.460e-79	94.55	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A816L1T2_BRANA	1.470e-78	94.55	(rape) hypothetical protein n=1 Tax=Brassica napus...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005345	PHF5-like	PIRSF	PIRSF016468	RDS3p	coord: 1..110 e-value: 2.4E-51 score: 170.5
IPR005345	PHF5-like	PFAM	PF03660	PHF5	coord: 1..104 e-value: 4.4E-50 score: 168.2
IPR005345	PHF5-like	PANTHER	PTHR13120	FAMILY NOT NAMED	coord: 1..110
None	No IPR available	PANTHER	PTHR13120:SF2		coord: 1..110

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1742	contig	L-elsbetiae_contig1742:12144..13616 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1742.4889.1	mRNA_L-elsbetiae_contig1742.4889.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1742 12144..13703 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1742.4889.1 ID=prot_L-elsbetiae_contig1742.4889.1|Name=mRNA_L-elsbetiae_contig1742.4889.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=111bp
MAKHHPDLVMCRKQPGIAIGRLCEKCDGKCVVCDSYVRPCTLVRICDECN
YGSFEGRCTICGGPGISDAYYCRECTQQEKDRDGCPKIVNLGSSKTDLFY
ERKKYGFKKR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005345	PHF5