mRNA_L-elsbetiae_contig17043.4722.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17043.4722.1 vs. uniprot
Match: D7FK42_ECTSI (DNA-directed DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK42_ECTSI) HSP 1 Score: 449 bits (1156), Expect = 1.020e-144 Identity = 277/376 (73.67%), Postives = 295/376 (78.46%), Query Frame = 1 Query: 1 AACEGEDKEAAEAGGYRLPLSCEVGYNERWLALAKLVAISTIKVAFNAQVALMPLIAWRRRPESGAFIARAAAXXXXXXXXXXXXXXXGSGDKESGRSGASDGSQQQPADQYSTVSGLFDPRVAAWMSDTGTTDKGLEFEALCVSWLKQEAAHAGGAGARSSGEGPSAAIVAAVLRAEECCKRSLALAEQLSVELERAKMLAACEQQVEMPAISVLAGMEVSGVVFLPERVTRFSAALQQHLESLERTAVVAVGGRQFNLASPDQVADILFNHLKLPSPPVKAGSLHASTSAEVLAGLQGKHAVVAPIFEFRGVNKYKTTYVDKLAERALGAAAAEGATTASQMAEEGAVRIHAAWNQTSARTGRLSCSRPNLQQV 1128 AAC GEDKEAA+A GY LPL CE Y+ERW A AKLVA+ KVA LMPLIAWRRRPES F+AR+AAXXXXXXXXXXXXXXX S + ++TVSGLFD RVAAWM+DTG DK LEFEALCVSWLK E + A G A S G AIVAAV RAE CC+R+LALA ++S ELE AKMLAACEQ VEMPAI VLAGMEVSGVVFLPERVTRFS AL HLE L+RTAV AVGGR FNLASPDQVAD+LF HLKLPSPPVKAGS+HASTSAEVL GLQGKHAVVAPI EFRGVNKYKTTYVDKLAERALGAAAAE A ASQ A GA RIHA WNQTSARTGRLSCSRPNLQQ+ Sbjct: 551 AACVGEDKEAAKAAGYHLPLDCETSYDERWAAFAKLVALPVKKVA------LMPLIAWRRRPESRTFLARSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLSTKH----HTTVSGLFDTRVAAWMTDTGKADKALEFEALCVSWLKGEGSDAEGVNAGSGDGGRLPAIVAAVARAEGCCRRNLALAGKISAELEGAKMLAACEQ-VEMPAIPVLAGMEVSGVVFLPERVTRFSDALGNHLEGLKRTAVKAVGGRDFNLASPDQVADVLFKHLKLPSPPVKAGSVHASTSAEVLEGLQGKHAVVAPILEFRGVNKYKTTYVDKLAERALGAAAAESAVPASQGA--GAARIHATWNQTSARTGRLSCSRPNLQQM 913
BLAST of mRNA_L-elsbetiae_contig17043.4722.1 vs. uniprot
Match: A0A6H5J5W8_9PHAE (POLAc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5W8_9PHAE) HSP 1 Score: 389 bits (998), Expect = 3.820e-124 Identity = 252/448 (56.25%), Postives = 270/448 (60.27%), Query Frame = 1 Query: 4 ACEGEDKEAAEAGGYRLPLSCEVGYNERWLALAKLVAISTIKVAFNAQVALMPLIAWRRRPESGAFIARAAAXXXXXXXXXXXXXXXGSGDKESGRSGASDGSQQQPA-----------------DQYSTVSGLFDPRVAAWMSDTGTTDKGLEFEALCVSWLKQE---AAH---AGGAGARSSGEGPSAAIVAAVLRAEECCKRSLALAEQLSVELERAKMLAACEQQVEMPAISVLAGMEVSGVVFLPERVTRFSAALQQHLESLERTAVVAVGGRQFNLASPDQ--------------------------------------------------VADILFNHLKLPSPPVKAGSLHASTSAEVLAGLQGKHAVVAPIFEFRGVNKYKTTYVDKLAERALGAAAAEGATTASQMAEEGAVRIHAAWNQTSARTGRLSCSRPNLQQV 1128 AC GEDKEAAEA GY LPL CEV ALMPLIAWRRRPES F+AR+AA + G SD +P+ ++TVS LFD RVAAWM+DTG DK LEFEALCVSWLK E A H A G ARS G AIVAAV+ AE CC+R+LALA ++S ELE AKMLAACEQ VEMP + VLAGMEVSGVVFLPERVTRFS AL HLE L+RTAV AVGGR FNLASPDQ VADILF HLKLPSPP+KAGS+HASTSAEVL GLQGKHAVVAPI EFRGVNKYKTTYVDKLAERALGAAAA+ A ASQ A GA RIHA WNQTSARTGRLSCSRPNLQQ Sbjct: 522 ACVGEDKEAAEAAGYHLPLDCEV--------------------------ALMPLIAWRRRPESRTFLARSAA---------------------AAAEGGSDRDGHEPSVDSXXXXXXXXXXHVSTKHHTTVSRLFDTRVAAWMTDTGKADKALEFEALCVSWLKGEGSDAVHKPDAEGVNARSGDGGRLPAIVAAVVHAEGCCRRNLALAGKISAELEGAKMLAACEQ-VEMPTVPVLAGMEVSGVVFLPERVTRFSNALGNHLEGLKRTAVKAVGGRDFNLASPDQAKKQQIGKRMQQGRIDGSSRSRRRVASFRTGSCQRGLREGAHGGQGGGTAVADILFKHLKLPSPPLKAGSVHASTSAEVLEGLQGKHAVVAPILEFRGVNKYKTTYVDKLAERALGAAAADSAVPASQGA--GATRIHATWNQTSARTGRLSCSRPNLQQA 919
BLAST of mRNA_L-elsbetiae_contig17043.4722.1 vs. uniprot
Match: A0A2T0XSH9_9BACT (DNA polymerase I n=2 Tax=Marinilabilia salmonicolor TaxID=989 RepID=A0A2T0XSH9_9BACT) HSP 1 Score: 111 bits (278), Expect = 4.980e-23 Identity = 74/193 (38.34%), Postives = 105/193 (54.40%), Query Frame = 1 Query: 550 SLALAEQLSVELERAKMLAACEQQVEMPAISVLAGMEVSGVVFLPERVTRFSAALQQHLESLERTAVVAVGGRQFNLASPDQVADILFNHLKLPSPPVKAGSLHASTSAEVLAGLQGKHAVVAPIFEFRGVNKYKTTYVDKLAERALGAAAAEGATTASQMAEEGAVRIHAAWNQTSARTGRLSCSRPNLQQV 1128 +L L E L ELE KM++ E VEMP + VLA ME GVV + + F+ LQQ +E+LE+ ++ G FN+ASP QV ++LF+ LK+ + K S ST+ E L L+ KH ++ I EFRG+ K TYV+ L + + + R+H ++NQ TGRLS S PNLQ + Sbjct: 500 TLQLKEPLLKELEELKMVSLFED-VEMPLLKVLAEMEYHGVVLDSDALADFAGKLQQRIEALEK-GIIEDAGTDFNVASPRQVGEVLFDKLKIDAKAKKTKSGQYSTNEETLQKLKDKHPIIEKILEFRGLKKLLNTYVEALPK----------------LINKDTGRLHTSFNQAVVVTGRLSSSNPNLQNI 674
BLAST of mRNA_L-elsbetiae_contig17043.4722.1 vs. uniprot
Match: A0A6N6MAB0_9FLAO (DNA polymerase I n=1 Tax=Salibacter halophilus TaxID=1803916 RepID=A0A6N6MAB0_9FLAO) HSP 1 Score: 107 bits (266), Expect = 1.770e-21 Identity = 80/264 (30.30%), Postives = 130/264 (49.24%), Query Frame = 1 Query: 352 LFDPRVAAWMSDTGTTDKGLEFEA-LCVSWLKQEAAHAGGAGARSSGEGPSAAIVAAVLRAEECCKRSLALAEQLSVELERAKMLAACEQQV----EMPAISVLAGMEVSGVVFLPERVTRFSAALQQHLESLERTAVVAVGGRQFNLASPDQVADILFNHLKLPSPPVKAGSLHASTSAEVLAGLQGKHAVVAPIFEFRGVNKYKTTYVDKLAERALGAAAAEGATTASQMAEEGAVRIHAAWNQTSARTGRLSCSRPNLQQV 1128 LFD +A +++D + ++ A +S+ + + G ++ A+ A A E +L L +L +L++ K EQ + EMP ++VL+ ME G+ + + +S LQ+ ++S+E+ + + G +FN+ SP QV ++LF+ LK+ P K S +T+ E L + GKH +V I E+R V K K TYVD L + E + RIH +NQ A TGRLS +PNLQ + Sbjct: 436 LFDTMIAHYLTDPENNRRNMDVLAETYLSYRPKPISDLIGKKGKNQKSMREVAVEEAAEYAGEDADITLQLKSELEKDLKKGK-----EQNIFDDIEMPLVNVLSDMECEGIKMDRDILDDYSKNLQKEIDSIEK-GIYEIAGHEFNIGSPKQVGEVLFDELKVTDKPKKTKSGQYATNEEALQSIAGKHEIVEQILEYREVVKLKNTYVDPLPN----------------LINERSGRIHTTFNQVRAATGRLSSDKPNLQNI 677
BLAST of mRNA_L-elsbetiae_contig17043.4722.1 vs. uniprot
Match: UPI00036303B8 (DNA polymerase I n=1 Tax=Eudoraea adriatica TaxID=446681 RepID=UPI00036303B8) HSP 1 Score: 106 bits (264), Expect = 3.230e-21 Identity = 69/190 (36.32%), Postives = 103/190 (54.21%), Query Frame = 1 Query: 559 LAEQLSVELERAKMLAACEQQVEMPAISVLAGMEVSGVVFLPERVTRFSAALQQHLESLERTAVVAVGGRQFNLASPDQVADILFNHLKLPSPPVKAGSLHASTSAEVLAGLQGKHAVVAPIFEFRGVNKYKTTYVDKLAERALGAAAAEGATTASQMAEEGAVRIHAAWNQTSARTGRLSCSRPNLQQV 1128 LA Q + EL AK + +E+P +SVLA ME+ G+ E + S L + +++LE + G +FN+ASP Q+ +ILFN LKL + P K + STS +VL+ L +H ++ + +RG+ K K+TY+D L E+ EE R+H + QT A TGRLS + PNLQ + Sbjct: 524 LANQFAKELREAKTQELF-RNIEVPLVSVLADMELEGINLDKEFLHSLSKDLDEDIKNLE-VKIYQEAGEEFNIASPKQLGEILFNKLKLVNKPKKTKTGQYSTSEDVLSSLAKEHDIIKDVLNYRGLAKLKSTYIDALPEQV----------------EESTGRVHTDYMQTVAATGRLSSNNPNLQNI 695
BLAST of mRNA_L-elsbetiae_contig17043.4722.1 vs. uniprot
Match: A0A1J5A6P1_9CHLR (DNA polymerase I n=1 Tax=Anaerolineae bacterium CG2_30_64_16 TaxID=1805005 RepID=A0A1J5A6P1_9CHLR) HSP 1 Score: 105 bits (261), Expect = 6.480e-21 Identity = 88/263 (33.46%), Postives = 128/263 (48.67%), Query Frame = 1 Query: 352 LFDPRVAAWMSDTGTTDKGLEFEA---LCVSWLKQEAAHAGGAGARSSGEGPSAAIVAAVLRAEECCKRSLALAEQLSVELERAKMLAACEQQVEMPAISVLAGMEVSGVVFLPERVTRFSAALQQHLESLERTAVVAVGGRQFNLASPDQVADILFNHLKLPSPPVKAGSLHA-STSAEVLAGLQGKHAVVAPIFEFRGVNKYKTTYVDKLAERALGAAAAEGATTASQMAEEGAVRIHAAWNQTSARTGRLSCSRPNLQQV 1128 L D + AW+ D G+ GL+ +A L V G + + P+A A A +LALA+QL EL K L + + VEMP + VL ME +G+ + + + S L L+ +E + + G FN+ S Q++D+LF L LP+ +K A ST+A+VL GL+GKH +V I E R ++K +TYV+ L M R+H ++NQT A TGRLS S PNLQ + Sbjct: 174 LVDTMIGAWLIDPGSRGLGLKDQAWTRLKVEMTPISELIGTGKNQITMDQAPAAQAAA---YASADAAMTLALADQLLPELAE-KGLTSLFRDVEMPLVPVLVAMETAGIKLDVDYLAQMSVELTARLQQIE-LEIQQIAGYAFNINSTQQLSDVLFGKLGLPTQGLKKTKAGAYSTAADVLEGLRGKHEIVDLILEQRQLSKLLSTYVNALPT----------------MVNPRTGRLHTSFNQTGAETGRLSSSAPNLQNI 415
BLAST of mRNA_L-elsbetiae_contig17043.4722.1 vs. uniprot
Match: A0A7C2VKE9_9BACT (DNA polymerase I n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C2VKE9_9BACT) HSP 1 Score: 105 bits (261), Expect = 7.260e-21 Identity = 70/186 (37.63%), Postives = 100/186 (53.76%), Query Frame = 1 Query: 571 LSVELERAKMLAACEQQVEMPAISVLAGMEVSGVVFLPERVTRFSAALQQHLESLERTAVVAVGGRQFNLASPDQVADILFNHLKLPSPPVKAGSLHASTSAEVLAGLQGKHAVVAPIFEFRGVNKYKTTYVDKLAERALGAAAAEGATTASQMAEEGAVRIHAAWNQTSARTGRLSCSRPNLQQV 1128 L+ LE+ L ++VEMP +SVLA ME +GV R+ R S L + LE+L + A+ G FN+ SP Q+++ILF+ L L S +++G ST A VL L G H ++ I ++R ++K K TYVDKL + R+H ++NQT TGRLS S PNLQ + Sbjct: 384 LNSRLEKQPALKKLFEEVEMPLVSVLAAMESNGVSIDSGRLKRMSGELAETLENLT-VKIYALAGTSFNIDSPKQLSEILFDRLGLSS--IRSGKTGRSTDAAVLEQLSGLHPIIELILQYRQLSKLKNTYVDKLGS----------------LINPRTSRLHTSFNQTITATGRLSSSDPNLQNI 550
BLAST of mRNA_L-elsbetiae_contig17043.4722.1 vs. uniprot
Match: A0A2E5XSK4_9FLAO (DNA polymerase I n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2E5XSK4_9FLAO) HSP 1 Score: 105 bits (261), Expect = 7.810e-21 Identity = 66/169 (39.05%), Postives = 88/169 (52.07%), Query Frame = 1 Query: 622 VEMPAISVLAGMEVSGVVFLPERVTRFSAALQQHLESLERTAVVAVGGRQFNLASPDQVADILFNHLKLPSPPVKAGSLHASTSAEVLAGLQGKHAVVAPIFEFRGVNKYKTTYVDKLAERALGAAAAEGATTASQMAEEGAVRIHAAWNQTSARTGRLSCSRPNLQQV 1128 +E+P I VL+ ME+ G+ + + FS L+ + L +V + G FNLASP Q+ +LF HLKL P K + STS E L L+GKH ++ I EFR + K K+TYVD L E +A E RIH + Q A TGRLS PNLQ + Sbjct: 530 IELPLIPVLSAMEIEGIRIDIDALNDFSKELESRILKLN-DSVQTIAGIPFNLASPKQLGQVLFEHLKLVDKPKKTKTGQYSTSEETLLKLKGKHEIIDDILEFRQLQKLKSTYVDALPE----------------LASEKEERIHTTYQQAVASTGRLSSINPNLQNI 681
BLAST of mRNA_L-elsbetiae_contig17043.4722.1 vs. uniprot
Match: A0A1K1PHI6_SELRU (DNA polymerase I n=5 Tax=Selenomonas TaxID=970 RepID=A0A1K1PHI6_SELRU) HSP 1 Score: 104 bits (260), Expect = 1.020e-20 Identity = 80/213 (37.56%), Postives = 115/213 (53.99%), Query Frame = 1 Query: 490 EGPSAAIVAAVLRAEECCKRSLALAEQLSVELERAKMLAACEQQVEMPAISVLAGMEVSGVVFLPERVTRFSAALQQHLESLERTAVVAVGGRQFNLASPDQVADILFNHLKLPSPPVKAGSLHASTSAEVLAGLQGKHAVVAPIFEFRGVNKYKTTYVDKLAERALGAAAAEGATTASQMAEEGAVRIHAAWNQTSARTGRLSCSRPNLQQV 1128 E S A AV A LAE+L EL+ K+ A ++E+P + VLA ME +G+ E + + L+ L+SL++ V + G +FN+ SP Q+ ++LF L+LP PVK ST+AEVL L+ KH VV + +R ++K K+TY+D L E +GA EG RI+ ++NQT TGRLS S PNLQ + Sbjct: 431 ENLSGAEAEAVWEAYALASLQPVLAEKLK-ELQMDKLYA----EIELPLVEVLAAMEQNGIYINREELVKKGEELEARLQSLQQDIYV-LAGTEFNINSPKQLGEVLFERLELP--PVKKTKTGYSTNAEVLESLRDKHPVVEQVLHYRTLSKLKSTYIDGLQEL-IGA---EG-------------RIYTSFNQTVTATGRLSSSDPNLQNI 618
BLAST of mRNA_L-elsbetiae_contig17043.4722.1 vs. uniprot
Match: A0A2T4WFJ9_9BACT (DNA polymerase I n=7 Tax=Bacteroidetes TaxID=976 RepID=A0A2T4WFJ9_9BACT) HSP 1 Score: 104 bits (260), Expect = 1.060e-20 Identity = 64/171 (37.43%), Postives = 92/171 (53.80%), Query Frame = 1 Query: 616 QQVEMPAISVLAGMEVSGVVFLPERVTRFSAALQQHLESLERTAVVAVGGRQFNLASPDQVADILFNHLKLPSPPVKAGSLHASTSAEVLAGLQGKHAVVAPIFEFRGVNKYKTTYVDKLAERALGAAAAEGATTASQMAEEGAVRIHAAWNQTSARTGRLSCSRPNLQQV 1128 + +EMP + VLA ME G+ + +S L Q ++ LE T +VA+ GR FN+ SP Q+ ++LF LKL P K + +TS ++L G + KH +V I +R + K K+TYVD L E + RIH ++NQT A TGRLS + PNLQ + Sbjct: 541 ENIEMPLVPVLARMEREGIRVDVASLNSYSRELGQLIDELEGT-IVALAGRPFNVGSPRQLGEVLFEDLKLSDKPKKTKTGQYATSEDILQGYRSKHEIVDSILTYRELKKLKSTYVDALPE----------------LVHPATGRIHTSYNQTVAATGRLSSTNPNLQNI 694 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17043.4722.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17043.4722.1 >prot_L-elsbetiae_contig17043.4722.1 ID=prot_L-elsbetiae_contig17043.4722.1|Name=mRNA_L-elsbetiae_contig17043.4722.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=376bp AACEGEDKEAAEAGGYRLPLSCEVGYNERWLALAKLVAISTIKVAFNAQVback to top mRNA from alignment at L-elsbetiae_contig17043:3..3536+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17043.4722.1 ID=mRNA_L-elsbetiae_contig17043.4722.1|Name=mRNA_L-elsbetiae_contig17043.4722.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3534bp|location=Sequence derived from alignment at L-elsbetiae_contig17043:3..3536+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17043:3..3536+ >mRNA_L-elsbetiae_contig17043.4722.1 ID=mRNA_L-elsbetiae_contig17043.4722.1|Name=mRNA_L-elsbetiae_contig17043.4722.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2256bp|location=Sequence derived from alignment at L-elsbetiae_contig17043:3..3536+ (Laminarionema elsbetiae ELsaHSoW15)back to top |