mRNA_L-elsbetiae_contig1694.4655.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1694.4655.1
Unique NamemRNA_L-elsbetiae_contig1694.4655.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: D7FSU4_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSU4_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 8.040e-37
Identity = 110/287 (38.33%), Postives = 154/287 (53.66%), Query Frame = 3
Query:  369 PRVAMYELHKAALCGSTERTVALVSRGVIGVDEGTPDS-FTPLMIAATFGYSRVVGILLDNGANATVGNENGPMALHGSAQGGHLAVTKLLLKADADLEAKTADVG------PADPGCT------------PLHLAAERGHLKAGRS-----CSPRTTRLLVDAGADTTTVVRVAGMGGEVVFDDMPQALAEMFLSDKMVQGKDA---TESQLHSLEANRRLPMRVEAVHAVSWLWASDVPSVTHAATEGTVR--ATGATLTPLASMLPILRRRAGRPRVLLATLFR 1142
            PR     LH+AA  G  E   AL++     +D G  +  +T LMIA+  GYS +V +LL  GA  ++ + +G   LH S   GH+AVTK L++A A LE  T  +        AD GC             PL +AA+ GH +  +      C PR  +LLV+AGADTT+ V V+   G+        ++  + L+ +++ G+     TE QL  L+A RRL +RVEAVHAVSWLW++D+ ++TH+   GT R  AT  T TPL  M+   RRR  R  V L+ L R
Sbjct:   11 PRGPKNSLHEAADYGFFETAAALLASDAFDIDLGEDEGGWTALMIASHRGYSLIVRMLLSKGAQVSIADVHGDSGLHLSVLAGHMAVTKTLVEAGAPLEVATKQLLCTPLHLAADNGCIESITTSLEADVPPLDMAAQNGHAEVVQELIRQHCRPRVGQLLVEAGADTTSAVPVSKHFGK-------DSVTPLGLTMRLLDGRSTYPLTEEQLKKLKAIRRLLLRVEAVHAVSWLWSTDISTITHSTAHGTDRTIATSTTGTPLMLMM---RRRTKRREVPLSALLR 287          
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 5.090e-28
Identity = 82/181 (45.30%), Postives = 101/181 (55.80%), Query Frame = 3
Query:  696 GCTPLHLAAERGHLKAGRSCSPRTTRLLVDAGADTTTVVRVAGMGGEVVFDDMPQALAEMFLSDKMVQGKDATESQLHSLEANRRLPMRVEAVHAVSWLWASDVPSVTHAATEGTVRATGAT--LTPLASMLPILRRRAGRPRVLLATLFRHSKRP*LRSVCRMGRAILLGSLDSRSDGTI 1232
            G TPL  + E     +G   +PR  RLLVDAGADTT+ VRV  + G V ++D P A+    L +K+V GK ATE QLH L+A RRL +RV+AVHAVSWLW SD PS+ HA      R+ G      PL+  LPIL+RRA    V +ATL R S           GR      L     GT+
Sbjct:   62 GMTPLSCSIE--WCSSG---NPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVE----RSCGPEPRRPPLSLTLPILKRRAKTCHVFVATLLRSSP-------ISSGRGSRRADLSKEKAGTV 226          
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 3.780e-24
Identity = 99/264 (37.50%), Postives = 134/264 (50.76%), Query Frame = 3
Query:  375 VAMYELHKAALCGSTERTVALVSRGVIGVDEGTPDSFTPLMIAATFGYSRVVGILLDNGANATVGNENGPMALHGSAQGGHLAVTKLLLKADADLEAKTADVGPADP-GCTPLHLAAERGHLKAGRSCSPRTTRLLVDAGADTTTVVRVAGMGGE-VVFDDMPQALAEMFLSDKMVQGKDATESQLHSLEANRRLPMRVEAVHAVSWLWAS-DVPSVTHAATEG-TVRATGATLTPLASMLPILRRRAGRPRVLLATLFRHSKR 1154
            V+   L  AAL G+ +    ++ +  I    G       L  AA   +   + +LLD G       + GP  +  +  G  +AV  LL +  AD +A     G  DP G TP+  A + G   AGR CSP+  RLLVDAGA+TT  V V  +        + P A     L +  V G+ AT+ QL  L+  R L  R EAVHAVSWLWAS + P +  AA +  T  A+ A  TPL +M P+LRR+ G   VLL TLFR+S++
Sbjct:  181 VSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVV----DTGPALILAAENGRAVAVKFLLRRRQADADAYVN--GTRDPYGRTPVMCAVDVG---AGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435          
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 5.080e-21
Identity = 87/256 (33.98%), Postives = 124/256 (48.44%), Query Frame = 3
Query:  390 LHKAALCGSTERTVALVSRGVIGVDEGTPDSFTPLMIAATFGYSRVVGILLDNGANATVGNENGPMALHGSAQGGHLAVTKLLLKADADL-EAKTADVGPADPGCTPLHLAAERGHLKAGRSCSPRTTRLLVDAGADTTTVVRVAGMGGEVVFDDMPQALAEMFLSDKMVQGKDATESQLHSLEANRRLPMRVEAVHAVSWLWASDVPSVTHAATEGTVRATGATLTPLASMLPILRRRAGRPRVLLATLFRHSKR 1154
            L  AA  G +     L+    I    G       L +AA +G   ++ +L+D G    VG     +AL  +   G  A    LL+   +  +    ++   D G T L L + RG+    + C+PR TR LVDAGADTT+ V++         +  P      +   +      AT+ QL  LEA RR+ +RV AVHAVSW+W SD P +   A     R    + T L ++LP+LRRRAGR  +L  TLFR+SK+
Sbjct:  160 LEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVG-----LALLAAVGSGKEAAVGFLLRQQEERWQTSYVNIARDDDGLTAL-LWSFRGNKN--KPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSP--RTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRYSKK 405          
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 6.590e-20
Identity = 111/392 (28.32%), Postives = 147/392 (37.50%), Query Frame = 3
Query:  369 PRVAMYELHKAALCGSTERTVALVSRGVIGVDEGTPDSFTPLMIAATFGYSRVVGILLDNGANATVGNENGPMALHGSAQGGHLAVTKLLLKADADLEAKTADVGPADPGCTPLHLAAERGH-------------LKAGR-------------------------SCSPRTTRLLVD----------AGADTTTVVR-------VAGMGG-------------EVVFDDMP--------------------------------------------------------------QALAEMFLSDKMVQGKDATESQLHSLEANRRLPMRVEAVHAVSWLWASDVPSVTHAATEGTVRATGATLTPLASMLPILRRRAGRPRVLLATLFRHSKR 1154
            PR    ELH AA  GST+RT A++S G+I +++G PD +TPLM+A+  GY+R+V IL+  GAN  +  + G  A                  A ADLEA T+       G  PLHLAA++GH             L + R                            P   RL V           AG   + VVR       + G GG             E   D M                                                               + L + +L +  V G+D TE Q H L A  RL +RVEAVHA SWLW SD P + H A E T R T  T +P + M P+L   + R   LL+ + R+S +
Sbjct:   10 PRGPKNELHFAADTGSTQRTAAILSSGLININQGDPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNAGADLEAATST-----NGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLLIRLNVSRDRFVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDTGIALIGAIKENREGSIKFLLRQQQLQGNPTGAYVDEARDPFGRTPLLCSIEDEGLVDHYLGENRVIGRDITEEQAHKLNAVHRLLLRVEAVHAASWLWVSDAPDIAHTA-EVTKR-TKVTPSPRSRMFPVLGL-STRRNALLSAVLRYSSK 393          
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 7.870e-20
Identity = 98/259 (37.84%), Postives = 130/259 (50.19%), Query Frame = 3
Query:  390 LHKAALCGSTERTVALVSR-GVIGVDEGTPDSFTPLMIAATFGYSRVVGILLDNGANATVGNENGPMALHGSAQGGHLAVTKLLLK---ADADLEAKTADVGPADP-GCTPLHLAAERGHLKAGRSCSPRTTRLLVDAGADTTTVVRVAGMGGEVVFDDMPQALAEMFLSDKMV-QGKDATESQLHSLEANRRLPMRVEAVHAVSWLWASDVPSVTHAATEGTVRATGATLTPLASMLPILRRRAGRPRVLLATLFRHS 1148
            L  AA  G T+    L+   G+ G D  T      L  AA+  +  ++ IL + G   T        AL+ +A  GH A  K LL+    +     + A +   D  G TPL +  +    +A     PR  R+LVDAGADTT+ V+V  + G VVF+D P A  ++ L  K+V  GK AT+  L  LEA  RL +RV+AVHAVSWLW S  P +  A    T       L  L  MLPIL+RR  R   L+ATL R+S
Sbjct:  282 LDLAAKHGHTDVVRELIQELGIEGCD-ATSAGAHALAFAASNQHLDIMAILTEAGVVDT------GKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQA-----PRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRA----TETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYS 524          
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 4.410e-19
Identity = 92/252 (36.51%), Postives = 121/252 (48.02%), Query Frame = 3
Query:  480 SFTPLMIAATFGYSRVVGILLDN-GANATVGNENGPMALHGSAQGGHLAVTKLLLKADADLEAKTADVGPADPGCTPLHLAAERGHLKAG----------------------RSCSPRTTRLLVDAGADTTTVVRVAG-MGGEVVFDDMPQALAEMFLSDKM-VQGKD-ATESQLHSLEANRRLPMRVEAVHAVSWLWASDVPSVTHAATEGTVRATGATLTPLASMLPILRRRAGRPRVLLATLFRHSKRP 1157
            +F PL  AA  G+  VV  L+   G +   G+  G  AL  +AQ  +L +  +L  A          V     G TPL    E+   +                        +   PR  RLLV+AGADTT+ V V   +GG+ V    P  L    + DK+ V G+  A+  QLH LEA RRL +RVEAVHAVSWLW SD+ ++T AA  GT R T  +      ML + RRRA   +V LA L R+S +P
Sbjct:  186 TFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDV-SITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPML-VTRRRARGRKVPLAALLRYSSKP 435          
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 2.950e-18
Identity = 89/251 (35.46%), Postives = 113/251 (45.02%), Query Frame = 3
Query:  477 DSFTPLMIAATFGYSRVVGILLDN-GANATVGNENGPMALHGSAQGGHLAVTKLLLKADADLEAKTADVGPADPGCTPLHLAAE--RGHLKAGRS--------------------CSPRTTRLLVDAGADTTTVVRVAGMGGEVVFDDMPQALAEMFLSDKMVQGKDATESQLHSLEANRRLPMRVEAVHAVSWLWASDVPSVTHAATEGTVR--ATGATLTPLASMLPILRRRAGRPRVLLATLFRHSKR 1154
            + F PL +AA  G+  VV  L+   G +   G+  G  AL  +A    L +  +L  A          V     G  PL    E  RG     R+                    C PR  +LLV+AGADTT+ V +    GE  F   P  L    L  +    K  T  + + LE  RRL +R EAVHAVSWLW SD P++THA  +GT R  AT    TP   ML I RR  GR + LLA L R+S +
Sbjct:  185 ERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGR--SAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFI-MLMIGRRTRGR-KGLLAALLRYSSK 431          
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 3.700e-18
Identity = 98/260 (37.69%), Postives = 130/260 (50.00%), Query Frame = 3
Query:  390 LHKAALCGSTERTVALVSR-GVIGVDEGTPDSFTPLMIAATFGYSRVVGILLDNGANATVGNENGPMALHGSAQGGHLAVTKLLLKADADLEA-KTADVG-PADP-GCTPLHLAAERGHLKAGRSCSPRTTRLLVDAGADTTTVVRVAGMGGEVVFDDMPQALAEMFLSDKMVQGKDATESQLHSLEANRRLPMRVEAVHAVSWLWASDVPSVTHAA--TEGTVRATGATLTP-LASMLPILRRRAGRPRVLLATLFRHS 1148
            L  AA  G     + L+ R G+ G   GT    T L +AA   +  V+  L       T G  +  +AL  +   GH+ V K LL+      + K+A V  P DP G TPL    + G     +SCSP+  RLLVDAGADTT++VR     G +     P +LA   L  K+   K   +  L  LE  RRL +RVEAVHA SWLW + VP V   A  T  T   + +T  P L ++LPILRRRA     + A+L R++
Sbjct:  187 LDTAAQNGRLGVVLELLQRFGIRGCGGGT-GGVTALQLAAMKPHMDVMLAL------TTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVG---LNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYA 436          
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: D8LNF8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF8_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 4.980e-18
Identity = 64/129 (49.61%), Postives = 81/129 (62.79%), Query Frame = 3
Query:  351 VPRKIDPRVAMYELHKAALCGSTERTVALV-SRGVIGVDEGTPDSFTPLMIAATFGYSRVVGILLDNGANATVGNENGPMALHGSAQ-GGHLAVTKLLLKADADLEAKTADVGPADPGCTPLHLAAERG 731
            VP +  PR    +LH+AA  GS ER VAL+ SR  I +++G    +TPLM+AA  G SRVV IL + GAN +V  ++   ALH S Q GGH  VTK+LLKA AD EA T++      G TPLHL A+ G
Sbjct:    6 VPAQPWPRGPQNDLHRAANDGSIERVVALLASRPSIDINQGAEYGWTPLMLAAWRGSSRVVRILPNKGANVSVVADDFHTALHFSTQDGGHPVVTKMLLKAGADFEAVTSE------GETPLHLVADSG 128          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSU4_ECTSI8.040e-3738.33EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LSC5_ECTSI5.090e-2845.30EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1H7_ECTSI3.780e-2437.50EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
D7FVU3_ECTSI5.080e-2133.98EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7G1I8_ECTSI6.590e-2028.32EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FT11_ECTSI7.870e-2037.84EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KJA9_9PHAE4.410e-1936.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQV0_9PHAE2.950e-1835.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVK3_ECTSI3.700e-1837.69EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LNF8_ECTSI4.980e-1849.61EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1694contigL-elsbetiae_contig1694:11142..13677 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score149.4
Seed ortholog evalue2.3e-33
Seed eggNOG ortholog2880.D7FSU4
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1593
Cds size780
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1694.4655.1prot_L-elsbetiae_contig1694.4655.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1694 11522..13244 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815704.2060316-UTR-L-elsbetiae_contig1694:11141..115211622815704.2060316-UTR-L-elsbetiae_contig1694:11141..11521Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1694 11142..11521 +
1691683048.530308-UTR-L-elsbetiae_contig1694:11141..115211691683048.530308-UTR-L-elsbetiae_contig1694:11141..11521Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1694 11142..11521 +
1622815704.2523727-UTR-L-elsbetiae_contig1694:13244..136771622815704.2523727-UTR-L-elsbetiae_contig1694:13244..13677Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1694 13245..13677 +
1691683048.5713406-UTR-L-elsbetiae_contig1694:13244..136771691683048.5713406-UTR-L-elsbetiae_contig1694:13244..13677Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1694 13245..13677 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815704.217423-CDS-L-elsbetiae_contig1694:11521..118811622815704.217423-CDS-L-elsbetiae_contig1694:11521..11881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1694 11522..11881 +
1691683048.5430691-CDS-L-elsbetiae_contig1694:11521..118811691683048.5430691-CDS-L-elsbetiae_contig1694:11521..11881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1694 11522..11881 +
1622815704.2289133-CDS-L-elsbetiae_contig1694:12381..127821622815704.2289133-CDS-L-elsbetiae_contig1694:12381..12782Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1694 12382..12782 +
1691683048.552522-CDS-L-elsbetiae_contig1694:12381..127821691683048.552522-CDS-L-elsbetiae_contig1694:12381..12782Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1694 12382..12782 +
1622815704.2399688-CDS-L-elsbetiae_contig1694:13225..132441622815704.2399688-CDS-L-elsbetiae_contig1694:13225..13244Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1694 13226..13244 +
1691683048.5618818-CDS-L-elsbetiae_contig1694:13225..132441691683048.5618818-CDS-L-elsbetiae_contig1694:13225..13244Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1694 13226..13244 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1694.4655.1

>prot_L-elsbetiae_contig1694.4655.1 ID=prot_L-elsbetiae_contig1694.4655.1|Name=mRNA_L-elsbetiae_contig1694.4655.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=260bp
MYELHKAALCGSTERTVALVSRGVIGVDEGTPDSFTPLMIAATFGYSRVV
GILLDNGANATVGNENGPMALHGSAQGGHLAVTKLLLKADADLEAKTADV
GPADPGCTPLHLAAERGHLKAGRSCSPRTTRLLVDAGADTTTVVRVAGMG
GEVVFDDMPQALAEMFLSDKMVQGKDATESQLHSLEANRRLPMRVEAVHA
VSWLWASDVPSVTHAATEGTVRATGATLTPLASMLPILRRRAGRPRVLLA
TLFRHSKRP*
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mRNA from alignment at L-elsbetiae_contig1694:11142..13677+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1694.4655.1 ID=mRNA_L-elsbetiae_contig1694.4655.1|Name=mRNA_L-elsbetiae_contig1694.4655.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2536bp|location=Sequence derived from alignment at L-elsbetiae_contig1694:11142..13677+ (Laminarionema elsbetiae ELsaHSoW15)
CTCTAGCTGACCACGTCTCTCATGTCGGCCCGTCTCACTGGGGACTACGC AGAAGCAGGCACGAAAACAGCACGTGCACTAGGTATAGTTTCGATGTCAC GCAGCCCCCAAAGCCACCCTGACACGCTCCCCTGCCACTGCTGCTGTTCC CTGCCGTCCCTGCCGAAGTAGACGAATCGATTCTTCTCGCCGAAACGGTT CTAGAACCGTTCTCAGTTTGTGCCTACTTTCTAGTATACGATCTACGACC CGAACTCCAAAGTTATAGAACTGTCCGCTCAATCTCGAAAAGGGCCAAAA ACGAACAATAGCCTCGACAACGAACACCGCGTGTCGGTTTGGTGATCATA GTCCCCCGCAAGATTGACCCTAGGGTTGCTATGTATGAACTGCACAAGGC CGCGCTTTGTGGCTCCACCGAGCGTACCGTAGCCCTCGTCTCGAGGGGAG TGATTGGCGTCGATGAAGGAACACCGGATAGCTTCACCCCTCTAATGATC GCCGCCACCTTCGGTTACTCGCGAGTTGTCGGGATCCTTCTGGACAACGG AGCCAACGCGACAGTAGGGAATGAGAACGGGCCTATGGCTCTGCATGGTT CGGCTCAAGGAGGACACCTGGCCGTGACGAAGCTGCTGCTGAAGGCCGAT GCAGACCTGGAAGCAAAGACCGCTGATGTGGGTCCGGCGGATCCAGGCTG CACACCGCTTCATTTGGCTGCGGAACGAGGGCACTTGAAGGTGATGAGAG TGCTAGTCGGGGCGGGGGCGAATCTCAATAGCCGAAAGTCGAATGGATCG ACACCTCTGTACAGCGCGGCTCGCTTCGGACGGGTGGATGCTGTCAAGGT GCTGCTTCGTGCGAAAGCAAACCCGCTGTTGGCCCGTTCGGATCCGCCGG GGTATTCGCGTGTCCCTCTGGACGTGGCGGCGCAAAGGGGGCACTTGAAG GTGGTACGCGAGCTGATCCAGGAGCATGGGATCGAGGGTTGTGGTGGTGG TGTTGTGTAACTGCTCTCAAACTAGCTGCATTGACCTAGCAGTTGGAAAT CGTGGGGGTGCTGACCAGCATCGGAGTGGTCGATACGGGTAGAGCCCTGC GCACCGCCGCCACCTATGGCCGCGAGTCATCCGTGGAGATTCTGTTGCAG CAGCAAGAGAGGAACTCTAGCGGCCAACAAGCTAGCTACCTAGACACCTG CAACCCATCCGGTGCAACGTCCTTGGTTTGTTACATTCAGGCTGGCCGCT CATGCTCTCCGAGAACTACGAGGTTGCTCGTGGATGCGGGAGCGGACACC ACAACGGTCGTTCGAGTAGCAGGCATGGGAGGTGAAGTGGTTTTCGATGA TATGCCCCAAGCCCTCGCGGAGATGTTCCTCAGCGACAAGATGGTCCAAG GGAAGGATGCGACAGAGAGCCAGCTCCACAGCCTGGAGGCTAACCGGCGG TTGCCGATGAGGGTGGAGGCCGTTCATGCGGTCTCTTGGTTATGGGCAAG CGACGTCCCCTCCGTCACCCACGCTGCTACAGAGGGTACAGTCAGAGCTA CTGGGGCGACTCTGACCCCGTTGGCATCGATGTTACCGATCTTGCGGCGA AGGGCTGGAAGGCCCAGGGTGCTCTTGGCCACCCTGTTCAGGTGGGTGGT GTGATGTTCGAAGGTTCTTTGCTTGCCGTGGCCTTTTGGCGTCGTCGTAC TGTTCTCTGTGGCAAGTGGTTGATGCAGGCGGCTATCGTGTCAACGTTGC CACTATCGATGAGCTGCCATTTCTCTCTCAGTGTTTCCTCACAGTACTTG TGAATGTCTGAGCACCAAGTGTCGCCGTGGCTTGCCGTGCCGTCTCTCGA ATACTTTCTCAAAGTCAGAGCTTCCAACTTGCTTATCTCGGGGAAATATT ATGGCACTCCTTGTGTTGATGTTGTTCGCAGAATACTGGCAAGTTTTCAC ACCCATTTCGCTCTTCTGAGTGTTGAGGCACAACATCAGTGTACAAAATA TGTGTCCTCAGTGCCGGCCCCCACCGTTGTCTGTCCGGTTTGTTTTCGTC CGTCCCCTTGTTTCGCGTGCTGCTGTTGTTGCAGGCATTCGAAAAGGCCT TGATTGCGATCGGTCTGCAGGATGGGAAGAGCGATTCTTCTTGGCAGTCT TGATTCGCGGTCGGATGGAACGATACGCGGGCCACTACAGGAGGAGTTGT GCAGTCAGCAACACCACCCCAGCTTTGCCCGAGAAAAGTAGCTGTGGGTA GAGTTGCTGAGATACTTGAAAGGTACGGCAGTGCTCGCAGCTTGCGCCAA CCAGTAATACCGTTCTAAGTACGCGCATTGGCATAGAGCGGAGCAAAAGT ATCTTCATACGAAGTAAGTCGTTTACTTGCTCCTAAATGCAATCTGAGGC CACGTTAAGGAACACTGTTCCGTATTTCATTGGCAAAAAGCATGCAGGCG ATTATGAAGCAGCCACAGCGCCTCGCCGCCCACGCGCTCAACCATCCCGC GACATGACGGGCTTGATCCTGTTGCCTGTACAACCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1694:11142..13677+

>mRNA_L-elsbetiae_contig1694.4655.1 ID=mRNA_L-elsbetiae_contig1694.4655.1|Name=mRNA_L-elsbetiae_contig1694.4655.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1560bp|location=Sequence derived from alignment at L-elsbetiae_contig1694:11142..13677+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTATGAACTGCACAAGGCCGCGCTTTGTGGCTCCACCGAGCGTACCGT
AGCCCTCGTCTCGAGGGGAGTGATTGGCGTCGATGAAGGAACACCGGATA
GCTTCACCCCTCTAATGATCGCCGCCACCTTCGGTTACTCGCGAGTTGTC
GGGATCCTTCTGGACAACGGAGCCAACGCGACAGTAGGGAATGAGAACGG
GCCTATGGCTCTGCATGGTTCGGCTCAAGGAGGACACCTGGCCGTGACGA
AGCTGCTGCTGAAGGCCGATGCAGACCTGGAAGCAAAGACCGCTGATGTG
GGTCCGGCGGATCCAGGCTGCACACCGCTTCATTTGGCTGCGGAACGAGG
GCACTTGAAGATGTATGAACTGCACAAGGCCGCGCTTTGTGGCTCCACCG
AGCGTACCGTAGCCCTCGTCTCGAGGGGAGTGATTGGCGTCGATGAAGGA
ACACCGGATAGCTTCACCCCTCTAATGATCGCCGCCACCTTCGGTTACTC
GCGAGTTGTCGGGATCCTTCTGGACAACGGAGCCAACGCGACAGTAGGGA
ATGAGAACGGGCCTATGGCTCTGCATGGTTCGGCTCAAGGAGGACACCTG
GCCGTGACGAAGCTGCTGCTGAAGGCCGATGCAGACCTGGAAGCAAAGAC
CGCTGATGTGGGTCCGGCGGATCCAGGCTGCACACCGCTTCATTTGGCTG
CGGAACGAGGGCACTTGAAGGCTGGCCGCTCATGCTCTCCGAGAACTACG
AGGTTGCTCGTGGATGCGGGAGCGGACACCACAACGGTCGTTCGAGTAGC
AGGCATGGGAGGTGAAGTGGTTTTCGATGATATGCCCCAAGCCCTCGCGG
AGATGTTCCTCAGCGACAAGATGGTCCAAGGGAAGGATGCGACAGAGAGC
CAGCTCCACAGCCTGGAGGCTAACCGGCGGTTGCCGATGAGGGTGGAGGC
CGTTCATGCGGTCTCTTGGTTATGGGCAAGCGACGTCCCCTCCGTCACCC
ACGCTGCTACAGAGGGTACAGTCAGAGCTACTGGGGCGACTCTGACCCCG
TTGGCATCGATGTTACCGATCTTGCGGCGAAGGGCTGGAAGGCCCAGGGT
GCTCTTGGCCACCCTGTTCAGGCTGGCCGCTCATGCTCTCCGAGAACTAC
GAGGTTGCTCGTGGATGCGGGAGCGGACACCACAACGGTCGTTCGAGTAG
CAGGCATGGGAGGTGAAGTGGTTTTCGATGATATGCCCCAAGCCCTCGCG
GAGATGTTCCTCAGCGACAAGATGGTCCAAGGGAAGGATGCGACAGAGAG
CCAGCTCCACAGCCTGGAGGCTAACCGGCGGTTGCCGATGAGGGTGGAGG
CCGTTCATGCGGTCTCTTGGTTATGGGCAAGCGACGTCCCCTCCGTCACC
CACGCTGCTACAGAGGGTACAGTCAGAGCTACTGGGGCGACTCTGACCCC
GTTGGCATCGATGTTACCGATCTTGCGGCGAAGGGCTGGAAGGCCCAGGG
TGCTCTTGGCCACCCTGTTCAGGCATTCGAAAAGGCCTTGAGCATTCGAA
AAGGCCTTGA
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