mRNA_L-elsbetiae_contig1694.4655.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: D7FSU4_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSU4_ECTSI) HSP 1 Score: 147 bits (372), Expect = 8.040e-37 Identity = 110/287 (38.33%), Postives = 154/287 (53.66%), Query Frame = 3 Query: 369 PRVAMYELHKAALCGSTERTVALVSRGVIGVDEGTPDS-FTPLMIAATFGYSRVVGILLDNGANATVGNENGPMALHGSAQGGHLAVTKLLLKADADLEAKTADVG------PADPGCT------------PLHLAAERGHLKAGRS-----CSPRTTRLLVDAGADTTTVVRVAGMGGEVVFDDMPQALAEMFLSDKMVQGKDA---TESQLHSLEANRRLPMRVEAVHAVSWLWASDVPSVTHAATEGTVR--ATGATLTPLASMLPILRRRAGRPRVLLATLFR 1142 PR LH+AA G E AL++ +D G + +T LMIA+ GYS +V +LL GA ++ + +G LH S GH+AVTK L++A A LE T + AD GC PL +AA+ GH + + C PR +LLV+AGADTT+ V V+ G+ ++ + L+ +++ G+ TE QL L+A RRL +RVEAVHAVSWLW++D+ ++TH+ GT R AT T TPL M+ RRR R V L+ L R Sbjct: 11 PRGPKNSLHEAADYGFFETAAALLASDAFDIDLGEDEGGWTALMIASHRGYSLIVRMLLSKGAQVSIADVHGDSGLHLSVLAGHMAVTKTLVEAGAPLEVATKQLLCTPLHLAADNGCIESITTSLEADVPPLDMAAQNGHAEVVQELIRQHCRPRVGQLLVEAGADTTSAVPVSKHFGK-------DSVTPLGLTMRLLDGRSTYPLTEEQLKKLKAIRRLLLRVEAVHAVSWLWSTDISTITHSTAHGTDRTIATSTTGTPLMLMM---RRRTKRREVPLSALLR 287
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 122 bits (305), Expect = 5.090e-28 Identity = 82/181 (45.30%), Postives = 101/181 (55.80%), Query Frame = 3 Query: 696 GCTPLHLAAERGHLKAGRSCSPRTTRLLVDAGADTTTVVRVAGMGGEVVFDDMPQALAEMFLSDKMVQGKDATESQLHSLEANRRLPMRVEAVHAVSWLWASDVPSVTHAATEGTVRATGAT--LTPLASMLPILRRRAGRPRVLLATLFRHSKRP*LRSVCRMGRAILLGSLDSRSDGTI 1232 G TPL + E +G +PR RLLVDAGADTT+ VRV + G V ++D P A+ L +K+V GK ATE QLH L+A RRL +RV+AVHAVSWLW SD PS+ HA R+ G PL+ LPIL+RRA V +ATL R S GR L GT+ Sbjct: 62 GMTPLSCSIE--WCSSG---NPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVE----RSCGPEPRRPPLSLTLPILKRRAKTCHVFVATLLRSSP-------ISSGRGSRRADLSKEKAGTV 226
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 115 bits (288), Expect = 3.780e-24 Identity = 99/264 (37.50%), Postives = 134/264 (50.76%), Query Frame = 3 Query: 375 VAMYELHKAALCGSTERTVALVSRGVIGVDEGTPDSFTPLMIAATFGYSRVVGILLDNGANATVGNENGPMALHGSAQGGHLAVTKLLLKADADLEAKTADVGPADP-GCTPLHLAAERGHLKAGRSCSPRTTRLLVDAGADTTTVVRVAGMGGE-VVFDDMPQALAEMFLSDKMVQGKDATESQLHSLEANRRLPMRVEAVHAVSWLWAS-DVPSVTHAATEG-TVRATGATLTPLASMLPILRRRAGRPRVLLATLFRHSKR 1154 V+ L AAL G+ + ++ + I G L AA + + +LLD G + GP + + G +AV LL + AD +A G DP G TP+ A + G AGR CSP+ RLLVDAGA+TT V V + + P A L + V G+ AT+ QL L+ R L R EAVHAVSWLWAS + P + AA + T A+ A TPL +M P+LRR+ G VLL TLFR+S++ Sbjct: 181 VSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVV----DTGPALILAAENGRAVAVKFLLRRRQADADAYVN--GTRDPYGRTPVMCAVDVG---AGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 105 bits (263), Expect = 5.080e-21 Identity = 87/256 (33.98%), Postives = 124/256 (48.44%), Query Frame = 3 Query: 390 LHKAALCGSTERTVALVSRGVIGVDEGTPDSFTPLMIAATFGYSRVVGILLDNGANATVGNENGPMALHGSAQGGHLAVTKLLLKADADL-EAKTADVGPADPGCTPLHLAAERGHLKAGRSCSPRTTRLLVDAGADTTTVVRVAGMGGEVVFDDMPQALAEMFLSDKMVQGKDATESQLHSLEANRRLPMRVEAVHAVSWLWASDVPSVTHAATEGTVRATGATLTPLASMLPILRRRAGRPRVLLATLFRHSKR 1154 L AA G + L+ I G L +AA +G ++ +L+D G VG +AL + G A LL+ + + ++ D G T L L + RG+ + C+PR TR LVDAGADTT+ V++ + P + + AT+ QL LEA RR+ +RV AVHAVSW+W SD P + A R + T L ++LP+LRRRAGR +L TLFR+SK+ Sbjct: 160 LEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVG-----LALLAAVGSGKEAAVGFLLRQQEERWQTSYVNIARDDDGLTAL-LWSFRGNKN--KPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSP--RTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRYSKK 405
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI) HSP 1 Score: 102 bits (254), Expect = 6.590e-20 Identity = 111/392 (28.32%), Postives = 147/392 (37.50%), Query Frame = 3 Query: 369 PRVAMYELHKAALCGSTERTVALVSRGVIGVDEGTPDSFTPLMIAATFGYSRVVGILLDNGANATVGNENGPMALHGSAQGGHLAVTKLLLKADADLEAKTADVGPADPGCTPLHLAAERGH-------------LKAGR-------------------------SCSPRTTRLLVD----------AGADTTTVVR-------VAGMGG-------------EVVFDDMP--------------------------------------------------------------QALAEMFLSDKMVQGKDATESQLHSLEANRRLPMRVEAVHAVSWLWASDVPSVTHAATEGTVRATGATLTPLASMLPILRRRAGRPRVLLATLFRHSKR 1154 PR ELH AA GST+RT A++S G+I +++G PD +TPLM+A+ GY+R+V IL+ GAN + + G A A ADLEA T+ G PLHLAA++GH L + R P RL V AG + VVR + G GG E D M + L + +L + V G+D TE Q H L A RL +RVEAVHA SWLW SD P + H A E T R T T +P + M P+L + R LL+ + R+S + Sbjct: 10 PRGPKNELHFAADTGSTQRTAAILSSGLININQGDPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNAGADLEAATST-----NGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLLIRLNVSRDRFVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDTGIALIGAIKENREGSIKFLLRQQQLQGNPTGAYVDEARDPFGRTPLLCSIEDEGLVDHYLGENRVIGRDITEEQAHKLNAVHRLLLRVEAVHAASWLWVSDAPDIAHTA-EVTKR-TKVTPSPRSRMFPVLGL-STRRNALLSAVLRYSSK 393
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 103 bits (257), Expect = 7.870e-20 Identity = 98/259 (37.84%), Postives = 130/259 (50.19%), Query Frame = 3 Query: 390 LHKAALCGSTERTVALVSR-GVIGVDEGTPDSFTPLMIAATFGYSRVVGILLDNGANATVGNENGPMALHGSAQGGHLAVTKLLLK---ADADLEAKTADVGPADP-GCTPLHLAAERGHLKAGRSCSPRTTRLLVDAGADTTTVVRVAGMGGEVVFDDMPQALAEMFLSDKMV-QGKDATESQLHSLEANRRLPMRVEAVHAVSWLWASDVPSVTHAATEGTVRATGATLTPLASMLPILRRRAGRPRVLLATLFRHS 1148 L AA G T+ L+ G+ G D T L AA+ + ++ IL + G T AL+ +A GH A K LL+ + + A + D G TPL + + +A PR R+LVDAGADTT+ V+V + G VVF+D P A ++ L K+V GK AT+ L LEA RL +RV+AVHAVSWLW S P + A T L L MLPIL+RR R L+ATL R+S Sbjct: 282 LDLAAKHGHTDVVRELIQELGIEGCD-ATSAGAHALAFAASNQHLDIMAILTEAGVVDT------GKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQA-----PRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRA----TETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYS 524
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 100 bits (249), Expect = 4.410e-19 Identity = 92/252 (36.51%), Postives = 121/252 (48.02%), Query Frame = 3 Query: 480 SFTPLMIAATFGYSRVVGILLDN-GANATVGNENGPMALHGSAQGGHLAVTKLLLKADADLEAKTADVGPADPGCTPLHLAAERGHLKAG----------------------RSCSPRTTRLLVDAGADTTTVVRVAG-MGGEVVFDDMPQALAEMFLSDKM-VQGKD-ATESQLHSLEANRRLPMRVEAVHAVSWLWASDVPSVTHAATEGTVRATGATLTPLASMLPILRRRAGRPRVLLATLFRHSKRP 1157 +F PL AA G+ VV L+ G + G+ G AL +AQ +L + +L A V G TPL E+ + + PR RLLV+AGADTT+ V V +GG+ V P L + DK+ V G+ A+ QLH LEA RRL +RVEAVHAVSWLW SD+ ++T AA GT R T + ML + RRRA +V LA L R+S +P Sbjct: 186 TFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDV-SITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPML-VTRRRARGRKVPLAALLRYSSKP 435
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 2.950e-18 Identity = 89/251 (35.46%), Postives = 113/251 (45.02%), Query Frame = 3 Query: 477 DSFTPLMIAATFGYSRVVGILLDN-GANATVGNENGPMALHGSAQGGHLAVTKLLLKADADLEAKTADVGPADPGCTPLHLAAE--RGHLKAGRS--------------------CSPRTTRLLVDAGADTTTVVRVAGMGGEVVFDDMPQALAEMFLSDKMVQGKDATESQLHSLEANRRLPMRVEAVHAVSWLWASDVPSVTHAATEGTVR--ATGATLTPLASMLPILRRRAGRPRVLLATLFRHSKR 1154 + F PL +AA G+ VV L+ G + G+ G AL +A L + +L A V G PL E RG R+ C PR +LLV+AGADTT+ V + GE F P L L + K T + + LE RRL +R EAVHAVSWLW SD P++THA +GT R AT TP ML I RR GR + LLA L R+S + Sbjct: 185 ERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGR--SAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFI-MLMIGRRTRGR-KGLLAALLRYSSK 431
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 3.700e-18 Identity = 98/260 (37.69%), Postives = 130/260 (50.00%), Query Frame = 3 Query: 390 LHKAALCGSTERTVALVSR-GVIGVDEGTPDSFTPLMIAATFGYSRVVGILLDNGANATVGNENGPMALHGSAQGGHLAVTKLLLKADADLEA-KTADVG-PADP-GCTPLHLAAERGHLKAGRSCSPRTTRLLVDAGADTTTVVRVAGMGGEVVFDDMPQALAEMFLSDKMVQGKDATESQLHSLEANRRLPMRVEAVHAVSWLWASDVPSVTHAA--TEGTVRATGATLTP-LASMLPILRRRAGRPRVLLATLFRHS 1148 L AA G + L+ R G+ G GT T L +AA + V+ L T G + +AL + GH+ V K LL+ + K+A V P DP G TPL + G +SCSP+ RLLVDAGADTT++VR G + P +LA L K+ K + L LE RRL +RVEAVHA SWLW + VP V A T T + +T P L ++LPILRRRA + A+L R++ Sbjct: 187 LDTAAQNGRLGVVLELLQRFGIRGCGGGT-GGVTALQLAAMKPHMDVMLAL------TTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVG---LNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYA 436
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Match: D8LNF8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF8_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 4.980e-18 Identity = 64/129 (49.61%), Postives = 81/129 (62.79%), Query Frame = 3 Query: 351 VPRKIDPRVAMYELHKAALCGSTERTVALV-SRGVIGVDEGTPDSFTPLMIAATFGYSRVVGILLDNGANATVGNENGPMALHGSAQ-GGHLAVTKLLLKADADLEAKTADVGPADPGCTPLHLAAERG 731 VP + PR +LH+AA GS ER VAL+ SR I +++G +TPLM+AA G SRVV IL + GAN +V ++ ALH S Q GGH VTK+LLKA AD EA T++ G TPLHL A+ G Sbjct: 6 VPAQPWPRGPQNDLHRAANDGSIERVVALLASRPSIDINQGAEYGWTPLMLAAWRGSSRVVRILPNKGANVSVVADDFHTALHFSTQDGGHPVVTKMLLKAGADFEAVTSE------GETPLHLVADSG 128 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1694.4655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1694.4655.1 >prot_L-elsbetiae_contig1694.4655.1 ID=prot_L-elsbetiae_contig1694.4655.1|Name=mRNA_L-elsbetiae_contig1694.4655.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=260bp MYELHKAALCGSTERTVALVSRGVIGVDEGTPDSFTPLMIAATFGYSRVVback to top mRNA from alignment at L-elsbetiae_contig1694:11142..13677+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1694.4655.1 ID=mRNA_L-elsbetiae_contig1694.4655.1|Name=mRNA_L-elsbetiae_contig1694.4655.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2536bp|location=Sequence derived from alignment at L-elsbetiae_contig1694:11142..13677+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1694:11142..13677+ >mRNA_L-elsbetiae_contig1694.4655.1 ID=mRNA_L-elsbetiae_contig1694.4655.1|Name=mRNA_L-elsbetiae_contig1694.4655.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1560bp|location=Sequence derived from alignment at L-elsbetiae_contig1694:11142..13677+ (Laminarionema elsbetiae ELsaHSoW15)back to top |