mRNA_L-elsbetiae_contig16848.4597.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig16848.4597.1
Unique NamemRNA_L-elsbetiae_contig16848.4597.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: D8LG69_ECTSI (Glutaminyl-tRNA synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG69_ECTSI)

HSP 1 Score: 311 bits (796), Expect = 1.750e-101
Identity = 165/237 (69.62%), Postives = 178/237 (75.11%), Query Frame = 1
Query:    1 GRLAGPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711
            G L GPLDGIPYAAKDNFCTLGVQTTASSAALAGF PPYDST T RLR+ G  L+GKTNMDEFGMGSGTLFS++GRTLNPWSP   G                       V+SG  FAALGSDTGGSVRQPAAFCGVVGLKPTYGL+ RHGLIAYASSLDTPGVLARS+LD+AMVLD +AGPD +DSTCIPAG  R+G                + SSWPLEGVTVGIP +FNVEEL
Sbjct:   87 GTLTGPLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQVGSILMGKTNMDEFGMGSGTLFSEYGRTLNPWSPESPGDEKNTEAPFLVPGGSSGGSAAA-VSSGCSFAALGSDTGGSVRQPAAFCGVVGLKPTYGLIPRHGLIAYASSLDTPGVLARSILDAAMVLDVVAGPDSRDSTCIPAGKGRAGGGGFASDLLGAAAAG-SSSSWPLEGVTVGIPKEFNVEEL 321          
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: A0A6H5KIR5_9PHAE (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIR5_9PHAE)

HSP 1 Score: 308 bits (789), Expect = 7.790e-99
Identity = 166/237 (70.04%), Postives = 177/237 (74.68%), Query Frame = 1
Query:    1 GRLAGPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711
            G L GPLDGIPYAAKDNFCTLGVQTTASSAALAGF PPYDST T RLR+AG  L+GKTNMDEFGMGSGTLFS++GRTLNPWS    G                       V+SG  FAALGSDTGGSVRQPAAFCGVVGLKPTYGL+ RHGLIAYASSLDTPGVLARSVLD+AMVLD +AGPD KDSTCIPAG   +G                + SSWPLEGVTVGIP +FNVEEL
Sbjct:   66 GTLTGPLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQAGSILMGKTNMDEFGMGSGTLFSEYGRTLNPWSRESPGDEENTEAPFFVPGGSSGGSAAA-VSSGCSFAALGSDTGGSVRQPAAFCGVVGLKPTYGLIPRHGLIAYASSLDTPGVLARSVLDAAMVLDVVAGPDPKDSTCIPAGKGHAGGGGFASDLLKAAAAG-SSSSWPLEGVTVGIPKEFNVEEL 300          
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: W7TVN2_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVN2_9STRA)

HSP 1 Score: 225 bits (574), Expect = 1.200e-66
Identity = 126/235 (53.62%), Postives = 148/235 (62.98%), Query Frame = 1
Query:    7 LAGPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711
            + GPL GIP A KDNFCT GV+TTASS  LA F PPY +TA +RL  +G  ++GKTNMDEFGMGS TLFS  G+T+NPWS                            VA+G+  AALGSDTGGSVRQPAAFCG+VGLKPTYG VSRHGLIAYASSLD PGVL R+V D+A+VLD +AG D  DSTC+    R                   A  +  L G+ VGIP +F ++EL
Sbjct:  134 MKGPLHGIPIAVKDNFCTAGVRTTASSRMLANFVPPYSATAVSRLEASGAIVVGKTNMDEFGMGSATLFSHFGKTINPWSQAA-----EKGDKPRLAAGGSSGGSAVAVATGSALAALGSDTGGSVRQPAAFCGLVGLKPTYGRVSRHGLIAYASSLDCPGVLTRTVADAALVLDVVAGRDPLDSTCLEQPHR----PCFDRTMEAAASSRAAGLAVSLRGLKVGIPAEFAIQEL 359          
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: A0A6A3H2L6_9STRA (Amidase domain-containing protein (Fragment) n=4 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3H2L6_9STRA)

HSP 1 Score: 214 bits (544), Expect = 1.290e-64
Identity = 131/237 (55.27%), Postives = 151/237 (63.71%), Query Frame = 1
Query:    1 GRLAGPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711
            G+  G LDGIP   KD FCT  + TTA S  L GF  PY+STAT RL   G   LGK NMDEF MGSGTL+S  G T+NPWS  +G               XXXXXXXXX   G CFAALGSDTGGSVRQPAA+CG+VGLKP+YG VSRHG+I+YASSLDTPG+ ARSV D+A+VL AIAGPD  DSTC+      +                   S+  L GV VG+P ++ VEEL
Sbjct:  115 GKARGLLDGIPVGIKDIFCTTNLATTAGSKVLEGFVSPYESTATQRLLDQGTVPLGKLNMDEFAMGSGTLYSKFGATINPWSKDLG--------DNAVVAGXXXXXXXXXXXXGCCFAALGSDTGGSVRQPAAYCGIVGLKPSYGRVSRHGMISYASSLDTPGIFARSVGDAAVVLKAIAGPDHMDSTCMTESLPEN-------WCSNTVEASQQSSTVDLTGVRVGVPAEYFVEEL 336          
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: G5AEQ2_PHYSP (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=5 Tax=Phytophthora TaxID=4783 RepID=G5AEQ2_PHYSP)

HSP 1 Score: 218 bits (554), Expect = 2.800e-64
Identity = 133/237 (56.12%), Postives = 153/237 (64.56%), Query Frame = 1
Query:    1 GRLAGPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711
            G+  G LDGIP A KD FCT  + TTA S  L GF PPY+STAT RL   G   LGK NMDEF MGS TL+S  G T+NPWS  +G               XXXXXXXXX ASG CFAALGSDTGGSVRQPAA+CG+VGLKP+YG VSRHG+I+YASSLDTPG+ ARSV D+A+VL AIAGPD  DSTC+      +                    +  L GV VG+P ++ VEEL
Sbjct:   85 GKARGLLDGIPVAFKDIFCTKNLTTTAGSKVLEGFVPPYESTATQRLLDQGAVPLGKLNMDEFAMGSATLYSKFGATINPWSKDLG--------DGAVVAGXXXXXXXXXXASGCCFAALGSDTGGSVRQPAAYCGIVGLKPSYGRVSRHGMISYASSLDTPGIFARSVGDAAVVLKAIAGPDHMDSTCMTDALPEA-------WCSNTVEASQQSKNVDLTGVRVGVPAEYFVEEL 306          
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: A0A6A5AUD5_9STRA (Amidase domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AUD5_9STRA)

HSP 1 Score: 211 bits (538), Expect = 3.350e-64
Identity = 116/192 (60.42%), Postives = 130/192 (67.71%), Query Frame = 1
Query:    1 GRLAGPLDGIPYAAKDNFCTL-GVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIP 573
            GR  GPLDGIP   KD FC   GV TTASS  L GF  PY+STAT RL  AG   LGK NMDEF MGSGT +S  G T+NPWS  +G                        VASG CFAALGSDTGGSVRQPAA+CGV GLKP YG +SRHG+IA+ASSLDTPG+LA++V D+A+VL AIAGPD  DST +P
Sbjct:   82 GRARGPLDGIPVGVKDIFCMQNGVPTTASSKILQGFVAPYESTATQRLLDAGAIPLGKLNMDEFAMGSGTTYSTFGPTINPWSSDLG--------DRALVAGGSSGASAAAVASGCCFAALGSDTGGSVRQPAAYCGVTGLKPNYGRISRHGMIAFASSLDTPGILAKTVRDAAIVLHAIAGPDGHDSTALP 265          
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: A0A425CN69_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CN69_9STRA)

HSP 1 Score: 215 bits (547), Expect = 4.780e-63
Identity = 132/233 (56.65%), Postives = 150/233 (64.38%), Query Frame = 1
Query:   13 GPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711
            G LDGIP   KD FC   + TTASS  L GF  PY+STAT RL   G  LLGK NMDEF MGSGTL+S  G T+NPWS G+G               XXXXXXXXX ASG CFAALGSDTGGSVRQPAA+CG+VGLKP+YG VSR+G+I+YASSLDTPG+ ARSV D+A+VL AIAGPD  DSTCI                              L GV VG+P ++ V+EL
Sbjct:  111 GLLDGIPMGVKDLFCMRNMPTTASSKILEGFVSPYESTATQRLLNQGAVLLGKLNMDEFAMGSGTLYSKFGATINPWSKGLG--------DKAVVAGXXXXXXXXXXASGCCFAALGSDTGGSVRQPAAYCGIVGLKPSYGRVSRYGMISYASSLDTPGIFARSVGDAAIVLKAIAGPDPMDSTCIT-------DTLPDNWCSNTVQSSKQSKKVDLTGVRVGVPAEYFVKEL 328          
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: W2KJ73_PHYPR (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KJ73_PHYPR)

HSP 1 Score: 210 bits (535), Expect = 8.570e-63
Identity = 132/237 (55.70%), Postives = 148/237 (62.45%), Query Frame = 1
Query:    1 GRLAGPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711
            G   G LDGIP   KD FC   V TTASS  L  F  PY+STAT RL   G   LGK NMDEF MGSGT++S  G T+NPWS  +G               XXXXXXXXX ASG CFAALGSDTGGSVRQPAA+CGVVGLKP+YG VSRHG+I+YASSLDTPGV ARSV D+A+VL AIAGPD  DSTC+                              L GV VG+P ++ V+EL
Sbjct:   91 GHSLGLLDGIPVGVKDLFCMENVPTTASSKILENFLSPYESTATQRLLDQGAVPLGKLNMDEFAMGSGTIYSKFGATINPWSKDLG--------DNAVVAGXXXXXXXXXXASGCCFAALGSDTGGSVRQPAAYCGVVGLKPSYGRVSRHGMISYASSLDTPGVFARSVGDAAVVLQAIAGPDHMDSTCMT-------DELPENWCSNTVETSQQSKQVDLTGVRVGVPAEYFVKEL 312          
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: A0A3R7JHL1_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JHL1_9STRA)

HSP 1 Score: 213 bits (541), Expect = 1.430e-62
Identity = 131/237 (55.27%), Postives = 152/237 (64.14%), Query Frame = 1
Query:    1 GRLAGPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711
            G+  G LDGIP   KD FC   V+TTA+S  L GF  PY+STAT RL + G   LGK NMDEF MGSGTL+S  G T+NPWS  I                XXXXXXXXX ASG CFAALGSDTGGSVRQPAA+CG+VGLKP+YG VSRHG+I+YASSLDTPG+ ARSV D+A+VL AIAGPD  DSTC+      +                       L GV VG+P ++ V+EL
Sbjct:   90 GQSLGLLDGIPVGVKDLFCMENVETTAASKILEGFVSPYESTATERLLQNGAVPLGKLNMDEFAMGSGTLYSKFGATINPWSKDIA--------QGAVVAGXXXXXXXXXXASGCCFAALGSDTGGSVRQPAAYCGIVGLKPSYGRVSRHGMISYASSLDTPGIFARSVGDAAVVLKAIAGPDHMDSTCMTDALPEN-------WCANTVEASRNSKEVDLTGVRVGVPAEYYVDEL 311          
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: W4H4Y8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4Y8_9STRA)

HSP 1 Score: 212 bits (539), Expect = 4.060e-62
Identity = 122/238 (51.26%), Postives = 144/238 (60.50%), Query Frame = 1
Query:    1 GRLAGPLDGIPYAAKDNFCTL-GVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711
            GR  GPLDGIP   KD FC   GV TTASS  L GF  PY+STAT RL  AG   LGK NMDEF MGSGT +S  G T+NPWS  +G                        VASG CFAALGSDTGGSVRQPAA+CGV GLKP YG +SRHG+IA+ASSLDTPG+LA+++ D+A+VL AIAGPD  DST +P                          +   + +TVG+P ++ V+EL
Sbjct:   82 GRACGPLDGIPVGVKDIFCMQNGVPTTASSKILQGFVAPYESTATQRLLDAGAIPLGKLNMDEFAMGSGTTYSTFGPTINPWSSDLG--------DRALVAGGSSGASAAAVASGCCFAALGSDTGGSVRQPAAYCGVTGLKPNYGRISRHGMIAFASSLDTPGILAKTIRDAAIVLHAIAGPDGHDSTALP------------DKLPSQWEPASETDATNTKQLTVGVPKEYYVKEL 299          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG69_ECTSI1.750e-10169.62Glutaminyl-tRNA synthase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KIR5_9PHAE7.790e-9970.04Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
W7TVN2_9STRA1.200e-6653.62Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A6A3H2L6_9STRA1.290e-6455.27Amidase domain-containing protein (Fragment) n=4 T... [more]
G5AEQ2_PHYSP2.800e-6456.12Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A6A5AUD5_9STRA3.350e-6460.42Amidase domain-containing protein n=2 Tax=Aphanomy... [more]
A0A425CN69_9STRA4.780e-6356.65Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
W2KJ73_PHYPR8.570e-6355.70Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A3R7JHL1_9STRA1.430e-6255.27Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
W4H4Y8_9STRA4.060e-6251.26Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16848contigL-elsbetiae_contig16848:846..3092 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score313.2
Seed ortholog evalue1.1e-82
Seed eggNOG ortholog2880.D8LG69
KEGG rclassRC00010
KEGG koko:K02433
KEGG ReactionR03905,R04212
KEGG Pathwayko00970,ko01100,map00970,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln)
EggNOG OGsCOG0154@1,KOG1211@2759
EC6.3.5.6,6.3.5.7
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029
Ec32 ortholog descriptionglutaminyl-tRNA synthase
Ec32 orthologEc-17_003970.1
Exons3
Model size711
Cds size711
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16848.4597.1prot_L-elsbetiae_contig16848.4597.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig16848 846..3092 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815699.783314-CDS-L-elsbetiae_contig16848:845..10791622815699.783314-CDS-L-elsbetiae_contig16848:845..1079Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16848 846..1079 -
1691683046.0415785-CDS-L-elsbetiae_contig16848:845..10791691683046.0415785-CDS-L-elsbetiae_contig16848:845..1079Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16848 846..1079 -
1622815699.799437-CDS-L-elsbetiae_contig16848:1770..19931622815699.799437-CDS-L-elsbetiae_contig16848:1770..1993Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16848 1771..1993 -
1691683046.0617156-CDS-L-elsbetiae_contig16848:1770..19931691683046.0617156-CDS-L-elsbetiae_contig16848:1770..1993Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16848 1771..1993 -
1622815699.8149898-CDS-L-elsbetiae_contig16848:2838..30921622815699.8149898-CDS-L-elsbetiae_contig16848:2838..3092Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16848 2839..3092 -
1691683046.0704262-CDS-L-elsbetiae_contig16848:2838..30921691683046.0704262-CDS-L-elsbetiae_contig16848:2838..3092Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16848 2839..3092 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig16848.4597.1

>prot_L-elsbetiae_contig16848.4597.1 ID=prot_L-elsbetiae_contig16848.4597.1|Name=mRNA_L-elsbetiae_contig16848.4597.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=237bp
GRLAGPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRA
GCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGGGGGECSEAFFVP
GGSSGGSAAAVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRH
GLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGGG
GFASGLIGAAAAAAADSSWPLEGVTVGIPTDFNVEEL
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mRNA from alignment at L-elsbetiae_contig16848:846..3092-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig16848.4597.1 ID=mRNA_L-elsbetiae_contig16848.4597.1|Name=mRNA_L-elsbetiae_contig16848.4597.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2247bp|location=Sequence derived from alignment at L-elsbetiae_contig16848:846..3092- (Laminarionema elsbetiae ELsaHSoW15)
GGACGCCTCGCCGGCCCCCTGGACGGCATCCCGTACGCCGCCAAGGACAA CTTCTGCACTCTCGGGGTCCAGACGACGGCGTCCTCCGCCGCCCTCGCCG GCTTCGCGCCGCCGTACGACTCCACGGCGACGGCCCGCCTGCGGCGGGCG GGGTGCCCCCTGCTAGGCAAGACCAACATGGACGAGTTCGGCATGGGGTC CGGGACGCTCTTCAGCGACCACGGCCGCACGCTCAATCCCTGGTCCCCGG GTATGTTTCGTTTCGTTTCGTTTCGTTTCGTTTCGTTTCGTTTCGTTCCG TTTTGTTTTTTATCACACTAATGGTACGCAGCATGGTCATATATATACAT AAAGTATGTGTTGTGCATTTTTTTTACGTGCCATGTGTTTGTTTGCCGGC TTGCGCTCAGAGAGAGAGAGAGAGAGAGTCAGAGAGAGAGAGAGGCTTCT GAAATCGTGTGCTTCCTGCTGTGTTGTGTCGTGTCCGGTCTGGTCCGGTC CGGTTCGCACCCCGTCCCATCCTGTCGACAGCCAGCCGCACGCGCTGCTC TCGTTGCGCGCGTGTTTTTACGTGAGCAGATGCGGGGGGGGGGGGGGGGG GGGGGGGAGTATTCTAGCTTTTCAAACGCCTCTGCCCGCCCCCCCCCCCC GGGCCCACGCTCCAAGTGCGGGCGAAAAAACAAACNNNNNNNNNNCCGCC CCCCCCGGGCCGCCGCCCGCCCGCCGGGGGGGCCCTGGTGGCCCGTGTGT TTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGAGATGTCCTCGATCA TTCCAAGAGGCTGCTGCCGGCCCCCGCCACCGCGCAGCCCCGGAACGGTT GCGCGCAACCACAATTAGAGCGCCCACCAAAGTGACAACGCTTTAAGAAA AAAAGGGGGAAGAGACCTGTTTTTTTAGCTACAAAAAGAGAGGGCGGCAC AACCACTGAGAGCGGAGCGCCCCCCCCCCCCCTCAGCGAAGCGCCCTCCG TTCATCTCTTCCTCTCTCCCTCCACGCATGGGGGCGCCCTTCAACTGTCG CTCGCGCTCAAAATATTGCCACTGGTTCCGCAGCAGTTTCAAGACCGAGC GGCGGCGGCGGCGGCGGGGAGTGCAGCGAGGCGTTCTTCGTCCCCGGGGG GAGCTCCGGGGGCAGCGCCGCCGCGGTAGCGTCCGGGGCTTGCTTTGCGG CGCTGGGGTCGGACACCGGGGGCTCCGTGCGGCAGCCGGCGGCGTTCTGC GGGGTGGTCGGGCTGAAACCCACGTACGGGCTGGTTTCGCGCCACGGGCT CATCGCCTACGCGAGCTCCCTGGTGCGTGTGCTTGTGCTTGTGTGTGTGA GTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT TTGTGTGTGTGTGCATGTGTGAGGCGTGGTGCGACGCGCGCGTTCCCGTG CGTTCCGTCTTGCTTGTTGAGATGGTGGCCGGGGAGGCGGGACGCTGTGT GGTTGAAGAAGGGCCGGCCTGGTTTCTCGGCCCTATCCTGCGCGCGAGCC AGCGTGTCCACCTCTCGGGTGCAAGGCAATATTGATATTTTCATGGGTTG TTGTTCATCCATGGTTTACGAGATAAGTACACAAAAAAAACAAACACATA AGCGCACGCGCAAAAAAAACAAAGTGTGCGTGCCCGATCGTAAGTTCAAG TAGTGTGACTGACACCGACGATATCCGTCCGTATATGATGTATGTATGTG TTTGAACATGGTGTGGGTGAAAATTATTTTATTTTATTTTATTTTAGTTT ACTTTTTATTTTTCTGGTTTGAGGGGAAGGAATATATATACACGGGAGCC TACATTTAAATATCCGTGCACAGCGAACACCACCTGGTATACTGCTGTTT TGTCAGACCATCGACACACGCTCGCACACAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGCCTGACGCCTCGCCCCTCCGTTCTCCCTCCACTTTTTGT TTTTTTTCGGCAGGATACGCCGGGAGTTCTCGCGCGTAGTGTTTTGGATA GCGCCATGGTGCTGGACGCCATTGCGGGGCCGGATCAGAAAGACTCTACC TGTATACCTGCCGGGAGCAGAAGAAGCGGCGGCGGCGGTTTCGCGTCCGG TCTTATCGGGGCGGCGGCAGCGGCGGCGGCAGACTCGTCGTGGCCGCTGG AGGGTGTAACTGTCGGAATACCGACGGATTTTAACGTGGAAGAGCTT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig16848:846..3092-

>mRNA_L-elsbetiae_contig16848.4597.1 ID=mRNA_L-elsbetiae_contig16848.4597.1|Name=mRNA_L-elsbetiae_contig16848.4597.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1422bp|location=Sequence derived from alignment at L-elsbetiae_contig16848:846..3092- (Laminarionema elsbetiae ELsaHSoW15)
GGACGCCTCGCCGGCCCCCTGGACGGCATCCCGTACGCCGCCAAGGACAA
CTTCTGCACTCTCGGGGTCCAGACGACGGCGTCCTCCGCCGCCCTCGCCG
GCTTCGCGCCGCCGTACGACTCCACGGCGACGGCCCGCCTGCGGCGGGCG
GGGTGCCCCCTGCTAGGCAAGACCAACATGGACGAGTTCGGCATGGGGTC
CGGGACGCTCTTCAGCGACCACGGCCGCACGCTCAATCCCTGGTCCCCGG
GTATGGACGCCTCGCCGGCCCCCTGGACGGCATCCCGTACGCCGCCAAGG
ACAACTTCTGCACTCTCGGGGTCCAGACGACGGCGTCCTCCGCCGCCCTC
GCCGGCTTCGCGCCGCCGTACGACTCCACGGCGACGGCCCGCCTGCGGCG
GGCGGGGTGCCCCCTGCTAGGCAAGACCAACATGGACGAGTTCGGCATGG
GGTCCGGGACGCTCTTCAGCGACCACGGCCGCACGCTCAATCCCTGGTCC
CCGGGTATCGGCGGCGGCGGCGGCGGGGAGTGCAGCGAGGCGTTCTTCGT
CCCCGGGGGGAGCTCCGGGGGCAGCGCCGCCGCGGTAGCGTCCGGGGCTT
GCTTTGCGGCGCTGGGGTCGGACACCGGGGGCTCCGTGCGGCAGCCGGCG
GCGTTCTGCGGGGTGGTCGGGCTGAAACCCACGTACGGGCTGGTTTCGCG
CCACGGGCTCATCGCCTACGCGAGCTCCCTGCGGCGGCGGCGGCGGCGGG
GAGTGCAGCGAGGCGTTCTTCGTCCCCGGGGGGAGCTCCGGGGGCAGCGC
CGCCGCGGTAGCGTCCGGGGCTTGCTTTGCGGCGCTGGGGTCGGACACCG
GGGGCTCCGTGCGGCAGCCGGCGGCGTTCTGCGGGGTGGTCGGGCTGAAA
CCCACGTACGGGCTGGTTTCGCGCCACGGGCTCATCGCCTACGCGAGCTC
CCTGGATACGCCGGGAGTTCTCGCGCGTAGTGTTTTGGATAGCGCCATGG
TGCTGGACGCCATTGCGGGGCCGGATCAGAAAGACTCTACCTGTATACCT
GCCGGGAGCAGAAGAAGCGGCGGCGGCGGTTTCGCGTCCGGTCTTATCGG
GGCGGCGGCAGCGGCGGCGGCAGACTCGTCGTGGCCGCTGGAGGGTGTAA
CTGTCGGAATACCGACGGATTTTAACGTGGAAGAGCTTGATACGCCGGGA
GTTCTCGCGCGTAGTGTTTTGGATAGCGCCATGGTGCTGGACGCCATTGC
GGGGCCGGATCAGAAAGACTCTACCTGTATACCTGCCGGGAGCAGAAGAA
GCGGCGGCGGCGGTTTCGCGTCCGGTCTTATCGGGGCGGCGGCAGCGGCG
GCGGCAGACTCGTCGTGGCCGCTGGAGGGTGTAACTGTCGGAATACCGAC
GGATTTTAACGTGGAAGAGCTT
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