mRNA_L-elsbetiae_contig16848.4597.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: D8LG69_ECTSI (Glutaminyl-tRNA synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG69_ECTSI) HSP 1 Score: 311 bits (796), Expect = 1.750e-101 Identity = 165/237 (69.62%), Postives = 178/237 (75.11%), Query Frame = 1 Query: 1 GRLAGPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711 G L GPLDGIPYAAKDNFCTLGVQTTASSAALAGF PPYDST T RLR+ G L+GKTNMDEFGMGSGTLFS++GRTLNPWSP G V+SG FAALGSDTGGSVRQPAAFCGVVGLKPTYGL+ RHGLIAYASSLDTPGVLARS+LD+AMVLD +AGPD +DSTCIPAG R+G + SSWPLEGVTVGIP +FNVEEL Sbjct: 87 GTLTGPLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQVGSILMGKTNMDEFGMGSGTLFSEYGRTLNPWSPESPGDEKNTEAPFLVPGGSSGGSAAA-VSSGCSFAALGSDTGGSVRQPAAFCGVVGLKPTYGLIPRHGLIAYASSLDTPGVLARSILDAAMVLDVVAGPDSRDSTCIPAGKGRAGGGGFASDLLGAAAAG-SSSSWPLEGVTVGIPKEFNVEEL 321
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: A0A6H5KIR5_9PHAE (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIR5_9PHAE) HSP 1 Score: 308 bits (789), Expect = 7.790e-99 Identity = 166/237 (70.04%), Postives = 177/237 (74.68%), Query Frame = 1 Query: 1 GRLAGPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711 G L GPLDGIPYAAKDNFCTLGVQTTASSAALAGF PPYDST T RLR+AG L+GKTNMDEFGMGSGTLFS++GRTLNPWS G V+SG FAALGSDTGGSVRQPAAFCGVVGLKPTYGL+ RHGLIAYASSLDTPGVLARSVLD+AMVLD +AGPD KDSTCIPAG +G + SSWPLEGVTVGIP +FNVEEL Sbjct: 66 GTLTGPLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQAGSILMGKTNMDEFGMGSGTLFSEYGRTLNPWSRESPGDEENTEAPFFVPGGSSGGSAAA-VSSGCSFAALGSDTGGSVRQPAAFCGVVGLKPTYGLIPRHGLIAYASSLDTPGVLARSVLDAAMVLDVVAGPDPKDSTCIPAGKGHAGGGGFASDLLKAAAAG-SSSSWPLEGVTVGIPKEFNVEEL 300
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: W7TVN2_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVN2_9STRA) HSP 1 Score: 225 bits (574), Expect = 1.200e-66 Identity = 126/235 (53.62%), Postives = 148/235 (62.98%), Query Frame = 1 Query: 7 LAGPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711 + GPL GIP A KDNFCT GV+TTASS LA F PPY +TA +RL +G ++GKTNMDEFGMGS TLFS G+T+NPWS VA+G+ AALGSDTGGSVRQPAAFCG+VGLKPTYG VSRHGLIAYASSLD PGVL R+V D+A+VLD +AG D DSTC+ R A + L G+ VGIP +F ++EL Sbjct: 134 MKGPLHGIPIAVKDNFCTAGVRTTASSRMLANFVPPYSATAVSRLEASGAIVVGKTNMDEFGMGSATLFSHFGKTINPWSQAA-----EKGDKPRLAAGGSSGGSAVAVATGSALAALGSDTGGSVRQPAAFCGLVGLKPTYGRVSRHGLIAYASSLDCPGVLTRTVADAALVLDVVAGRDPLDSTCLEQPHR----PCFDRTMEAAASSRAAGLAVSLRGLKVGIPAEFAIQEL 359
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: A0A6A3H2L6_9STRA (Amidase domain-containing protein (Fragment) n=4 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3H2L6_9STRA) HSP 1 Score: 214 bits (544), Expect = 1.290e-64 Identity = 131/237 (55.27%), Postives = 151/237 (63.71%), Query Frame = 1 Query: 1 GRLAGPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711 G+ G LDGIP KD FCT + TTA S L GF PY+STAT RL G LGK NMDEF MGSGTL+S G T+NPWS +G XXXXXXXXX G CFAALGSDTGGSVRQPAA+CG+VGLKP+YG VSRHG+I+YASSLDTPG+ ARSV D+A+VL AIAGPD DSTC+ + S+ L GV VG+P ++ VEEL Sbjct: 115 GKARGLLDGIPVGIKDIFCTTNLATTAGSKVLEGFVSPYESTATQRLLDQGTVPLGKLNMDEFAMGSGTLYSKFGATINPWSKDLG--------DNAVVAGXXXXXXXXXXXXGCCFAALGSDTGGSVRQPAAYCGIVGLKPSYGRVSRHGMISYASSLDTPGIFARSVGDAAVVLKAIAGPDHMDSTCMTESLPEN-------WCSNTVEASQQSSTVDLTGVRVGVPAEYFVEEL 336
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: G5AEQ2_PHYSP (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=5 Tax=Phytophthora TaxID=4783 RepID=G5AEQ2_PHYSP) HSP 1 Score: 218 bits (554), Expect = 2.800e-64 Identity = 133/237 (56.12%), Postives = 153/237 (64.56%), Query Frame = 1 Query: 1 GRLAGPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711 G+ G LDGIP A KD FCT + TTA S L GF PPY+STAT RL G LGK NMDEF MGS TL+S G T+NPWS +G XXXXXXXXX ASG CFAALGSDTGGSVRQPAA+CG+VGLKP+YG VSRHG+I+YASSLDTPG+ ARSV D+A+VL AIAGPD DSTC+ + + L GV VG+P ++ VEEL Sbjct: 85 GKARGLLDGIPVAFKDIFCTKNLTTTAGSKVLEGFVPPYESTATQRLLDQGAVPLGKLNMDEFAMGSATLYSKFGATINPWSKDLG--------DGAVVAGXXXXXXXXXXASGCCFAALGSDTGGSVRQPAAYCGIVGLKPSYGRVSRHGMISYASSLDTPGIFARSVGDAAVVLKAIAGPDHMDSTCMTDALPEA-------WCSNTVEASQQSKNVDLTGVRVGVPAEYFVEEL 306
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: A0A6A5AUD5_9STRA (Amidase domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AUD5_9STRA) HSP 1 Score: 211 bits (538), Expect = 3.350e-64 Identity = 116/192 (60.42%), Postives = 130/192 (67.71%), Query Frame = 1 Query: 1 GRLAGPLDGIPYAAKDNFCTL-GVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIP 573 GR GPLDGIP KD FC GV TTASS L GF PY+STAT RL AG LGK NMDEF MGSGT +S G T+NPWS +G VASG CFAALGSDTGGSVRQPAA+CGV GLKP YG +SRHG+IA+ASSLDTPG+LA++V D+A+VL AIAGPD DST +P Sbjct: 82 GRARGPLDGIPVGVKDIFCMQNGVPTTASSKILQGFVAPYESTATQRLLDAGAIPLGKLNMDEFAMGSGTTYSTFGPTINPWSSDLG--------DRALVAGGSSGASAAAVASGCCFAALGSDTGGSVRQPAAYCGVTGLKPNYGRISRHGMIAFASSLDTPGILAKTVRDAAIVLHAIAGPDGHDSTALP 265
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: A0A425CN69_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CN69_9STRA) HSP 1 Score: 215 bits (547), Expect = 4.780e-63 Identity = 132/233 (56.65%), Postives = 150/233 (64.38%), Query Frame = 1 Query: 13 GPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711 G LDGIP KD FC + TTASS L GF PY+STAT RL G LLGK NMDEF MGSGTL+S G T+NPWS G+G XXXXXXXXX ASG CFAALGSDTGGSVRQPAA+CG+VGLKP+YG VSR+G+I+YASSLDTPG+ ARSV D+A+VL AIAGPD DSTCI L GV VG+P ++ V+EL Sbjct: 111 GLLDGIPMGVKDLFCMRNMPTTASSKILEGFVSPYESTATQRLLNQGAVLLGKLNMDEFAMGSGTLYSKFGATINPWSKGLG--------DKAVVAGXXXXXXXXXXASGCCFAALGSDTGGSVRQPAAYCGIVGLKPSYGRVSRYGMISYASSLDTPGIFARSVGDAAIVLKAIAGPDPMDSTCIT-------DTLPDNWCSNTVQSSKQSKKVDLTGVRVGVPAEYFVKEL 328
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: W2KJ73_PHYPR (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KJ73_PHYPR) HSP 1 Score: 210 bits (535), Expect = 8.570e-63 Identity = 132/237 (55.70%), Postives = 148/237 (62.45%), Query Frame = 1 Query: 1 GRLAGPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711 G G LDGIP KD FC V TTASS L F PY+STAT RL G LGK NMDEF MGSGT++S G T+NPWS +G XXXXXXXXX ASG CFAALGSDTGGSVRQPAA+CGVVGLKP+YG VSRHG+I+YASSLDTPGV ARSV D+A+VL AIAGPD DSTC+ L GV VG+P ++ V+EL Sbjct: 91 GHSLGLLDGIPVGVKDLFCMENVPTTASSKILENFLSPYESTATQRLLDQGAVPLGKLNMDEFAMGSGTIYSKFGATINPWSKDLG--------DNAVVAGXXXXXXXXXXASGCCFAALGSDTGGSVRQPAAYCGVVGLKPSYGRVSRHGMISYASSLDTPGVFARSVGDAAVVLQAIAGPDHMDSTCMT-------DELPENWCSNTVETSQQSKQVDLTGVRVGVPAEYFVKEL 312
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: A0A3R7JHL1_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JHL1_9STRA) HSP 1 Score: 213 bits (541), Expect = 1.430e-62 Identity = 131/237 (55.27%), Postives = 152/237 (64.14%), Query Frame = 1 Query: 1 GRLAGPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711 G+ G LDGIP KD FC V+TTA+S L GF PY+STAT RL + G LGK NMDEF MGSGTL+S G T+NPWS I XXXXXXXXX ASG CFAALGSDTGGSVRQPAA+CG+VGLKP+YG VSRHG+I+YASSLDTPG+ ARSV D+A+VL AIAGPD DSTC+ + L GV VG+P ++ V+EL Sbjct: 90 GQSLGLLDGIPVGVKDLFCMENVETTAASKILEGFVSPYESTATERLLQNGAVPLGKLNMDEFAMGSGTLYSKFGATINPWSKDIA--------QGAVVAGXXXXXXXXXXASGCCFAALGSDTGGSVRQPAAYCGIVGLKPSYGRVSRHGMISYASSLDTPGIFARSVGDAAVVLKAIAGPDHMDSTCMTDALPEN-------WCANTVEASRNSKEVDLTGVRVGVPAEYYVDEL 311
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Match: W4H4Y8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4Y8_9STRA) HSP 1 Score: 212 bits (539), Expect = 4.060e-62 Identity = 122/238 (51.26%), Postives = 144/238 (60.50%), Query Frame = 1 Query: 1 GRLAGPLDGIPYAAKDNFCTL-GVQTTASSAALAGFAPPYDSTATARLRRAGCPLLGKTNMDEFGMGSGTLFSDHGRTLNPWSPGIGGXXXXXXXXXXXXXXXXXXXXXXXVASGACFAALGSDTGGSVRQPAAFCGVVGLKPTYGLVSRHGLIAYASSLDTPGVLARSVLDSAMVLDAIAGPDQKDSTCIPAGSRRSGXXXXXXXXXXXXXXXXADSSWPLEGVTVGIPTDFNVEEL 711 GR GPLDGIP KD FC GV TTASS L GF PY+STAT RL AG LGK NMDEF MGSGT +S G T+NPWS +G VASG CFAALGSDTGGSVRQPAA+CGV GLKP YG +SRHG+IA+ASSLDTPG+LA+++ D+A+VL AIAGPD DST +P + + +TVG+P ++ V+EL Sbjct: 82 GRACGPLDGIPVGVKDIFCMQNGVPTTASSKILQGFVAPYESTATQRLLDAGAIPLGKLNMDEFAMGSGTTYSTFGPTINPWSSDLG--------DRALVAGGSSGASAAAVASGCCFAALGSDTGGSVRQPAAYCGVTGLKPNYGRISRHGMIAFASSLDTPGILAKTIRDAAIVLHAIAGPDGHDSTALP------------DKLPSQWEPASETDATNTKQLTVGVPKEYYVKEL 299 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16848.4597.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16848.4597.1 >prot_L-elsbetiae_contig16848.4597.1 ID=prot_L-elsbetiae_contig16848.4597.1|Name=mRNA_L-elsbetiae_contig16848.4597.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=237bp GRLAGPLDGIPYAAKDNFCTLGVQTTASSAALAGFAPPYDSTATARLRRAback to top mRNA from alignment at L-elsbetiae_contig16848:846..3092- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16848.4597.1 ID=mRNA_L-elsbetiae_contig16848.4597.1|Name=mRNA_L-elsbetiae_contig16848.4597.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2247bp|location=Sequence derived from alignment at L-elsbetiae_contig16848:846..3092- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16848:846..3092- >mRNA_L-elsbetiae_contig16848.4597.1 ID=mRNA_L-elsbetiae_contig16848.4597.1|Name=mRNA_L-elsbetiae_contig16848.4597.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1422bp|location=Sequence derived from alignment at L-elsbetiae_contig16848:846..3092- (Laminarionema elsbetiae ELsaHSoW15)back to top |