mRNA_L-elsbetiae_contig16740.4551.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16740.4551.1 vs. uniprot
Match: D8LIJ3_ECTSI (DUF4149 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIJ3_ECTSI) HSP 1 Score: 226 bits (577), Expect = 1.940e-71 Identity = 125/167 (74.85%), Postives = 135/167 (80.84%), Query Frame = 1 Query: 1 RLALLWVRSVWFGTSVWVSFVAGIVLMRAINMDNFGLAQAKLFDAYFKFSLLCLAVAGFTAAALVSXXXXXXXXXXXXAKLSATPFLVALAVVVLNLVFFSPQTTITMMERRRVCRELGVDRTSANPQVRTLSKRFGMLHGITNLLNLVALACGCVHLCALAGRLSL 501 R+A L SVWFGTSVWVSF+AGIVLMRA+ M+ FGLAQAKLFDAYFKFSLLCLAVAGFT AAL S + + ATPFLVA+A VV NLVFFSPQTTITMMER RVC+ELGVDR S +PQVR LSKRFGM HGI NL+NLVALACG VHLCALA RLSL Sbjct: 42 RVAHLCSFSVWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAVAGFTGAAL-SSSSSARSDGDDGSTVGATPFLVAVACVVANLVFFSPQTTITMMERSRVCKELGVDRKSPDPQVRKLSKRFGMFHGIANLINLVALACGAVHLCALAERLSL 207
BLAST of mRNA_L-elsbetiae_contig16740.4551.1 vs. uniprot
Match: A0A7S4MCN5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MCN5_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.820e-24 Identity = 70/161 (43.48%), Postives = 91/161 (56.52%), Query Frame = 1 Query: 25 SVWFGTSVWVSFVAGIVLMRAINMDNFGLAQAKLFDAYFKFSLLCLAVAGFTAAALVSXXXXXXXXXXXXAKLSATPFLVALAVVVLNLVFFSPQTTITMMERRRVCRELGV----------DRTSAN-PQVRTLSKRFGMLHGITNLLNLVALACGCVHL 474 S WFG SVWVSFV+G+V+ R + FG Q++LF AYF++S + +AVA TA AL LV +A V+LNL+F P+TT M +R V + LG D AN P++R LSK+FGMLHGI++L NL AL GCV L Sbjct: 56 SSWFGCSVWVSFVSGLVMFRNLPRHVFGRLQSRLFPAYFQYSAVTVAVAILTAGAL---------------GWRTNVLLVVMATVLLNLLFLEPETTRIMYKRHAVEKRLGTGHEVGQLKPDDPVKANDPELRALSKKFGMLHGISSLTNLAALGFGCVWL 201
BLAST of mRNA_L-elsbetiae_contig16740.4551.1 vs. uniprot
Match: A0A1E7FD76_9STRA (DUF4149 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FD76_9STRA) HSP 1 Score: 105 bits (262), Expect = 5.900e-24 Identity = 78/170 (45.88%), Postives = 98/170 (57.65%), Query Frame = 1 Query: 25 SVWFGTSVWVSFVAGIVLMRAINMDNFGLAQAKLFDAYFKFSLLCLAVAGFTAAALVSXXXXXXXXXXXXAKLSATPFLVALAVVVLNLVFFSPQTTITMMERRRVCRELGV----------DRTSAN-PQVRTLSKRFGMLHGITNLLNLVALACGCVHLCALAGRLSL 501 S WFG SVWVSF AGIV+ + + FG Q+KLF AYF FS + +A T+ L+S XXXXXXXX +V LA +++NL +F P TT M +R V + LG D AN PQ++ LSK FGMLHG++ LLNL AL GCV L A R+ L Sbjct: 56 SSWFGCSVWVSFPAGIVMFKTLPRHTFGRLQSKLFPAYFLFSAGAIIIAIGTSGDLLSSTSNXXXXXXXXXXXIPYSLIVILACILINLFYFEPATTRVMYQRHAVEKRLGTGHEIGQLRPTDPKKANDPQLKALSKTFGMLHGVSTLLNLAALGFGCVWLSKCAERMVL 225
BLAST of mRNA_L-elsbetiae_contig16740.4551.1 vs. uniprot
Match: A0A7R9VXI6_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VXI6_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.200e-23 Identity = 68/161 (42.24%), Postives = 92/161 (57.14%), Query Frame = 1 Query: 25 SVWFGTSVWVSFVAGIVLMRAINMDNFGLAQAKLFDAYFKFSLLCLAVAGFTAAALVSXXXXXXXXXXXXAKLSATPFLVALAVVVLNLVFFSPQTTITMMERRRVCRELGV----------DRTSAN-PQVRTLSKRFGMLHGITNLLNLVALACGCVHL 474 S WFG SVWVSFVAG+V+ R + FG Q++LF YF+FS L +AVA F+A A+ +A + + V+LNL+F P+TT M +R V + LG D AN P++R LSK+FGMLHG+++L+NL AL GCV L Sbjct: 60 SSWFGCSVWVSFVAGLVMFRNLPRHVFGRLQSRLFPVYFRFSALNVAVAIFSAGAV---------------GWNAYGLVAVMGTVLLNLLFLEPETTRIMFKRHTVEKRLGTGHEVGQLKPDDLEKANDPELRALSKKFGMLHGMSSLMNLAALGFGCVWL 205
BLAST of mRNA_L-elsbetiae_contig16740.4551.1 vs. uniprot
Match: A0A7S4ATM5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ATM5_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 7.660e-22 Identity = 67/158 (42.41%), Postives = 85/158 (53.80%), Query Frame = 1 Query: 25 SVWFGTSVWVSFVAGIVLMRAINMDNFGLAQAKLFDAYFKFSLLCLAVAGFTAAALVSXXXXXXXXXXXXAKLSATPFLVALAVVVLNLVFFSPQTTITMMERRRVCRELGV----------DRTSAN-PQVRTLSKRFGMLHGITNLLNLVALACGC 465 S WFG SVWVSF+AGIV+ + + FG Q+KLF AYF FS + VA T++AL L A LA +LNL++F P TT M +R V + LG D AN PQ++ LSK FGMLHG++ LLNL +L GC Sbjct: 55 SSWFGCSVWVSFIAGIVMFKTLPRHVFGRLQSKLFPAYFVFSAGAIVVAIATSSALTKSREEASSTNNIPYSLIAI-----LACTLLNLLYFEPATTKVMFQRHAVEKRLGTGHEIGKIRPDDPKKANDPQLKALSKTFGMLHGVSTLLNLGSLGFGC 207
BLAST of mRNA_L-elsbetiae_contig16740.4551.1 vs. uniprot
Match: A0A0G4GGW2_9ALVE (DUF4149 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GGW2_9ALVE) HSP 1 Score: 95.9 bits (237), Expect = 5.720e-20 Identity = 61/166 (36.75%), Postives = 85/166 (51.20%), Query Frame = 1 Query: 31 WFGTSVWVSFVAGIVLMRAINMDNFGLAQAKLFDAYFKFSLLCLAVAGFTAAALVSXXXXXXXXXXXXAKLSATPFLVALAVVVLNLVFFSPQTTITMMERRRVCRELGVDRT-----------SANPQVRTLSKRFGMLHGITNLLNLVALACGCVHLCALAGRL 495 WFG SVWVSFVAG+V+ ++ FG QAKLF YF+FS+LC++V AL + + +++LNL++F P TT M R V R LG + +P++ +LS RFG LHG + LNL+ L GC H+C + RL Sbjct: 106 WFGCSVWVSFVAGLVMFYSLPRHVFGQLQAKLFPRYFQFSVLCISVC----LALEVCAAKFRGSSKCMPREQQMNLIAVWGILLLNLLYFEPVTTKVMFLRHAVERRLGTGHEVGQLRPWDPVKAKDPELVSLSARFGKLHGCSTSLNLLGLGLGCWHICWIGARL 267
BLAST of mRNA_L-elsbetiae_contig16740.4551.1 vs. uniprot
Match: A0A7S1BIS9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIS9_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 6.300e-19 Identity = 66/167 (39.52%), Postives = 87/167 (52.10%), Query Frame = 1 Query: 31 WFGTSVWVSFVAGIVLMRAINMDNFGLAQAKLFDAYFKFSLLCLAVAGFTAAALVSXXXXXXXXXXXXAKLSATPFLVALAVVVLNLVFFSPQTTITMMERRRVCRELGV----------DRTSAN-PQVRTLSKRFGMLHGITNLLNLVALACGCVHLCALAGRLS 498 WFG SVWVS VAG+V RA+ FG A+LF YF FS + +++A A L A L+A L V NL++ P+TT M R V R LG D AN P++R L+K+FGMLHGI+ LLNL+A+ GCV LA +++ Sbjct: 68 WFGCSVWVSCVAGLVTFRALPRHVFGRLMARLFPVYFNFSAVTVSLAAAAARGL----------GWPIAWLAAI-----LGTVAANLLYLEPETTRVMFLRHVVERRLGTGHEVGQLKPSDPAKANDPELRALTKKFGMLHGISTLLNLMAMGFGCVWFSILAQKIT 219
BLAST of mRNA_L-elsbetiae_contig16740.4551.1 vs. uniprot
Match: A0A8J1W0M4_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1W0M4_9DINO) HSP 1 Score: 90.5 bits (223), Expect = 4.680e-18 Identity = 63/164 (38.41%), Postives = 85/164 (51.83%), Query Frame = 1 Query: 31 WFGTSVWVSFVAGIVLMRAINMDNFGLAQAKLFDAYFKFSLLCLAVAGFTAAALVSXXXXXXXXXXXXAKLSATP------FLVALAVVVLNLVFFSPQTTITMMERRRVCRELGV----------DRTSAN-PQVRTLSKRFGMLHGITNLLNLVALACGCVH 471 WFG S+WVSFVAG+V+ + FG QAKLF YF+FS++ ++ A L AK A P + +++LNL++F P+TT M ER +V +LG D AN P++ LSKRFG LHGI+ LNL+AL G H Sbjct: 87 WFGCSMWVSFVAGLVMFNNLPRHVFGRLQAKLFPRYFQFSVIFVS-----CALLPHLVPGSVLERTALAKTVALPQNQQFNLAAIIGILLLNLLYFEPRTTAVMFERHKVEVKLGTGHEIGQLKPSDPAKANDPELVALSKRFGKLHGISTSLNLIALCLGVWH 245
BLAST of mRNA_L-elsbetiae_contig16740.4551.1 vs. uniprot
Match: A0A8J4RRE6_9ROSI (DUF4149 domain-containing protein n=4 Tax=Fagaceae TaxID=3503 RepID=A0A8J4RRE6_9ROSI) HSP 1 Score: 82.4 bits (202), Expect = 2.210e-15 Identity = 59/177 (33.33%), Postives = 94/177 (53.11%), Query Frame = 1 Query: 1 RLALLWVRSVWFGTSVWVSFVAGIVLMRAINMDNFGLAQAKLFDAYFKFSLLCLAVAGFTAAALVSXXXXXXXXXXXXAKLSATPFLVALAVVVLNLVFFSPQTTITMMERRRVCR------ELG----VDRTSANPQVRTLSKRFGMLHGITNLLNLVALACGCVHLCALAGRLSL 501 +LA L S FGT++WV+F+AGI++ + + FG Q+K+F AYF +C AV+ + A L K L A A + NL+ FSP T M +R V R E+G V+ NP+++ ++K+FGM+HG+++L N+++ +H LAG+L+L Sbjct: 43 KLAHLLCYSTAFGTALWVTFIAGIIMFKNLPRHQFGSLQSKMFPAYFSMVGICCAVSVGSFAYL-----HPWKSSSTADKYQLGFLLSAFAFNLANLLVFSPMTIEMMKQRHEVERGSNIGDEVGWSKNVEVAKVNPKLKAMNKKFGMIHGLSSLANIMSFGSLAIHSWYLAGKLNL 214
BLAST of mRNA_L-elsbetiae_contig16740.4551.1 vs. uniprot
Match: A0A8J1YZS9_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1YZS9_9DINO) HSP 1 Score: 82.8 bits (203), Expect = 3.880e-15 Identity = 59/169 (34.91%), Postives = 83/169 (49.11%), Query Frame = 1 Query: 25 SVWFGTSVWVSFVAGIVLMRAINMDNFGLAQAKLFDAYFKFSLLCLAVAGFTAAALVSXXXXXXXXXXXXAKLSATPFLVA-LAVVVLNLVFFSPQTTITMMERRRVCRELGV----------DRTSAN-PQVRTLSKRFGMLHGITNLLNLVALACGCVHLCALAGRL 495 + WFG S+WVSFVAG+V+ + FG QA LF YF++S + +A A+ + L+ LA+V+LNL+ F P+TT M R +V LG D AN P++ LSK+FG LHG++ LNL+ L G H L R+ Sbjct: 97 ATWFGCSMWVSFVAGLVMFHNLPRHVFGRLQAALFPRYFQYSAIFVAACVLLDQAMPYVMPAARTSTSNQLGTTQLGNLIGILAIVLLNLLVFEPKTTAVMFARHKVEVRLGTGHEIGQLRPSDPEKANDPELVALSKKFGALHGVSTTLNLIGLCLGTWHCVWLGSRI 265 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16740.4551.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16740.4551.1 >prot_L-elsbetiae_contig16740.4551.1 ID=prot_L-elsbetiae_contig16740.4551.1|Name=mRNA_L-elsbetiae_contig16740.4551.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=142bp MRAINMDNFGLAQAKLFDAYFKFSLLCLAVAGFTAAALVSTSSGGGGGGDback to top mRNA from alignment at L-elsbetiae_contig16740:1075..3077- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16740.4551.1 ID=mRNA_L-elsbetiae_contig16740.4551.1|Name=mRNA_L-elsbetiae_contig16740.4551.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2003bp|location=Sequence derived from alignment at L-elsbetiae_contig16740:1075..3077- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16740:1075..3077- >mRNA_L-elsbetiae_contig16740.4551.1 ID=mRNA_L-elsbetiae_contig16740.4551.1|Name=mRNA_L-elsbetiae_contig16740.4551.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=852bp|location=Sequence derived from alignment at L-elsbetiae_contig16740:1075..3077- (Laminarionema elsbetiae ELsaHSoW15)back to top |