mRNA_L-elsbetiae_contig16706.4533.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: A0A6H5JMP7_9PHAE (Chitin-binding type-4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP7_9PHAE) HSP 1 Score: 305 bits (780), Expect = 1.410e-99 Identity = 136/236 (57.63%), Postives = 166/236 (70.34%), Query Frame = 1 Query: 1 GPAVVMERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQT-RPVFG-GESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702 G V R + DPDVLA YGGGDVW + AAWD GE PN NYLE+D IAV HGVCGD PQ G DNP YSTP + W + ++ G IIE+ + N HWGH+EYFLCDT DMDDPDGV Q C N YPL+R + D +NSP+DPDYPGR++++P CRGE E DQT RP+ GE L++G +N RY LP+I CEHC+L M+Y++ GC PGY EF P WP +CAP+KEDW+ Sbjct: 106 GADAVQARTIDNIDPDVLADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYQSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWL 340
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: A0A6H5JNS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS7_9PHAE) HSP 1 Score: 295 bits (754), Expect = 3.500e-97 Identity = 132/236 (55.93%), Postives = 165/236 (69.92%), Query Frame = 1 Query: 1 GPAVVMERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQT-RPVF-GGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702 G V R + DPDVLA YG G+ W + AAWD+GE PN NYLE+D IAV HGVCGD PQ G DNP YSTP + W + +E G IIEI + N HWGH+EYFLCDT DMDDPDGV Q C N +PL+R + D +NSP+D +YPGR++++P CRG N E DQ+ RPV GG L+ G +N+ RY LP+I CEHC+L M+Y++ GC PGY EF+P WP +CAP+KEDW+ Sbjct: 8 GADEVQARTITNIDPDVLADYGDGNYWIVGAAWDMGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYESGSIIEIRTVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMHPLDRDETDWWNSPIDQEYPGRFFVNPDCRGGNEETDQSGRPVLTGGGLGLDKGYINNGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFDP-EWPGDCAPDKEDWL 242
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: D8LED9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED9_ECTSI) HSP 1 Score: 302 bits (774), Expect = 1.590e-96 Identity = 134/236 (56.78%), Postives = 166/236 (70.34%), Query Frame = 1 Query: 1 GPAVVMERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQT-RPVF-GGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702 G V R + DPD+LA YGGGDVW + AAWD GE PN NYLE+D IAV HGVCGD PQ G DNP YST + W + + G IIE+ + N HWGH+EYFLCDT DMDDPD V Q C N YPL+R + D +NSP+DPDYPGR++++P CRG+N E DQ+ RPV GG+S L++G +N RY LP+I C+HC+L M+Y++ GC PGY EF P WP ECAP+KEDW+ Sbjct: 85 GADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEP-EWPGECAPDKEDWL 319
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI) HSP 1 Score: 305 bits (782), Expect = 8.820e-95 Identity = 136/236 (57.63%), Postives = 166/236 (70.34%), Query Frame = 1 Query: 1 GPAVVMERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQT-RPVFG-GESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702 G V R + DPD+LA YGGGDVW + AAWD GE PN NYLE+D IAV HGVCGD PQ G DNP YSTP + W + + G IIE+ + N HWGH+EYFLCDT DMDDPDGV Q C N YPL+R + D +NSP+DPDYPGR++++P CRGEN E DQT RP+ GE L++G +N RY LP+I CEHC+L M+Y++ GC PGY EF P WP +CAP+KEDW+ Sbjct: 64 GADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWL 298
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: A0A6H5JN72_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN72_9PHAE) HSP 1 Score: 291 bits (744), Expect = 3.010e-91 Identity = 134/260 (51.54%), Postives = 164/260 (63.08%), Query Frame = 1 Query: 1 GPAVVMERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQTRPVFGGESVLNDGTV--------------------------NHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702 G V R + DPD+LA YG GDVW + AAWD GE PN NYLE+D IAV HGVCGD PQ G DNP YSTP + W + ++ G IIE+ + N HWGH+EYFLCDT DMDDPDGV Q C N YPL+R + D +NSP+DPDYPGR++++P CRGE E DQ+ G S+LNDG V N RY LP+I CEHC+L M+Y++ GC PGY EF+P WP +CAPNKE+W+ Sbjct: 71 GADAVQARTIDNIDPDILADYGDGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYQSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQS-----GRSMLNDGEVGLDHVSIMYAYQVYGTSSWRSAKGYINTGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFDP-EWPGDCAPNKEEWL 324
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 276 bits (707), Expect = 5.560e-89 Identity = 124/235 (52.77%), Postives = 158/235 (67.23%), Query Frame = 1 Query: 1 GPAVVMERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQTRPVFGGESVLNDGTVNHMRYKLPD-ITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702 GP V ER + TDP VLA YG G+ WPL A++ GE+A NGNYLE D+IA HG+CGD Q+ + YSTP +W +L ++ GQ++EI + T YHWGHVE+F+C+ +M+DPDG+ Q CFN YPL RA+ D NSP+DP+YPGRYY+DP CR E DQT+P DG V H Y+LP+ +TC+ CIL M Y++G CK GY+EF P SWPS CAP K DWI Sbjct: 25 GPTYVKERGMVNTDPAVLAEYGDGE-WPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCR--EGETDQTKP-----EGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWI 251
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 268 bits (686), Expect = 1.550e-84 Identity = 126/234 (53.85%), Postives = 152/234 (64.96%), Query Frame = 1 Query: 1 GPAVVMERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQTRPVFGGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702 GP V +R D L YGGG+ +PL GE A NGNYLE ++IA HGVCGD Q+ + VYST WD L+ F GQ++E+DI+ YHWGH E+F+C+T DMDDPDGVP Q CFN +PL RADDD SP+DP+YPGRYY+DP CR E E +Q+ G ++ MRY LPDI CEHCIL M Y++G CK GY+EFNP SWPS CAPNK DWI Sbjct: 57 GPKYVKQRAYDNVDSATLDAYGGGEEFPLY----FGEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREE--ETEQSSNSIEGYNIK-------MRYVLPDIECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWI 277
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: D7FZR0_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR0_ECTSI) HSP 1 Score: 265 bits (676), Expect = 1.080e-83 Identity = 122/236 (51.69%), Postives = 156/236 (66.10%), Query Frame = 1 Query: 1 GPAVVMERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQTRPV--FGGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702 G A R + DPDVL +GGG +PLA +APNGNYLE +++AV HGVCGD Q+ YST +S W+ L + GQ++E I+ +HWGH+E+F+C+ + DPDG+P Q CFN+YPL RA+ D NSP+DP++PGRYY DP CRG+ EVDQT+P+ GE++ MRY LPDI C HCIL M YH+G C GY+EFNPPSWPS CAPNKEDW+ Sbjct: 55 GSAGTKARGIELMDPDVLESHGGGSEFPLAFV----PLAPNGNYLEPNEVAVRHGVCGDPEQTKPAGSNTYSTASSNWEPLATYRSGQVLEFVIVMNAHHWGHLEFFICNADN--DPDGIPTQECFNEYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGQTGEVDQTKPLHAISGENMK-------MRYVLPDIECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWV 277
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: D8LED5_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED5_ECTSI) HSP 1 Score: 263 bits (672), Expect = 7.120e-83 Identity = 117/202 (57.92%), Postives = 146/202 (72.28%), Query Frame = 1 Query: 103 LGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQT-RP-VFGGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702 +GE PN NYLE+D IAV HGVCGD PQ G DNP YSTP + W + +E G IIEI + N HWGH+EYFLCDT DMDD DGV Q C NKYPL+R + D +NSP+DP+YPGR++++P CRGEN E DQ+ RP + GG L+ G +N+ RY LP+I CEHC+L M+Y++ GC PGY EF P WP +CAP+KEDW+ Sbjct: 1 MGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYESGSIIEIRAVINNNHWGHIEYFLCDTADMDDADGVVTQDCLNKYPLDRDETDWWNSPIDPNYPGRFFVNPECRGENEETDQSGRPELTGGGLGLDKGYINNGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWL 201
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: D7FZQ9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ9_ECTSI) HSP 1 Score: 259 bits (661), Expect = 4.820e-81 Identity = 117/223 (52.47%), Postives = 152/223 (68.16%), Query Frame = 1 Query: 40 DPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQTRPV--FGGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702 DPDVLA++GGG +PL+ APNGNYLE +++AV HGVCGD Q+ YST +S W+ L F+ GQ +E +++ YHWGH+E+F+C+ + DP+G+P Q CFN+YPL RA+ D +NSP+DPD+PGRYY DP CRGE EVDQT+PV GE++ MRY LPDI C HCIL M YH+G C GYD+F+PPSWP +CA KE W+ Sbjct: 69 DPDVLAKHGGGIDFPLSFV----PRAPNGNYLEPNEVAVRHGVCGDPEQNKPSGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADN--DPNGIPTQECFNEYPLTRAEGDDYNSPIDPDFPGRYYCDPTCRGEEGEVDQTKPVHAISGENMK-------MRYVLPDIECSHCILQMVYHTGNTCYHIGYDDFDPPSWPGDCATTKEQWV 278 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16706.4533.1 >prot_L-elsbetiae_contig16706.4533.1 ID=prot_L-elsbetiae_contig16706.4533.1|Name=mRNA_L-elsbetiae_contig16706.4533.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp MERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGback to top mRNA from alignment at L-elsbetiae_contig16706:1557..3673+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16706.4533.1 ID=mRNA_L-elsbetiae_contig16706.4533.1|Name=mRNA_L-elsbetiae_contig16706.4533.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2117bp|location=Sequence derived from alignment at L-elsbetiae_contig16706:1557..3673+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16706:1557..3673+ >mRNA_L-elsbetiae_contig16706.4533.1 ID=mRNA_L-elsbetiae_contig16706.4533.1|Name=mRNA_L-elsbetiae_contig16706.4533.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1374bp|location=Sequence derived from alignment at L-elsbetiae_contig16706:1557..3673+ (Laminarionema elsbetiae ELsaHSoW15)back to top |