mRNA_L-elsbetiae_contig16706.4533.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig16706.4533.1
Unique NamemRNA_L-elsbetiae_contig16706.4533.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: A0A6H5JMP7_9PHAE (Chitin-binding type-4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP7_9PHAE)

HSP 1 Score: 305 bits (780), Expect = 1.410e-99
Identity = 136/236 (57.63%), Postives = 166/236 (70.34%), Query Frame = 1
Query:    1 GPAVVMERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQT-RPVFG-GESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702
            G   V  R +   DPDVLA YGGGDVW + AAWD GE  PN NYLE+D IAV HGVCGD PQ G DNP  YSTP + W  +  ++ G IIE+  +  N HWGH+EYFLCDT DMDDPDGV  Q C N YPL+R + D +NSP+DPDYPGR++++P CRGE  E DQT RP+   GE  L++G +N  RY LP+I CEHC+L M+Y++  GC  PGY EF P  WP +CAP+KEDW+
Sbjct:  106 GADAVQARTIDNIDPDVLADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYQSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWL 340          
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: A0A6H5JNS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS7_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 3.500e-97
Identity = 132/236 (55.93%), Postives = 165/236 (69.92%), Query Frame = 1
Query:    1 GPAVVMERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQT-RPVF-GGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702
            G   V  R +   DPDVLA YG G+ W + AAWD+GE  PN NYLE+D IAV HGVCGD PQ G DNP  YSTP + W  +  +E G IIEI  +  N HWGH+EYFLCDT DMDDPDGV  Q C N +PL+R + D +NSP+D +YPGR++++P CRG N E DQ+ RPV  GG   L+ G +N+ RY LP+I CEHC+L M+Y++  GC  PGY EF+P  WP +CAP+KEDW+
Sbjct:    8 GADEVQARTITNIDPDVLADYGDGNYWIVGAAWDMGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYESGSIIEIRTVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMHPLDRDETDWWNSPIDQEYPGRFFVNPDCRGGNEETDQSGRPVLTGGGLGLDKGYINNGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFDP-EWPGDCAPDKEDWL 242          
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: D8LED9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED9_ECTSI)

HSP 1 Score: 302 bits (774), Expect = 1.590e-96
Identity = 134/236 (56.78%), Postives = 166/236 (70.34%), Query Frame = 1
Query:    1 GPAVVMERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQT-RPVF-GGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702
            G   V  R +   DPD+LA YGGGDVW + AAWD GE  PN NYLE+D IAV HGVCGD PQ G DNP  YST  + W  +  +  G IIE+  +  N HWGH+EYFLCDT DMDDPD V  Q C N YPL+R + D +NSP+DPDYPGR++++P CRG+N E DQ+ RPV  GG+S L++G +N  RY LP+I C+HC+L M+Y++  GC  PGY EF P  WP ECAP+KEDW+
Sbjct:   85 GADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEP-EWPGECAPDKEDWL 319          
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI)

HSP 1 Score: 305 bits (782), Expect = 8.820e-95
Identity = 136/236 (57.63%), Postives = 166/236 (70.34%), Query Frame = 1
Query:    1 GPAVVMERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQT-RPVFG-GESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702
            G   V  R +   DPD+LA YGGGDVW + AAWD GE  PN NYLE+D IAV HGVCGD PQ G DNP  YSTP + W  +  +  G IIE+  +  N HWGH+EYFLCDT DMDDPDGV  Q C N YPL+R + D +NSP+DPDYPGR++++P CRGEN E DQT RP+   GE  L++G +N  RY LP+I CEHC+L M+Y++  GC  PGY EF P  WP +CAP+KEDW+
Sbjct:   64 GADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWL 298          
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: A0A6H5JN72_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN72_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 3.010e-91
Identity = 134/260 (51.54%), Postives = 164/260 (63.08%), Query Frame = 1
Query:    1 GPAVVMERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQTRPVFGGESVLNDGTV--------------------------NHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702
            G   V  R +   DPD+LA YG GDVW + AAWD GE  PN NYLE+D IAV HGVCGD PQ G DNP  YSTP + W  +  ++ G IIE+  +  N HWGH+EYFLCDT DMDDPDGV  Q C N YPL+R + D +NSP+DPDYPGR++++P CRGE  E DQ+     G S+LNDG V                          N  RY LP+I CEHC+L M+Y++  GC  PGY EF+P  WP +CAPNKE+W+
Sbjct:   71 GADAVQARTIDNIDPDILADYGDGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYQSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQS-----GRSMLNDGEVGLDHVSIMYAYQVYGTSSWRSAKGYINTGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFDP-EWPGDCAPNKEEWL 324          
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 5.560e-89
Identity = 124/235 (52.77%), Postives = 158/235 (67.23%), Query Frame = 1
Query:    1 GPAVVMERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQTRPVFGGESVLNDGTVNHMRYKLPD-ITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702
            GP  V ER +  TDP VLA YG G+ WPL  A++ GE+A NGNYLE D+IA  HG+CGD  Q+  +    YSTP  +W +L  ++ GQ++EI +  T YHWGHVE+F+C+  +M+DPDG+  Q CFN YPL RA+ D  NSP+DP+YPGRYY+DP CR    E DQT+P         DG V H  Y+LP+ +TC+ CIL M Y++G  CK  GY+EF P SWPS CAP K DWI
Sbjct:   25 GPTYVKERGMVNTDPAVLAEYGDGE-WPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCR--EGETDQTKP-----EGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWI 251          
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI)

HSP 1 Score: 268 bits (686), Expect = 1.550e-84
Identity = 126/234 (53.85%), Postives = 152/234 (64.96%), Query Frame = 1
Query:    1 GPAVVMERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQTRPVFGGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702
            GP  V +R     D   L  YGGG+ +PL      GE A NGNYLE ++IA  HGVCGD  Q+  +   VYST    WD L+ F  GQ++E+DI+   YHWGH E+F+C+T DMDDPDGVP Q CFN +PL RADDD   SP+DP+YPGRYY+DP CR E  E +Q+     G ++        MRY LPDI CEHCIL M Y++G  CK  GY+EFNP SWPS CAPNK DWI
Sbjct:   57 GPKYVKQRAYDNVDSATLDAYGGGEEFPLY----FGEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREE--ETEQSSNSIEGYNIK-------MRYVLPDIECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWI 277          
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: D7FZR0_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR0_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 1.080e-83
Identity = 122/236 (51.69%), Postives = 156/236 (66.10%), Query Frame = 1
Query:    1 GPAVVMERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQTRPV--FGGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702
            G A    R +   DPDVL  +GGG  +PLA       +APNGNYLE +++AV HGVCGD  Q+       YST +S W+ L  +  GQ++E  I+   +HWGH+E+F+C+  +  DPDG+P Q CFN+YPL RA+ D  NSP+DP++PGRYY DP CRG+  EVDQT+P+    GE++        MRY LPDI C HCIL M YH+G  C   GY+EFNPPSWPS CAPNKEDW+
Sbjct:   55 GSAGTKARGIELMDPDVLESHGGGSEFPLAFV----PLAPNGNYLEPNEVAVRHGVCGDPEQTKPAGSNTYSTASSNWEPLATYRSGQVLEFVIVMNAHHWGHLEFFICNADN--DPDGIPTQECFNEYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGQTGEVDQTKPLHAISGENMK-------MRYVLPDIECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWV 277          
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: D8LED5_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED5_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 7.120e-83
Identity = 117/202 (57.92%), Postives = 146/202 (72.28%), Query Frame = 1
Query:  103 LGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQT-RP-VFGGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702
            +GE  PN NYLE+D IAV HGVCGD PQ G DNP  YSTP + W  +  +E G IIEI  +  N HWGH+EYFLCDT DMDD DGV  Q C NKYPL+R + D +NSP+DP+YPGR++++P CRGEN E DQ+ RP + GG   L+ G +N+ RY LP+I CEHC+L M+Y++  GC  PGY EF P  WP +CAP+KEDW+
Sbjct:    1 MGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYESGSIIEIRAVINNNHWGHIEYFLCDTADMDDADGVVTQDCLNKYPLDRDETDWWNSPIDPNYPGRFFVNPECRGENEETDQSGRPELTGGGLGLDKGYINNGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWL 201          
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Match: D7FZQ9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ9_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 4.820e-81
Identity = 117/223 (52.47%), Postives = 152/223 (68.16%), Query Frame = 1
Query:   40 DPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHGVCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVEYFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDPPCRGENNEVDQTRPV--FGGESVLNDGTVNHMRYKLPDITCEHCILMMRYHSGKGCKSPGYDEFNPPSWPSECAPNKEDWI 702
            DPDVLA++GGG  +PL+        APNGNYLE +++AV HGVCGD  Q+       YST +S W+ L  F+ GQ +E +++   YHWGH+E+F+C+  +  DP+G+P Q CFN+YPL RA+ D +NSP+DPD+PGRYY DP CRGE  EVDQT+PV    GE++        MRY LPDI C HCIL M YH+G  C   GYD+F+PPSWP +CA  KE W+
Sbjct:   69 DPDVLAKHGGGIDFPLSFV----PRAPNGNYLEPNEVAVRHGVCGDPEQNKPSGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADN--DPNGIPTQECFNEYPLTRAEGDDYNSPIDPDFPGRYYCDPTCRGEEGEVDQTKPVHAISGENMK-------MRYVLPDIECSHCILQMVYHTGNTCYHIGYDDFDPPSWPGDCATTKEQWV 278          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16706.4533.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMP7_9PHAE1.410e-9957.63Chitin-binding type-4 domain-containing protein n=... [more]
A0A6H5JNS7_9PHAE3.500e-9755.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LED9_ECTSI1.590e-9656.78EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LED7_ECTSI8.820e-9557.63EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JN72_9PHAE3.010e-9151.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G4D7_ECTSI5.560e-8952.77EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LMS9_ECTSI1.550e-8453.85EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LM... [more]
D7FZR0_ECTSI1.080e-8351.69EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LED5_ECTSI7.120e-8357.92EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FZQ9_ECTSI4.820e-8152.47EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16706contigL-elsbetiae_contig16706:1557..3673 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score303.5
Seed ortholog evalue8.2e-80
Seed eggNOG ortholog2880.D8LED7
KEGG koko:K01315
KEGG Pathwayko04080,ko04610,ko05150,ko05164,map04080,map04610,map05150,map05164
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
EC3.4.21.7
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko04147,ko04516
Exons5
Model size702
Cds size687
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16706.4533.1prot_L-elsbetiae_contig16706.4533.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig16706 1572..3673 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815694.836466-UTR-L-elsbetiae_contig16706:1556..15711622815694.836466-UTR-L-elsbetiae_contig16706:1556..1571Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig16706 1557..1571 +
1691683042.9764256-UTR-L-elsbetiae_contig16706:1556..15711691683042.9764256-UTR-L-elsbetiae_contig16706:1556..1571Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig16706 1557..1571 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815694.8489008-CDS-L-elsbetiae_contig16706:1571..17421622815694.8489008-CDS-L-elsbetiae_contig16706:1571..1742Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16706 1572..1742 +
1691683042.9902875-CDS-L-elsbetiae_contig16706:1571..17421691683042.9902875-CDS-L-elsbetiae_contig16706:1571..1742Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16706 1572..1742 +
1622815694.8592427-CDS-L-elsbetiae_contig16706:2178..22951622815694.8592427-CDS-L-elsbetiae_contig16706:2178..2295Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16706 2179..2295 +
1691683042.999156-CDS-L-elsbetiae_contig16706:2178..22951691683042.999156-CDS-L-elsbetiae_contig16706:2178..2295Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16706 2179..2295 +
1622815694.869327-CDS-L-elsbetiae_contig16706:2641..28111622815694.869327-CDS-L-elsbetiae_contig16706:2641..2811Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16706 2642..2811 +
1691683043.0080512-CDS-L-elsbetiae_contig16706:2641..28111691683043.0080512-CDS-L-elsbetiae_contig16706:2641..2811Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16706 2642..2811 +
1622815694.8792064-CDS-L-elsbetiae_contig16706:2976..31131622815694.8792064-CDS-L-elsbetiae_contig16706:2976..3113Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16706 2977..3113 +
1691683043.0183399-CDS-L-elsbetiae_contig16706:2976..31131691683043.0183399-CDS-L-elsbetiae_contig16706:2976..3113Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16706 2977..3113 +
1622815694.8892024-CDS-L-elsbetiae_contig16706:3581..36731622815694.8892024-CDS-L-elsbetiae_contig16706:3581..3673Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16706 3582..3673 +
1691683043.0305047-CDS-L-elsbetiae_contig16706:3581..36731691683043.0305047-CDS-L-elsbetiae_contig16706:3581..3673Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16706 3582..3673 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig16706.4533.1

>prot_L-elsbetiae_contig16706.4533.1 ID=prot_L-elsbetiae_contig16706.4533.1|Name=mRNA_L-elsbetiae_contig16706.4533.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp
MERQLARTDPDVLARYGGGDVWPLAAAWDLGEIAPNGNYLENDDIAVSHG
VCGDTPQSGSDNPIVYSTPTSEWDVLEDFEPGQIIEIDIIFTNYHWGHVE
YFLCDTKDMDDPDGVPKQSCFNKYPLNRADDDSFNSPVDPDYPGRYYIDP
PCRGENNEVDQTRPVFGGESVLNDGTVNHMRYKLPDITCEHCILMMRYHS
GKGCKSPGYDEFNPPSWPSECAPNKEDWI
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mRNA from alignment at L-elsbetiae_contig16706:1557..3673+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig16706.4533.1 ID=mRNA_L-elsbetiae_contig16706.4533.1|Name=mRNA_L-elsbetiae_contig16706.4533.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2117bp|location=Sequence derived from alignment at L-elsbetiae_contig16706:1557..3673+ (Laminarionema elsbetiae ELsaHSoW15)
GGCCCAGCGGTCGTGATGGAACGCCAACTGGCCCGCACGGACCCTGATGT CCTGGCAAGGTACGGCGGGGGCGACGTTTGGCCTCTGGCGGCGGCGTGGG ACCTTGGAGAGATCGCGCCCAACGGTAACTACCTCGAGAACGACGACATC GCTGTCAGCCACGGCGTATGTGGCGACACCCCACAGGTTAGGATCGCCAT GTTCATGACATTGCCGGTACGGCGAGCGTTGCTGGCTCTACGTACGGCGG GTGCATGTATAGACTCTGTTTGCACTTCTCTATTGTTTTTGGGCGGTGGG AGACGTAGGCAAGGAACACGCATGTTTTTTGTGGATGACGTTTCTACACT GCTCGAGTGATGCTGCTGTCTTGGCACGGAGGTGTATCATCGGCGTGAAG CCCGGCCCGGACTGGTCGAGGCTCAATCCCTCGCGTGTATATAGTCTAGA CTATGCGTTAGGATGTTGGGTGGAAATGATGAAGCCGAGATTCCTCCGCC CGTGTTCTGAATCTCACAAAACCAAGGACGACGAAGAAAGCTCCGTTTGA TTGCTCATGTACATACATGCGTATATCCATGCTCTTCGTTTTTCCTCTGG CTTCTTGACGATGTTGTTTCAGAGCGGCAGCGACAATCCGATCGTCTACA GCACCCCGACCAGCGAGTGGGACGTCCTCGAAGACTTTGAGCCCGGACAA ATCATCGAAATTGACATAATCTTCACCAACTACCACTGGGTGAGAGAGCG TGCTGGCGACCCCCGATGACGGGGCATCTTTTCGGCTTGCCGCGCTCATC GTTTGACCCGAACAAAGGCAAGCCTGCTTCTCGCTAGACGCCAAACATGA TGGCGCTGTACGTGCTTGCGCATGCTTGTACGATGGTGCGCCTGTACTGG CAGGCAGTTTCCGTGTTGCCTCCCCGCAGCAGGACCTCATCCGTCGAGTA GAGCTACTCAGATTGAACGAGCTGTAAGTAGCGGTAAGCCATACCGTCTT GCACGCGCGGGCTTTCTCGTCTCAACCCGTATAATCTACCATCGTCCTTG TCGCCCCTCTGCCCTGCTCGTCCTTGCTCTACCAGGGGCACGTGGAGTAT TTTTTGTGTGACACGAAAGATATGGACGACCCTGACGGCGTGCCGAAGCA GAGCTGCTTTAACAAATACCCTCTCAACCGGGCCGACGACGACTCTTTCA ACAGCCCCGTGGATCCCGACTACCCCGGCCGTTACTACATCGACCCGCCC TGCAGGTATAGTTAGCAGCGACATTGCGAGACATGGCACGCACAAGAGAA CTGGTACATCATTCGCACGGAATACAACAATACATCTTGAATGGAGGTCG GCAGAGCTGCTATGTAAGGGTTGAGTCGTGAAACCATGCTCATTTCTTTT CCCTTGTGTTTTTTCTGCAGGGGCGAAAACAATGAGGTGGACCAGACCCG ACCCGTTTTCGGCGGCGAAAGCGTCTTGAATGACGGCACCGTGAATCACA TGCGGTACAAGCTTCCGGACATCACCTGCGAGCACTGCATCCTCATGATG CGATACCGTGAGTTTCATTGATTTCACTGGCTCGACTCAACAGCAGTGAC ATGCCGTGGGCAGCTAGTTCGTAGACATTGGTTGTGACGATAGCATCACC TGCTTGCCATATGTGAGAGTGGGTGTTATAGAAGCGAAAATTAAACCATT AGTGTAGACAGTCAGTACTGACTGGTCTAATGGTTTAACTTCCGCTTCTA TAGTGTGTACGTATTCTCCGTACTCTATCGATTACTCCTATTTGTTTTGT GGCATCTCTCCCTCGGTGGTCTCCTACCCCCGCCCTTCCCGCGGTCCCAT CTACGGAAATTAAATTACCCGTACGCCTCCTCCTCCGGACTTTCAGTGTA TTTTAGCGAACCAAAAGCATGCGCGTATCTTGATGACGGACGGACGTGTT ATATCTCTGTTTCGCCCCTCCCCTTCTCTTCCTCCGGTCGTTGAAATATG ATGACCTCGTGTTCATCAATCCCAGATTCGGGCAAGGGCTGCAAATCTCC CGGGTATGACGAGTTCAACCCCCCTTCATGGCCCAGCGAGTGTGCCCCCA ACAAGGAAGACTGGATC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig16706:1557..3673+

>mRNA_L-elsbetiae_contig16706.4533.1 ID=mRNA_L-elsbetiae_contig16706.4533.1|Name=mRNA_L-elsbetiae_contig16706.4533.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1374bp|location=Sequence derived from alignment at L-elsbetiae_contig16706:1557..3673+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGAACGCCAACTGGCCCGCACGGACCCTGATGTCCTGGCAAGGTACGG
CGGGGGCGACGTTTGGCCTCTGGCGGCGGCGTGGGACCTTGGAGAGATCG
CGCCCAACGGTAACTACCTCGAGAACGACGACATCGCTGTCAGCCACGGC
GTATGTGGCGACACCCCACAGATGGAACGCCAACTGGCCCGCACGGACCC
TGATGTCCTGGCAAGGTACGGCGGGGGCGACGTTTGGCCTCTGGCGGCGG
CGTGGGACCTTGGAGAGATCGCGCCCAACGGTAACTACCTCGAGAACGAC
GACATCGCTGTCAGCCACGGCGTATGTGGCGACACCCCACAGAGCGGCAG
CGACAATCCGATCGTCTACAGCACCCCGACCAGCGAGTGGGACGTCCTCG
AAGACTTTGAGCCCGGACAAATCATCGAAATTGACATAATCTTCACCAAC
TACCACTGGAGCGGCAGCGACAATCCGATCGTCTACAGCACCCCGACCAG
CGAGTGGGACGTCCTCGAAGACTTTGAGCCCGGACAAATCATCGAAATTG
ACATAATCTTCACCAACTACCACTGGGGGCACGTGGAGTATTTTTTGTGT
GACACGAAAGATATGGACGACCCTGACGGCGTGCCGAAGCAGAGCTGCTT
TAACAAATACCCTCTCAACCGGGCCGACGACGACTCTTTCAACAGCCCCG
TGGATCCCGACTACCCCGGCCGTTACTACATCGACCCGCCCTGCAGGGGC
ACGTGGAGTATTTTTTGTGTGACACGAAAGATATGGACGACCCTGACGGC
GTGCCGAAGCAGAGCTGCTTTAACAAATACCCTCTCAACCGGGCCGACGA
CGACTCTTTCAACAGCCCCGTGGATCCCGACTACCCCGGCCGTTACTACA
TCGACCCGCCCTGCAGGGGCGAAAACAATGAGGTGGACCAGACCCGACCC
GTTTTCGGCGGCGAAAGCGTCTTGAATGACGGCACCGTGAATCACATGCG
GTACAAGCTTCCGGACATCACCTGCGAGCACTGCATCCTCATGATGCGAT
ACCGGGCGAAAACAATGAGGTGGACCAGACCCGACCCGTTTTCGGCGGCG
AAAGCGTCTTGAATGACGGCACCGTGAATCACATGCGGTACAAGCTTCCG
GACATCACCTGCGAGCACTGCATCCTCATGATGCGATACCATTCGGGCAA
GGGCTGCAAATCTCCCGGGTATGACGAGTTCAACCCCCCTTCATGGCCCA
GCGAGTGTGCCCCCAACAAGGAAGACTGGATCATTCGGGCAAGGGCTGCA
AATCTCCCGGGTATGACGAGTTCAACCCCCCTTCATGGCCCAGCGAGTGT
GCCCCCAACAAGGAAGACTGGATC
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