mRNA_L-elsbetiae_contig1650.4410.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1650.4410.1 vs. uniprot
Match: D8LF53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF53_ECTSI) HSP 1 Score: 242 bits (618), Expect = 3.410e-74 Identity = 120/158 (75.95%), Postives = 133/158 (84.18%), Query Frame = 1 Query: 316 MNHCTAGAGAAALARPFMPGRGRGSARPRGGPPMLWALLSATGLVVATSTKSAVSQL-LASEEGTNGEEGGADAGNKVATAMVSFIKAYKKELSPLIPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDRPQWPPPGWFAGEKW 786 MNHCT G G AALARPF P RG+GSA+PRG PP LW L A G+V S +SAVS+L LAS++G ++GG A NKV AM+SFIKAYKKELSPLIPPACRFLPTCSVYGV+AIEKFGPTKGAVLTAWRLMRCNPFAGYG+D PQWPPPGWFAGE+W Sbjct: 1 MNHCTPG-GVAALARPFWPDRGQGSAQPRGSPPALWTLACAAGVVAVASARSAVSRLVLASDDGE--QDGGGAAVNKVGAAMISFIKAYKKELSPLIPPACRFLPTCSVYGVQAIEKFGPTKGAVLTAWRLMRCNPFAGYGVDYPQWPPPGWFAGERW 155
BLAST of mRNA_L-elsbetiae_contig1650.4410.1 vs. uniprot
Match: A0A835ZNH9_9STRA (Hemolytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNH9_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.410e-33 Identity = 55/78 (70.51%), Postives = 64/78 (82.05%), Query Frame = 1 Query: 544 VATAMVSFIKAYKKELSPLIPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDRPQWPPPGWFAG 777 + AM+ FIKAYK+E+SPL+PPACRF PTCSVY VE+IE+FG +G VLTAWRL+RC P GYG D PQWPPP WFAG Sbjct: 64 IKAAMIGFIKAYKREISPLLPPACRFFPTCSVYAVESIEEFGAWRGFVLTAWRLLRCTPVGGYGYDPPQWPPPNWFAG 141
BLAST of mRNA_L-elsbetiae_contig1650.4410.1 vs. uniprot
Match: A0A4D9DFE3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DFE3_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.590e-29 Identity = 48/74 (64.86%), Postives = 60/74 (81.08%), Query Frame = 1 Query: 556 MVSFIKAYKKELSPLIPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDRPQWPPPGWFAG 777 +++F + YK+ +SPL+P ACRF PTCS Y +E+++KFGP KGAVLTAWRL+RCNP G G D PQWPPPGW AG Sbjct: 68 LINFFRGYKRYISPLLPQACRFFPTCSEYAIESVQKFGPAKGAVLTAWRLLRCNPLGGRGWDPPQWPPPGWKAG 141
BLAST of mRNA_L-elsbetiae_contig1650.4410.1 vs. uniprot
Match: A0A7S1U9Q3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9Q3_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.050e-28 Identity = 47/80 (58.75%), Postives = 65/80 (81.25%), Query Frame = 1 Query: 538 NKVATAMVSFIKAYKKELSPLIPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDRPQWPPPGWFAG 777 ++++ A++ ++ YK+E+SP + PACRFLPTCS Y +++I+ +GP KG VLTAWR++RCNPF G G D PQWPPPGWFAG Sbjct: 69 SELSRALMGAVRWYKREISPSMAPACRFLPTCSGYSIDSIKTYGPWKGLVLTAWRILRCNPFGGSGYDPPQWPPPGWFAG 148
BLAST of mRNA_L-elsbetiae_contig1650.4410.1 vs. uniprot
Match: W7TML8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TML8_9STRA) HSP 1 Score: 123 bits (309), Expect = 2.330e-28 Identity = 48/74 (64.86%), Postives = 60/74 (81.08%), Query Frame = 1 Query: 556 MVSFIKAYKKELSPLIPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDRPQWPPPGWFAG 777 +++F + YK+ +SPL+P ACRF PTCS Y +E+++KFGP KGAVLTAWRL+RCNP G G D PQWPPPGW AG Sbjct: 166 LINFFRGYKRYISPLLPQACRFFPTCSEYAIESVQKFGPAKGAVLTAWRLLRCNPLGGRGWDPPQWPPPGWKAG 239
BLAST of mRNA_L-elsbetiae_contig1650.4410.1 vs. uniprot
Match: A0A7S2R8H5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R8H5_9STRA) HSP 1 Score: 118 bits (296), Expect = 9.220e-28 Identity = 50/74 (67.57%), Postives = 60/74 (81.08%), Query Frame = 1 Query: 538 NKVATAMVSFIKAYKKELSPLIPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDRPQWPP 759 N V+ MV+ I YK +SPL+PPACRFLPTCS YGV+AIE+FGP+KG VLTAWRL+RC+PF G G D P+WPP Sbjct: 61 NPVSIGMVATIGVYKNVISPLLPPACRFLPTCSQYGVQAIEEFGPSKGVVLTAWRLLRCSPFGGKGYDPPKWPP 134
BLAST of mRNA_L-elsbetiae_contig1650.4410.1 vs. uniprot
Match: A0A7S0QB70_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QB70_9EUKA) HSP 1 Score: 119 bits (297), Expect = 2.840e-27 Identity = 52/99 (52.53%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 487 LASEEGTNGEEGGADAGNKVATAMVSFIKAYKKELSPLIPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDRPQWPPPGWFAGEK 783 LA G N E V V +K YK+ LSPL+PP CRF+PTCS Y +++ E+F P + AVLT WRL+RCNP AGYG+D PQWPPPG++AG + Sbjct: 18 LARYTGFNSERERQQPAGAVTEWAVGALKWYKRALSPLLPPGCRFVPTCSEYAIQSFEQFSPVQAAVLTVWRLVRCNPTAGYGVDAPQWPPPGYWAGSQ 116
BLAST of mRNA_L-elsbetiae_contig1650.4410.1 vs. uniprot
Match: B8BR73_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BR73_THAPS) HSP 1 Score: 113 bits (283), Expect = 9.310e-27 Identity = 47/78 (60.26%), Postives = 63/78 (80.77%), Query Frame = 1 Query: 544 VATAMVSFIKAYKKELSPLIPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDRPQWPPPGWFAG 777 ++++M++ I YK+ +SPL+PPACRFLPTCS YGV+AIE+FGP+KG +LTAWRL RC+PF G G D P+WPP + G Sbjct: 1 MSSSMINAIGFYKQWISPLLPPACRFLPTCSQYGVQAIEEFGPSKGVLLTAWRLARCSPFGGRGYDPPKWPPVAYNYG 78
BLAST of mRNA_L-elsbetiae_contig1650.4410.1 vs. uniprot
Match: A0A7S2ENE8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ENE8_TRICV) HSP 1 Score: 118 bits (295), Expect = 2.220e-26 Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = 1 Query: 496 EEGTNGEEGGADAGNKVATAMVSFIKAYKKELSPLIPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDRPQWPP 759 + G G + ++ +MVS I YK+ +SPL+PPACRF+PTCS YGV+AI++FGPTKGA+LTAWRLMRC+PF G G D P+WPP Sbjct: 154 DRGVPERSAGGNGDGAMSASMVSAIGFYKQFISPLLPPACRFVPTCSQYGVQAIQEFGPTKGAMLTAWRLMRCSPFGGKGYDPPRWPP 241
BLAST of mRNA_L-elsbetiae_contig1650.4410.1 vs. uniprot
Match: A0A7S1XBZ4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XBZ4_9RHOD) HSP 1 Score: 111 bits (278), Expect = 1.340e-25 Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 1 Query: 544 VATAMVSFIKAYKKELSPLIPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDRPQWPPPGWFAG 777 ++ M++ ++ YK+++SPL+PP CRFLP+CS Y +EAI++FGP KG VLTAWR++RCNPF G G D PQWPP + +G Sbjct: 38 LSVVMLTALRWYKEQISPLMPPNCRFLPSCSSYSIEAIQEFGPAKGLVLTAWRILRCNPFGGAGYDPPQWPPVHFRSG 115 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1650.4410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1650.4410.1 >prot_L-elsbetiae_contig1650.4410.1 ID=prot_L-elsbetiae_contig1650.4410.1|Name=mRNA_L-elsbetiae_contig1650.4410.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=218bp MTVPSRLRVLLVLFSLLAVWLPDRLSNATGSGHVNHTPRIGPSRAPATASback to top mRNA from alignment at L-elsbetiae_contig1650:19699..21434+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1650.4410.1 ID=mRNA_L-elsbetiae_contig1650.4410.1|Name=mRNA_L-elsbetiae_contig1650.4410.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1736bp|location=Sequence derived from alignment at L-elsbetiae_contig1650:19699..21434+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1650:19699..21434+ >mRNA_L-elsbetiae_contig1650.4410.1 ID=mRNA_L-elsbetiae_contig1650.4410.1|Name=mRNA_L-elsbetiae_contig1650.4410.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1308bp|location=Sequence derived from alignment at L-elsbetiae_contig1650:19699..21434+ (Laminarionema elsbetiae ELsaHSoW15)back to top |