mRNA_L-elsbetiae_contig16416.4361.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig16416.4361.1
Unique NamemRNA_L-elsbetiae_contig16416.4361.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig16416.4361.1 vs. uniprot
Match: D7FNV4_ECTSI (Calcium channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNV4_ECTSI)

HSP 1 Score: 370 bits (949), Expect = 2.450e-124
Identity = 186/241 (77.18%), Postives = 209/241 (86.72%), Query Frame = 1
Query:   28 RHILGAVAEIWVLICLNIVLFAWVGVILFAGTSEGEEKFPDLFEASWRLFVLFTTTNFPEIMMDALDQVRASIIYFAGFVILNVFFFAPLSLAMIFNVFRGGQSGIPRMEEEIRLESSAAAFALLDNRQTGQVSVADMGAFLLEVHSMRGVACREMSRLQDLMEEAGETTPEGGPSLNLQDFKDAVSVMDRSLRHAEWITEVQWYFPRLYQSPGFRRLTRLVKHQRVTLWPGGLGLSRFSV 750
            RHILGAVAEIWVLI  NI LFAWVGVILF+GT EG ++F DL EASWRLFVLFTTTNFP IMM ALDQVRA+II+FA FVILNVFF APLSLA IFNVFRGGQSGIP+MEEEIRL S+AAAF LLD+RQ+GQV  A+MGAFLLE+HSMRGVA RE+SRLQ L++E G  TPE  PSL LQDF+DAV V+DRS  HAEWITE+QWY+P+LYQSPGFRRLTR+VKH+RVT WPG  G  +FS+
Sbjct:   13 RHILGAVAEIWVLILFNIGLFAWVGVILFSGTEEGGKQFSDLCEASWRLFVLFTTTNFPTIMMTALDQVRATIIFFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLLDDRQSGQVLSANMGAFLLELHSMRGVASRELSRLQGLIDEVGARTPEEAPSLTLQDFQDAVDVLDRSREHAEWITEIQWYYPQLYQSPGFRRLTRIVKHKRVTFWPGCCGTPQFSM 253          
BLAST of mRNA_L-elsbetiae_contig16416.4361.1 vs. uniprot
Match: A0A6H5KIA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA0_9PHAE)

HSP 1 Score: 373 bits (958), Expect = 1.010e-119
Identity = 187/241 (77.59%), Postives = 212/241 (87.97%), Query Frame = 1
Query:   28 RHILGAVAEIWVLICLNIVLFAWVGVILFAGTSEGEEKFPDLFEASWRLFVLFTTTNFPEIMMDALDQVRASIIYFAGFVILNVFFFAPLSLAMIFNVFRGGQSGIPRMEEEIRLESSAAAFALLDNRQTGQVSVADMGAFLLEVHSMRGVACREMSRLQDLMEEAGETTPEGGPSLNLQDFKDAVSVMDRSLRHAEWITEVQWYFPRLYQSPGFRRLTRLVKHQRVTLWPGGLGLSRFSV 750
            RHILGAVAEIWVLI  NI LFAWVGVILF+GT EG E+F DL EASWRLF+LFTTTNFP IMM ALDQVRA+I++FA FVILNVFF APLSLA IFNVFRGGQSGIP+MEEEIRL S+AAAF LLD+RQ+GQVS A+MGAFLLE+HSMRGVA RE+SRLQ+L++EAG  TPE  PSL LQDF+DAV VM+RS  HAEWITE+QWY+P+LYQS GFRRLTR+VKH+RVTLWPG  G  +FS+
Sbjct:  300 RHILGAVAEIWVLILFNIGLFAWVGVILFSGTEEGGEQFSDLCEASWRLFILFTTTNFPTIMMTALDQVRATIVFFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLLDDRQSGQVSSANMGAFLLELHSMRGVASRELSRLQELIDEAGARTPEEAPSLTLQDFQDAVGVMERSREHAEWITEIQWYYPQLYQSHGFRRLTRIVKHKRVTLWPGFCGTRQFSM 540          
BLAST of mRNA_L-elsbetiae_contig16416.4361.1 vs. uniprot
Match: W4GNX5_9STRA (EF-hand domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNX5_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 9.980e-18
Identity = 49/136 (36.03%), Postives = 79/136 (58.09%), Query Frame = 1
Query:   16 KHNRRHILGAVAEIWVLICLN---IVLFAWVGVILFAGTSEGEEKFPDLFEASWRLFVLFTTTNFPEIMMDALDQVRASIIYFAGFVILNVFFFAPLSLAMIFNVFRGGQSGIPRMEEEIRLESSAAAFALLDNRQ 414
            + + R IL  ++EI+ ++ L    I+ +AW+ ++LF+GT EG+ + P++ EASW   +L TT+NFP+IMM A +  R + ++F  F+   +FF   + LA+IFN F         +   IR E    AF LL  +Q
Sbjct:   68 RRSLRKILLVLSEIYSILSLVFVFILFYAWMSIVLFSGTPEGDAQMPNMIEASWHFLILLTTSNFPDIMMPAYNANRVTCLFFMLFICFGLFFLMNIVLAVIFNNFARYTEAEASLRHAIRKEKLTQAFQLLATKQ 203          
BLAST of mRNA_L-elsbetiae_contig16416.4361.1 vs. uniprot
Match: A0A1V9YH00_9STRA (Two-pore ion channel n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YH00_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.690e-17
Identity = 67/264 (25.38%), Postives = 118/264 (44.70%), Query Frame = 1
Query:   34 ILGAVAEIWVLICLNIVLFAWVGVILFAGTSEGEEKF--------------PDLFEASWRLFVLFTTTNFPEIMMDALDQVRASIIYFAGFVILNVFFFAPLSLAMIFNVFRGGQSGIPRMEEEIRLESSAAAFALL-------------------------DNRQTGQVSVADMGAFLLEVHSMRGVACREMSRLQDLMEEAGETTPEGGPSLNLQDFKDAVSVMDRSLR-HAEWITEVQWYFPRLYQSPGFRRLTRLVKHQR 705
            +L  V  +  L+ + +  FAWV  ILF  ++EG  ++              P +++A W LFVL TT NFP++ M A  + RASI++FA FV+  +FF   + LA+I+  F        R     RL     AF LL                          +R    + +    A   ++++ + +   +  +++ L +       +G   L+  +F    +V+D++L      + E+Q ++P +Y S GF  L+ +V+H R
Sbjct:  190 VLREVHHVLTLLIVYVAFFAWVATILFRQSTEGCVEYLLRHSHRIVGSLYMPTIYDAGWNLFVLLTTANFPDVFMPAYTERRASILFFAVFVVFGLFFLLNVLLAVIYQTFSSHVVAYKRARAATRLLKLQRAFELLVIVPKAQVAQSFSPTKGPHRRFDEWQSRSNASIPLDTSLALFAQLNAYKNIRYIKQCKMRLLFD---ILDTDGDERLSWPEFAQICAVLDKALTTRPRPLPEIQNWWPIVYYSSGFTALSHIVRHPR 450          
BLAST of mRNA_L-elsbetiae_contig16416.4361.1 vs. uniprot
Match: A0A024TGM3_9STRA (EF-hand domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TGM3_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 7.590e-16
Identity = 67/249 (26.91%), Postives = 120/249 (48.19%), Query Frame = 1
Query:   16 KHNRRHILGAVAEIWVLICLN---IVLFAWVGVILFAGTSEGEEKFPDLFEASWRLFVLFTTTNFPEIMMDALDQVRASIIYFAGFVILNVFFFAPLSLAMIFNVFRGGQSGIPRMEEEIRLESSAAAFALLDNRQTGQVSVADMGAFLLEVHSMRGVA-------------CREMSRLQD--LMEEAGETTPEGGPSLNLQDFKDAVSVMDRSLRHAEWI--TEVQWYFPRLYQSPGFRRLTRLVKHQ 702
            + + R IL  ++EI+ ++ L    I+ +AW+ ++LF+GT EG+ + P++  A W  +VL TT+NFP+IMM A +  RA+ ++F  F+   +FF   + LA+IFN F        ++   IR      AF LL    T          F  +  S  G+A             C+ +S +Q   + +        G   + L +F     V++ +L  A+ +  +EV+ + P +  +  +  L R+++ Q
Sbjct:  193 RRSLRKILLVLSEIYSILSLVFVFILFYAWMSIVLFSGTPEGDAQMPNMTTACWHFYVLLTTSNFPDIMMPAYNANRATCLFFMLFICFGLFFLMNVVLAVIFNNFARYTEAETKLRHGIRETKLTQAFHLLATHTT---------RFSRDGASADGIALDVCVRMFDELNRCKHVSHIQKAKMRQVFAALDTNGDNQIQLGEFLQTCDVLE-TLLFADDVFQSEVEVWCPAVVHASWYVALDRVIRSQ 431          
BLAST of mRNA_L-elsbetiae_contig16416.4361.1 vs. uniprot
Match: T0PXW7_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PXW7_SAPDV)

HSP 1 Score: 79.7 bits (195), Expect = 2.330e-13
Identity = 70/260 (26.92%), Postives = 106/260 (40.77%), Query Frame = 1
Query:   34 ILGAVAEIWVLICLNIVLFAWVGVILFAGTSEGEEKFPDLFEASWRLFVLFTTTNFPEIMMDALDQVRASIIYFAGFVILNVFFFAPLSLAMIFNVFRGGQSGIPRMEEEIRLESSAAAFALLDNRQTGQVSVADMGAFLLEVHSMRGVACREMSRLQDLMEEAGETTPEGG--------------PSLNLQDFKDAVSVMDR---------------SLRHAEWIT------EVQWYFPRLYQSPGFRRLTRLVKHQRV 708
            +L  V    VLI + +   +WV  +LF  T+EG     +++EASW LFVL TT NFP++ M A    R+S+++F  F+   +FF   + LA+ +  F    +   R    +++     AF LL +   GQ +  +  +  L  H           R  D     G   P+                P L     K   + +D                S+ H    T      E+Q Y PRLY S  F++L RLV   R+
Sbjct:  177 VLNEVQHALVLIFVYVAFCSWVATVLFHHTTEGTLYLGNIYEASWNLFVLLTTANFPDVFMPAYSTQRSSVLFFVFFLCFGLFFLLNVVLAVTYTAFTRQLAAFKRKRRRVQVSKLQVAFQLLCHVD-GQRAPTNYSSTELWAH-----------RHDDWTPPIGAAIPKATCLRLFETLNHYKNIPYLKHDKMKTLFATLDIAQDDQLSWPEFARLCSVFHTALATRTLPPPELQRYCPRLYYSAPFQKLARLVCDARL 424          
BLAST of mRNA_L-elsbetiae_contig16416.4361.1 vs. uniprot
Match: Q05KM6_PHYPA (Putative two-pore calcium channel n=2 Tax=Physcomitrium patens TaxID=3218 RepID=Q05KM6_PHYPA)

HSP 1 Score: 77.4 bits (189), Expect = 1.460e-12
Identity = 51/221 (23.08%), Postives = 105/221 (47.51%), Query Frame = 1
Query:   49 AEIWVLICLNIVLFAWVGVILFAGTSEGEEKFPDLFEASWRLFVLFTTTNFPEIMMDALDQVRASIIYFAGFVILNVFFFAPLSLAMIFNVFRGGQSGIPRMEEEIRLESSAAAFALLDNRQTGQVSVADMGAFLLEVHSMRG---VACREMSRLQDLMEEAGETTPEGGPSLNLQDFKDAVSVMDRSLRHAEWITEVQWYFPRLYQSPGFRRLTRLVKHQ 702
            A+I  L+ L ++  +W+  ++F  T +G+  F       +++ +LFTT+N P++ +DA    R   ++F  ++++ V+FF  L LA++++ F+G  + +   E   R +   AAF LLD ++ G +          E++  R    +A  +M  +   ++++G+   +    +   D  +A+S+         W      Y+P  Y S     +   V+ Q
Sbjct:  234 ADIAALLGLYLLFSSWLAYVMFEDTVQGKTTFTSYSTTLYQMAILFTTSNSPDVWLDAYKSSRFYSLFFILYILIGVYFFMNLVLAVVYDSFKGQLAKLLLNEANERQQVLGAAFNLLDEQKRGFLDKLQCARLFKELNKYRSLPKIADDDMEAVFCALDDSGDFRID---RVEFNDLCNAISLKFDKADEPSWFE----YYPAFYNSAALNAIKAFVRSQ 447          
BLAST of mRNA_L-elsbetiae_contig16416.4361.1 vs. uniprot
Match: UPI00201A8D4D (two pore calcium channel protein 1A isoform X1 n=4 Tax=Ricinus communis TaxID=3988 RepID=UPI00201A8D4D)

HSP 1 Score: 76.6 bits (187), Expect = 2.650e-12
Identity = 57/223 (25.56%), Postives = 100/223 (44.84%), Query Frame = 1
Query:   37 LGAVAEIWVLICLNIVLFAWVGVILFAGTSEGEEKFPDLFEASWRLFVLFTTTNFPEIMMDALDQVRASIIYFAGFVILNVFFFAPLSLAMIFNVFRGGQSGIPRMEEEIRLESSAAAFALLDNRQTGQVSVADMGAFLLEVHSMRGVACREMSRLQDLMEEAGETTPEGGPSLNLQDFKDAVSVMDRSLRHAEWITEVQWYFPRLYQSPGFRRLTRLVKHQR 705
            LG    I  +  L +V  +WV  I+F  T +GE  F    +  + +F+LFTT+N P++ + A    R   ++F  +V+L V+F   L LA +++ F+G  +      + I+      AF L+D    G V+       L E++  R +        + + EE  +T       ++L +F D   V+    +  + I     YFP +Y SP    L    + ++
Sbjct:  224 LGTYLNILAVCLLFLVFSSWVAYIMFEDTQQGELVFTSYGKTLYEMFILFTTSNNPDVWIPAYKASRWYCLFFVLYVLLAVYFITSLILAAVYDSFKGQLAKQVSQADRIKKSMLVKAFNLIDEYNVGYVNKDQCFRLLGELNRFRTLPKILKEEFEYIFEELDDTRDF---KIDLNEFGDLCDVIAVRFQKDD-IPSCFEYFPSIYHSPFSENLKAFARSRK 442          
BLAST of mRNA_L-elsbetiae_contig16416.4361.1 vs. uniprot
Match: A0A328D0I1_9ASTE (EF-hand domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328D0I1_9ASTE)

HSP 1 Score: 73.6 bits (179), Expect = 2.930e-11
Identity = 52/220 (23.64%), Postives = 102/220 (46.36%), Query Frame = 1
Query:   37 LGAVAEIWVLICLNIVLFAWVGVILFAGTSEGEEKFPDLFEASWRLFVLFTTTNFPEIMMDALDQVRASIIYFAGFVILNVFFFAPLSLAMIFNVFRGGQSGIPRMEEEIRLESSAAAFALLDNRQTGQVSVADMGAFLLEVHSMRGVACREMSRLQDLMEEAGETTPEGGPSLNLQDFKDAVSVMDRSLRHAEWITEVQWYFPRLYQSPGFRRLTRLVK 696
            LG    + VL  L ++  +W+G ++F  T +G+  F        ++FVLFTT+N P++ + A  + R   ++F  +V+L V+F   L LA++++ F+   +     ++ +RL     AF+L+D    G ++         E++  R +        + + +E  +T       ++L +F D    +    +  E +   +  FP LY S    +L   V+
Sbjct:  215 LGTYLNVMVLSVLFLLFCSWLGYVIFEDTQQGKTVFSSYSATLSQMFVLFTTSNNPDVWIPAYKESRWYCLFFVLYVLLGVYFVTNLILAVVYDSFKSELAKRVAEKDRVRLRILRKAFSLVDYHSCGYLNKEQCIHLFEELNKYRSLPKISRDDFELIFDELDDTRDF---KIDLDEFFDLCKAISLRFQEEESLPIFET-FPNLYHSTTSEKLRNFVR 430          
BLAST of mRNA_L-elsbetiae_contig16416.4361.1 vs. uniprot
Match: UPI00125E8497 (two pore calcium channel protein 1A-like isoform X1 n=3 Tax=Ipomoea TaxID=4119 RepID=UPI00125E8497)

HSP 1 Score: 73.6 bits (179), Expect = 2.940e-11
Identity = 48/219 (21.92%), Postives = 106/219 (48.40%), Query Frame = 1
Query:   40 GAVAEIWVLICLNIVLFAWVGVILFAGTSEGEEKFPDLFEASWRLFVLFTTTNFPEIMMDALDQVRASIIYFAGFVILNVFFFAPLSLAMIFNVFRGGQSGIPRMEEEIRLESSAAAFALLDNRQTGQVSVADMGAFLLEVHSMRGVACREMSRLQDLMEEAGETTPEGGPSLNLQDFKDAVSVMDRSLRHAEWITEVQWYFPRLYQSPGFRRLTRLVK 696
            G    + VL  L ++  +W+G ++F  T +G+  F       + +F+LFTT+N P++ + A  + R   ++F  +V+L V+F   L LA++++ F+   +     ++ +RL +   AF+L+D+   G ++         E+++ R +        + + +E  +T       ++L +F D  + +    +  + +   +  FP +Y S    +L + V+
Sbjct:  223 GTYLNVMVLSALFLLFSSWLGYVIFEDTEQGKTVFTSFGITLYEMFILFTTSNNPDVWIPAYKESRWYCLFFVLYVLLGVYFVTNLILAVVYDSFKSELAKQVSEKDRVRLRTLKKAFSLVDDNNCGFLNKEQCIRLFEELNNYRSLPKISRDDFELIFDELDDTRDF---KIDLDEFFDLCNAISLRFQKEDSLPVFET-FPYVYHSTTSEKLRKFVR 437          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16416.4361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNV4_ECTSI2.450e-12477.18Calcium channel n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A6H5KIA0_9PHAE1.010e-11977.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W4GNX5_9STRA9.980e-1836.03EF-hand domain-containing protein n=1 Tax=Aphanomy... [more]
A0A1V9YH00_9STRA2.690e-1725.38Two-pore ion channel n=1 Tax=Achlya hypogyna TaxID... [more]
A0A024TGM3_9STRA7.590e-1626.91EF-hand domain-containing protein n=2 Tax=Aphanomy... [more]
T0PXW7_SAPDV2.330e-1326.92Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
Q05KM6_PHYPA1.460e-1223.08Putative two-pore calcium channel n=2 Tax=Physcomi... [more]
UPI00201A8D4D2.650e-1225.56two pore calcium channel protein 1A isoform X1 n=4... [more]
A0A328D0I1_9ASTE2.930e-1123.64EF-hand domain-containing protein n=3 Tax=Cuscuta ... [more]
UPI00125E84972.940e-1121.92two pore calcium channel protein 1A-like isoform X... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16416contigL-elsbetiae_contig16416:131..3430 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score374.4
Seed ortholog evalue4.1e-101
Seed eggNOG ortholog2880.D7FNV4
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.membrane depolarization during action potential
EggNOG OGsKOG2301@1,KOG2301@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionIon transport domain
Ec32 orthologEc-12_003230.1
Exons4
Model size750
Cds size750
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16416.4361.1prot_L-elsbetiae_contig16416.4361.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig16416 131..3430 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815678.533789-CDS-L-elsbetiae_contig16416:130..3421622815678.533789-CDS-L-elsbetiae_contig16416:130..342Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16416 131..342 +
1691683032.5892918-CDS-L-elsbetiae_contig16416:130..3421691683032.5892918-CDS-L-elsbetiae_contig16416:130..342Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16416 131..342 +
1622815678.5441005-CDS-L-elsbetiae_contig16416:1179..13621622815678.5441005-CDS-L-elsbetiae_contig16416:1179..1362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16416 1180..1362 +
1691683032.6019192-CDS-L-elsbetiae_contig16416:1179..13621691683032.6019192-CDS-L-elsbetiae_contig16416:1179..1362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16416 1180..1362 +
1622815678.5537503-CDS-L-elsbetiae_contig16416:1764..19451622815678.5537503-CDS-L-elsbetiae_contig16416:1764..1945Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16416 1765..1945 +
1691683032.6097734-CDS-L-elsbetiae_contig16416:1764..19451691683032.6097734-CDS-L-elsbetiae_contig16416:1764..1945Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16416 1765..1945 +
1622815678.5667317-CDS-L-elsbetiae_contig16416:3256..34301622815678.5667317-CDS-L-elsbetiae_contig16416:3256..3430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16416 3257..3430 +
1691683032.6179001-CDS-L-elsbetiae_contig16416:3256..34301691683032.6179001-CDS-L-elsbetiae_contig16416:3256..3430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16416 3257..3430 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig16416.4361.1

>prot_L-elsbetiae_contig16416.4361.1 ID=prot_L-elsbetiae_contig16416.4361.1|Name=mRNA_L-elsbetiae_contig16416.4361.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=250bp
MYLTPKHNRRHILGAVAEIWVLICLNIVLFAWVGVILFAGTSEGEEKFPD
LFEASWRLFVLFTTTNFPEIMMDALDQVRASIIYFAGFVILNVFFFAPLS
LAMIFNVFRGGQSGIPRMEEEIRLESSAAAFALLDNRQTGQVSVADMGAF
LLEVHSMRGVACREMSRLQDLMEEAGETTPEGGPSLNLQDFKDAVSVMDR
SLRHAEWITEVQWYFPRLYQSPGFRRLTRLVKHQRVTLWPGGLGLSRFSV
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mRNA from alignment at L-elsbetiae_contig16416:131..3430+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig16416.4361.1 ID=mRNA_L-elsbetiae_contig16416.4361.1|Name=mRNA_L-elsbetiae_contig16416.4361.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3300bp|location=Sequence derived from alignment at L-elsbetiae_contig16416:131..3430+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTATTTGACTCCAAAACACAATCGCAGGCACATCCTGGGCGCCGTGGC CGAGATCTGGGTGCTGATATGCCTGAACATTGTCCTGTTCGCCTGGGTGG GCGTCATCCTGTTCGCCGGCACCTCGGAGGGGGAAGAGAAGTTCCCCGAC CTGTTCGAGGCCAGCTGGCGGCTCTTCGTGCTCTTTACAACGACCAACTT CCCGGAGATAATGTGCGTGAATTTTATTTGACCGTGAGGATATGTTTATA TACTTCGTATATATCTATTGCACGGTTTCCGTGATGAAAGTGCTCGTGAG CACCGCTACTACCGCTGTACAATTTAGTTCGAGTCAGATGCGCTGGACCT TCCTTGTGAAGGCGACGGTAGTTGATCGAGCAAAATGATTTGTTGACGGC CATGGTGTATGAGCTTATTTTTATAATTATTGTGTTTGTTCCGTTTTTGA GGGGTCTCTTTGCTGCTGCTGCTACTGTGTACACCTCAAAACCTATGTAT GTGAATGTATACTCCGACGCATGTACATGTTGTAGCAGTTTCGTGGGTTT CGTTTTGCAAAAGGCGTTGTTTAGTGTTTGTTGACTCTGTCGGTGCGATG CAGGTGCGTCTTGTGTGTTTTTTCTCTGAAATACGACAGATAAGAAGACC GTTTTCAATATGTAGTTGAAATTCACTTCAGCGACAGCAGCTTGTGAATT TGGTTTGTATGTATCGTGAATGTGGTTCCAAGACGTCGGGTGTACACTTT TTGTTTGTGTTTCTTAATAGCTCGAGAAAATTGTTCCCCCCCTCAGCCGC TACAGCGAGAGCTAGGTAGATAGATACACGAGCAATGGTCAAACGACCAC GCCCAGAGCAACTAATGAATACCTCCCGAGTGCGCCCTCAAATCCCAATG GAATGCGTGTGCCCTCCTCCGACCAGAGCACAAGCCGCCTCTTTCCTACC CCCCCCACATGATTTGATTTCCGTCGACCCCTTTTCTCTCTCTCTTAAAA CTCAAAACCCAACCACCAACTCTGCAATACTGCTGCTACACGTATGCAGG ATGGACGCGCTTGACCAGGTCCGCGCGTCGATCATCTACTTCGCCGGCTT CGTGATCCTGAACGTCTTCTTCTTCGCGCCGCTCTCGCTGGCGATGATCT TCAACGTCTTCCGGGGGGGGCAGTCGGGCATCCCCCGCATGGAGGAGGAG ATCAGGCTGGAGAGCTCCGCGGCGGCCTTCGCGTGCGTCCCTCGTGCTGC TGTATGTGTCGTGCATCCGTGTTTTTGGTTGTTTTGGTGTTGCGATTCGG AAAAATATTTTGTGTTTGCCGGCAGGTGGCCATATGTTTCGGGTATGTGT GTGCGTGTGTGTGTGTGTGTGTGTGTGTCGTGGCTACGTAGACGAGGGCA GGAGACAAGATCTTGTTGTTCAGCCTCAGCTCGTGTATTAGTTTCTAGTT TTTGTCGCATGCGTGTGGTGAACGGTAGAGTAAGAGCCCGCCCGCTGATT CTTCTGCCTTTGCTGCTGCCTTTGCTACTGCTTTTTCTGCTGCTGCTTTG CTGCTGCCTCTGCCTCTGCCTCTGCTGCTGCTGCTGCTGCTGCTGCTGCT GCTGCTGCTGATGCTGATGCTGATGCTGATGCAGGCTTTTGGACAACCGC CAAACGGGGCAGGTGTCCGTCGCCGACATGGGCGCCTTCCTGCTGGAGGT GCACTCCATGCGAGGCGTCGCCTGCCGAGAGATGAGCCGGCTGCAGGACC TCATGGAGGAGGCCGGCGAGACGACGCCCGAGGGGGGGCCGTCGCTGAAC CTGCAAGATTTCAAGGTGATGGGGGGAGGGGGAGGGGGGCGGTCGTTCCG AGCTTTCGAAAGGCTGGCCTGCATCCTGTGTAGTACGAGTTGTAGTCCAA AGCGGCTTTTGTGTAGCGCAGTACTAAACTGGGAAGGCTCGAAGCACTCT TCGTCCATATGATGCCACTATGACGTGCATACATATACACGTACGGTATT GTTCGAGTCGACTCGTGCACGAAGAACGGCATATTTCTGGGCAGGGAAGG CAGAGGTGTCTTCTTTCTCTACTCTCTCTACTATTTTCATTTTCCGAACT CGAAAAATGTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCC CAACCGTGTGTTAGTGTGCTTGGGACATTCGCCTTCGGGGGGGGGGGTTA CAGGGGGGGTTGTCAGTCCAGGCGGCACAGTCGATGGACGTATGTACATA TATGCAGTATGTATCTGTGTNNNNNNNNTTGTTGGTGTGTGTTGCTGTTG ATGTGTGCGTCTGCTGACGGTTGGTCGAGGTGATAGTTGTTATTGTTGTT GTCAGTCCAGGCGGCACAGTCGATGGACGTATGTACATATATGCAGTATG TATCTGTGTACGTGTGTCTAGGCTGCACTGCCTTGCCGCGATGCCATCCA TGCTGTTCAGAGTGCTTCCTCTCCATGTGTTGCGGTAGAAATCCCCGGGT AAGGGTGCGTGCGGGTGCATCGGCAGGCCTCTGCACCGCCAAGCATCCAA AGCCCGCAGATCAGGCCGCTTTGCGACTTTTACCGGCTGGGAGCACAGAA GAGTTCCGCGAAAGCCGCGACTGACTGACTGACTGACTTTCTGTCTACAT TATTCATTATCCATCCATTATGTCGATCCCCCTCCGCGCATCGCCGTGTC GTGTGTTTTTCTTGGCACTTTTCGATGTGTAAAACTAAAAAAAAACATTC CTCACTTTCGTGTGTCCTGCTTCTTTTTTCGTGTCTGGTCTTGTCTCGTC TCGTCTTGTCTTGTCGTGTCTCGTCTTGTCTTGTCTTGTCTCGTCTTGTC TTGTCGTGTCTCGTCTTGTTTCGTCTTGTCTTGTCTTGTCTCGTCTTGTC TTGTCTTGTCGTGTCGTGTCTTGTCTCGCCTCGTATTGTCTTGTCTTGTC TTGTCTCGTCTTGTCTCGTCTTGTCTTGTCTCGTCGTGTCTTGTTTCGTG TTGTCTTGTCTCGTCTTGTCTTGTCCTGTCTTTGTCTTGTCTCGTGTTGT CTTGTCTTGTCTTGTCGTGTCTCGTCTCGTCGTGTCTTGTCGTGTCTTGT CGTGTCTTGTCTCGTCTTGTCTGCAGGATGCCGTGAGCGTGATGGATCGC TCCCTCCGGCACGCGGAGTGGATCACGGAGGTGCAGTGGTACTTCCCGCG GCTCTACCAGTCCCCGGGCTTCCGCCGCCTCACCAGGCTCGTCAAGCACC AGCGCGTCACGCTGTGGCCCGGCGGGCTTGGGCTGTCGCGATTTTCGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig16416:131..3430+

>mRNA_L-elsbetiae_contig16416.4361.1 ID=mRNA_L-elsbetiae_contig16416.4361.1|Name=mRNA_L-elsbetiae_contig16416.4361.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1500bp|location=Sequence derived from alignment at L-elsbetiae_contig16416:131..3430+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTATTTGACTCCAAAACACAATCGCAGGCACATCCTGGGCGCCGTGGC
CGAGATCTGGGTGCTGATATGCCTGAACATTGTCCTGTTCGCCTGGGTGG
GCGTCATCCTGTTCGCCGGCACCTCGGAGGGGGAAGAGAAGTTCCCCGAC
CTGTTCGAGGCCAGCTGGCGGCTCTTCGTGCTCTTTACAACGACCAACTT
CCCGGAGATAATATGTATTTGACTCCAAAACACAATCGCAGGCACATCCT
GGGCGCCGTGGCCGAGATCTGGGTGCTGATATGCCTGAACATTGTCCTGT
TCGCCTGGGTGGGCGTCATCCTGTTCGCCGGCACCTCGGAGGGGGAAGAG
AAGTTCCCCGACCTGTTCGAGGCCAGCTGGCGGCTCTTCGTGCTCTTTAC
AACGACCAACTTCCCGGAGATAATGATGGACGCGCTTGACCAGGTCCGCG
CGTCGATCATCTACTTCGCCGGCTTCGTGATCCTGAACGTCTTCTTCTTC
GCGCCGCTCTCGCTGGCGATGATCTTCAACGTCTTCCGGGGGGGGCAGTC
GGGCATCCCCCGCATGGAGGAGGAGATCAGGCTGGAGAGCTCCGCGGCGG
CCTTCGCGATGGACGCGCTTGACCAGGTCCGCGCGTCGATCATCTACTTC
GCCGGCTTCGTGATCCTGAACGTCTTCTTCTTCGCGCCGCTCTCGCTGGC
GATGATCTTCAACGTCTTCCGGGGGGGGCAGTCGGGCATCCCCCGCATGG
AGGAGGAGATCAGGCTGGAGAGCTCCGCGGCGGCCTTCGCGCTTTTGGAC
AACCGCCAAACGGGGCAGGTGTCCGTCGCCGACATGGGCGCCTTCCTGCT
GGAGGTGCACTCCATGCGAGGCGTCGCCTGCCGAGAGATGAGCCGGCTGC
AGGACCTCATGGAGGAGGCCGGCGAGACGACGCCCGAGGGGGGGCCGTCG
CTGAACCTGCAAGATTTCAAGGCTTTTGGACAACCGCCAAACGGGGCAGG
TGTCCGTCGCCGACATGGGCGCCTTCCTGCTGGAGGTGCACTCCATGCGA
GGCGTCGCCTGCCGAGAGATGAGCCGGCTGCAGGACCTCATGGAGGAGGC
CGGCGAGACGACGCCCGAGGGGGGGCCGTCGCTGAACCTGCAAGATTTCA
AGGATGCCGTGAGCGTGATGGATCGCTCCCTCCGGCACGCGGAGTGGATC
ACGGAGGTGCAGTGGTACTTCCCGCGGCTCTACCAGTCCCCGGGCTTCCG
CCGCCTCACCAGGCTCGTCAAGCACCAGCGCGTCACGCTGTGGCCCGGCG
GGCTTGGGCTGTCGCGATTTTCGGTGGATGCCGTGAGCGTGATGGATCGC
TCCCTCCGGCACGCGGAGTGGATCACGGAGGTGCAGTGGTACTTCCCGCG
GCTCTACCAGTCCCCGGGCTTCCGCCGCCTCACCAGGCTCGTCAAGCACC
AGCGCGTCACGCTGTGGCCCGGCGGGCTTGGGCTGTCGCGATTTTCGGTG
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