mRNA_L-elsbetiae_contig16307.4307.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A6H5KCH1_9PHAE (Mitochondrial inner membrane protease ATP23 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCH1_9PHAE) HSP 1 Score: 287 bits (734), Expect = 5.380e-97 Identity = 133/147 (90.48%), Postives = 140/147 (95.24%), Query Frame = 1 Query: 13 PKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTKDAKGKLSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGCEDRVSQ 453 PKVKF+REKLEKLGCEMPT FTCRPCEGMDISGGF+PPTK A GK SRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDR+NCLHVACTEIRASNTSGECSF+MEVRRGHLKWGGQQKECVKRRAELSVKATPGC D+ ++ Sbjct: 42 PKVKFIREKLEKLGCEMPTGMFTCRPCEGMDISGGFIPPTKGADGKPSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDRTNCLHVACTEIRASNTSGECSFDMEVRRGHLKWGGQQKECVKRRAELSVKATPGCSDKAAE 188
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A2R5G548_9STRA (Mitochondrial inner membrane protease ATP23 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G548_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.070e-40 Identity = 73/152 (48.03%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 1 SLTGPKVKFLREKLEKLGCEMPTSRF-TCRPCEGMDISGGFVPPTKDAKGKLSRAEVVLCSDK----GVNQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGCED 441 ++T KVK +RE +EKLGC++P F CRPCE I G F P + KG V+LC D V+ ++ T AHELIHAYD CR KLD NCLH+ACTEIRA+N SG+C+ E+ RG GQ + C++RRAELS+ C+D Sbjct: 58 AMTSEKVKIVREGMEKLGCDVPLPEFFRCRPCENEGIIGAFSPANESDKG-----HVLLCEDNIEKFSVSSAHVERTAAHELIHAYDHCRAKLDWQNCLHLACTEIRAANLSGDCTMKAEMGRGQFSIKGQGERCIRRRAELSIAGHEHCKD 204
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A7S2W3M8_9STRA (Mitochondrial inner membrane protease ATP23 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W3M8_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.160e-40 Identity = 72/156 (46.15%), Postives = 94/156 (60.26%), Query Frame = 1 Query: 1 SLTGPKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTKDAKGKLSRAEVVLCSDK----GVNQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGCEDRVSQA 456 SL KVK L +++EK GCE+P F C+PC+ I F + +VV+CSD + Q +D T+AHELIHAYD CR LD NCLH+ACTE+RA+N SG+C F E RG K+ GQ ++C++RRAELSV P C + QA Sbjct: 26 SLENIKVKHLVDEMEKAGCEVPRQFFACKPCQDEGIIAAFASDVDQGQ------QVVICSDNIEKFKIGQKHIDRTLAHELIHAYDDCRANLDWKNCLHIACTEVRAANLSGDCYFKEEFNRGQFKFKGQGEKCIRRRAELSVGMHPHCTNIAKQA 175
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A835Z5N3_9STRA (Mitochondrial inner membrane protease ATP23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5N3_9STRA) HSP 1 Score: 136 bits (343), Expect = 8.830e-38 Identity = 68/152 (44.74%), Postives = 99/152 (65.13%), Query Frame = 1 Query: 13 PKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTK---DAKGKLSRAEVVLCSDKGV--NQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGCEDRVSQ 453 P+V FL+ +EK+GC++P CR C+ ++GGF + +G + ++LC + + Q ++D T+AHEL+HA+D CRVK D +NCLH ACTEIRASN SGEC++ ME RG++ QQ++CVKRRA LS+ A P C+ + Q Sbjct: 26 PRVTFLKAAIEKMGCKLPDESIECRRCDE-SMTGGFTLNAEAGASQQGGKPQPTIILCEEVQIMRQQRVVDSTLAHELVHAFDACRVKADFTNCLHHACTEIRASNLSGECAWKMEWDRGNVAITRQQEKCVKRRAALSLAANPSCKGQEQQ 176
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A427XWK6_9TREE (Mitochondrial inner membrane protease ATP23 n=1 Tax=Apiotrichum porosum TaxID=105984 RepID=A0A427XWK6_9TREE) HSP 1 Score: 127 bits (320), Expect = 7.540e-34 Identity = 66/143 (46.15%), Postives = 89/143 (62.24%), Query Frame = 1 Query: 7 TGPKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTKDAKGKLSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGC 435 T P + FL + L+ GCE P+S C PC+ +GGF P A G ++LC ++ ++ M+ T+AHELIHAYD C+ K+D N H ACTEIRA+N SG+C ++ EV+RGH + Q + CVKRRA LSVK P C Sbjct: 77 TSPMIVFLLKHLKMAGCEFPSSAMQCHPCDP-SRAGGFSP----AHG------ILLCQNRVSSKKHMEDTLAHELIHAYDHCKFKVDWMNLRHHACTEIRAANLSGDCRWSREVQRGHYAFSKQHQACVKRRAVLSVKDHPNC 208
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A8H7Q8S6_9FUNG (Mitochondrial inner membrane protease ATP23 n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q8S6_9FUNG) HSP 1 Score: 126 bits (316), Expect = 2.930e-33 Identity = 62/143 (43.36%), Postives = 87/143 (60.84%), Query Frame = 1 Query: 13 PKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTKDAKGKLSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGCED 441 P V+F+ + L+K+GC M F C PC+ SGGF P + ++LC ++ +++ + TM HE+IH YD CR K+D SNC H AC+E+RA++ SG+C + EVRRG + Q + CVKRRA LSVK P C D Sbjct: 78 PNVRFMLDNLKKVGCAMTKEDFKCMPCDETR-SGGFSP----------QDGILLCQNRFFSKSHQEDTMVHEMIHMYDNCRFKVDWSNCKHHACSEVRAASLSGDCKWTREVRRGFYTFTKQHQACVKRRAILSVKQNPACAD 209
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A4P9XF07_9FUNG (Mitochondrial inner membrane protease ATP23 n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9XF07_9FUNG) HSP 1 Score: 125 bits (315), Expect = 4.030e-33 Identity = 64/147 (43.54%), Postives = 92/147 (62.59%), Query Frame = 1 Query: 7 TGPKVKFLREKLEKLGCEMPTSRFTCRPCEG---MDISGGFVPPTKDAKGKLSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKE-CVKRRAELSVKATPGC 435 + P V+F+R++L + GC P F C+PC+ I+GGFVP +G +VLC + VN+ M+ TMAHELIHA+DQC ++D S C H+AC+EIRA+N SG+C F E++RG+ + + CVKRRA LS++ C Sbjct: 70 SSPIVRFMRDELARAGCPFPPGLFRCQPCDAGAPAAIAGGFVP----TQG------IVLCQETLVNRDHMEDTMAHELIHAFDQCTTRVDWSQCAHLACSEIRAANLSGDCKFGRELKRGNWALAAKHHQACVKRRAILSLQNAKNC 206
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A0C9X6V8_9AGAR (Mitochondrial inner membrane protease ATP23 n=2 Tax=Laccaria TaxID=29882 RepID=A0A0C9X6V8_9AGAR) HSP 1 Score: 125 bits (314), Expect = 4.400e-33 Identity = 63/143 (44.06%), Postives = 87/143 (60.84%), Query Frame = 1 Query: 7 TGPKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTKDAKGKLSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGC 435 + P + F+ + L+ GCE+P S C PC+ SGGF P VVLCS +Q M++T+AHELIH YDQC+ K+D SN H AC+EIRA+N SG+C F+ E+RRG + + Q + C++RR+ SV A P C Sbjct: 64 SSPIIVFMLKHLKLSGCEVPPSNILCAPCD-QTKSGGFSPDP---------GAVVLCSGHFFSQKHMEYTLAHELIHMYDQCKFKVDWSNLRHHACSEIRANNLSGDCRFSQELRRGFIAFSKQHQACIRRRSVESVAANPAC 196
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A7S3BYE0_9VIRI (Mitochondrial inner membrane protease ATP23 n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BYE0_9VIRI) HSP 1 Score: 123 bits (309), Expect = 8.060e-33 Identity = 63/142 (44.37%), Postives = 87/142 (61.27%), Query Frame = 1 Query: 13 PKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTKDAKGKLSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVK-LDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGC 435 P V+F+ +K+E+ GC +P S +C C +++GGF P VVLC++ +Q +D + HEL+HAYDQCRVK +D +C H AC+EIRA+N SG+C + EV RG+L Q+ CVKRRA LSV P C Sbjct: 22 PFVRFMLQKMEEAGCAVPKSFISCETCGSAEVNGGFRPDEG----------VVLCAEHMHSQADVDAVLTHELVHAYDQCRVKNIDWCDCNHHACSEIRAANLSGDCWMSREVARGNLTLSKGQQACVKRRAALSVAMNPNC 153
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A4P9Y0Y2_9FUNG (Mitochondrial inner membrane protease ATP23 n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y0Y2_9FUNG) HSP 1 Score: 124 bits (310), Expect = 8.150e-33 Identity = 60/141 (42.55%), Postives = 88/141 (62.41%), Query Frame = 1 Query: 13 PKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTKDAKGKLSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGC 435 P V+F+ +L K GC + C PC+ + SGGF P + + LC ++ +N+T M+ T++HELIHAYD CR K+ ++ H AC+EIRA+N SG+C + E+RRG++ + Q + CVKRRA LSVK +P C Sbjct: 38 PMVRFMMAELSKAGCPFESRHLRCLPCD-LTRSGGFGP----------KEGIALCQNRFINKTHMEDTLSHELIHAYDHCRFKVQWNDIKHHACSEIRAANLSGDCKWTRELRRGNISFVKQHQACVKRRAILSVKQSPSC 167 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16307.4307.1 >prot_L-elsbetiae_contig16307.4307.1 ID=prot_L-elsbetiae_contig16307.4307.1|Name=mRNA_L-elsbetiae_contig16307.4307.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=152bp SLTGPKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTKDAKGKback to top mRNA from alignment at L-elsbetiae_contig16307:1290..2998+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16307.4307.1 ID=mRNA_L-elsbetiae_contig16307.4307.1|Name=mRNA_L-elsbetiae_contig16307.4307.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1709bp|location=Sequence derived from alignment at L-elsbetiae_contig16307:1290..2998+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16307:1290..2998+ >mRNA_L-elsbetiae_contig16307.4307.1 ID=mRNA_L-elsbetiae_contig16307.4307.1|Name=mRNA_L-elsbetiae_contig16307.4307.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=912bp|location=Sequence derived from alignment at L-elsbetiae_contig16307:1290..2998+ (Laminarionema elsbetiae ELsaHSoW15)back to top |