mRNA_L-elsbetiae_contig16307.4307.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig16307.4307.1
Unique NamemRNA_L-elsbetiae_contig16307.4307.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A6H5KCH1_9PHAE (Mitochondrial inner membrane protease ATP23 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCH1_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 5.380e-97
Identity = 133/147 (90.48%), Postives = 140/147 (95.24%), Query Frame = 1
Query:   13 PKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTKDAKGKLSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGCEDRVSQ 453
            PKVKF+REKLEKLGCEMPT  FTCRPCEGMDISGGF+PPTK A GK SRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDR+NCLHVACTEIRASNTSGECSF+MEVRRGHLKWGGQQKECVKRRAELSVKATPGC D+ ++
Sbjct:   42 PKVKFIREKLEKLGCEMPTGMFTCRPCEGMDISGGFIPPTKGADGKPSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDRTNCLHVACTEIRASNTSGECSFDMEVRRGHLKWGGQQKECVKRRAELSVKATPGCSDKAAE 188          
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A2R5G548_9STRA (Mitochondrial inner membrane protease ATP23 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G548_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.070e-40
Identity = 73/152 (48.03%), Postives = 94/152 (61.84%), Query Frame = 1
Query:    1 SLTGPKVKFLREKLEKLGCEMPTSRF-TCRPCEGMDISGGFVPPTKDAKGKLSRAEVVLCSDK----GVNQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGCED 441
            ++T  KVK +RE +EKLGC++P   F  CRPCE   I G F P  +  KG      V+LC D      V+   ++ T AHELIHAYD CR KLD  NCLH+ACTEIRA+N SG+C+   E+ RG     GQ + C++RRAELS+     C+D
Sbjct:   58 AMTSEKVKIVREGMEKLGCDVPLPEFFRCRPCENEGIIGAFSPANESDKG-----HVLLCEDNIEKFSVSSAHVERTAAHELIHAYDHCRAKLDWQNCLHLACTEIRAANLSGDCTMKAEMGRGQFSIKGQGERCIRRRAELSIAGHEHCKD 204          
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A7S2W3M8_9STRA (Mitochondrial inner membrane protease ATP23 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W3M8_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.160e-40
Identity = 72/156 (46.15%), Postives = 94/156 (60.26%), Query Frame = 1
Query:    1 SLTGPKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTKDAKGKLSRAEVVLCSDK----GVNQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGCEDRVSQA 456
            SL   KVK L +++EK GCE+P   F C+PC+   I   F       +      +VV+CSD      + Q  +D T+AHELIHAYD CR  LD  NCLH+ACTE+RA+N SG+C F  E  RG  K+ GQ ++C++RRAELSV   P C +   QA
Sbjct:   26 SLENIKVKHLVDEMEKAGCEVPRQFFACKPCQDEGIIAAFASDVDQGQ------QVVICSDNIEKFKIGQKHIDRTLAHELIHAYDDCRANLDWKNCLHIACTEVRAANLSGDCYFKEEFNRGQFKFKGQGEKCIRRRAELSVGMHPHCTNIAKQA 175          
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A835Z5N3_9STRA (Mitochondrial inner membrane protease ATP23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5N3_9STRA)

HSP 1 Score: 136 bits (343), Expect = 8.830e-38
Identity = 68/152 (44.74%), Postives = 99/152 (65.13%), Query Frame = 1
Query:   13 PKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTK---DAKGKLSRAEVVLCSDKGV--NQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGCEDRVSQ 453
            P+V FL+  +EK+GC++P     CR C+   ++GGF    +     +G   +  ++LC +  +   Q ++D T+AHEL+HA+D CRVK D +NCLH ACTEIRASN SGEC++ ME  RG++    QQ++CVKRRA LS+ A P C+ +  Q
Sbjct:   26 PRVTFLKAAIEKMGCKLPDESIECRRCDE-SMTGGFTLNAEAGASQQGGKPQPTIILCEEVQIMRQQRVVDSTLAHELVHAFDACRVKADFTNCLHHACTEIRASNLSGECAWKMEWDRGNVAITRQQEKCVKRRAALSLAANPSCKGQEQQ 176          
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A427XWK6_9TREE (Mitochondrial inner membrane protease ATP23 n=1 Tax=Apiotrichum porosum TaxID=105984 RepID=A0A427XWK6_9TREE)

HSP 1 Score: 127 bits (320), Expect = 7.540e-34
Identity = 66/143 (46.15%), Postives = 89/143 (62.24%), Query Frame = 1
Query:    7 TGPKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTKDAKGKLSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGC 435
            T P + FL + L+  GCE P+S   C PC+    +GGF P    A G      ++LC ++  ++  M+ T+AHELIHAYD C+ K+D  N  H ACTEIRA+N SG+C ++ EV+RGH  +  Q + CVKRRA LSVK  P C
Sbjct:   77 TSPMIVFLLKHLKMAGCEFPSSAMQCHPCDP-SRAGGFSP----AHG------ILLCQNRVSSKKHMEDTLAHELIHAYDHCKFKVDWMNLRHHACTEIRAANLSGDCRWSREVQRGHYAFSKQHQACVKRRAVLSVKDHPNC 208          
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A8H7Q8S6_9FUNG (Mitochondrial inner membrane protease ATP23 n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q8S6_9FUNG)

HSP 1 Score: 126 bits (316), Expect = 2.930e-33
Identity = 62/143 (43.36%), Postives = 87/143 (60.84%), Query Frame = 1
Query:   13 PKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTKDAKGKLSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGCED 441
            P V+F+ + L+K+GC M    F C PC+    SGGF P          +  ++LC ++  +++  + TM HE+IH YD CR K+D SNC H AC+E+RA++ SG+C +  EVRRG   +  Q + CVKRRA LSVK  P C D
Sbjct:   78 PNVRFMLDNLKKVGCAMTKEDFKCMPCDETR-SGGFSP----------QDGILLCQNRFFSKSHQEDTMVHEMIHMYDNCRFKVDWSNCKHHACSEVRAASLSGDCKWTREVRRGFYTFTKQHQACVKRRAILSVKQNPACAD 209          
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A4P9XF07_9FUNG (Mitochondrial inner membrane protease ATP23 n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9XF07_9FUNG)

HSP 1 Score: 125 bits (315), Expect = 4.030e-33
Identity = 64/147 (43.54%), Postives = 92/147 (62.59%), Query Frame = 1
Query:    7 TGPKVKFLREKLEKLGCEMPTSRFTCRPCEG---MDISGGFVPPTKDAKGKLSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKE-CVKRRAELSVKATPGC 435
            + P V+F+R++L + GC  P   F C+PC+      I+GGFVP     +G      +VLC +  VN+  M+ TMAHELIHA+DQC  ++D S C H+AC+EIRA+N SG+C F  E++RG+     +  + CVKRRA LS++    C
Sbjct:   70 SSPIVRFMRDELARAGCPFPPGLFRCQPCDAGAPAAIAGGFVP----TQG------IVLCQETLVNRDHMEDTMAHELIHAFDQCTTRVDWSQCAHLACSEIRAANLSGDCKFGRELKRGNWALAAKHHQACVKRRAILSLQNAKNC 206          
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A0C9X6V8_9AGAR (Mitochondrial inner membrane protease ATP23 n=2 Tax=Laccaria TaxID=29882 RepID=A0A0C9X6V8_9AGAR)

HSP 1 Score: 125 bits (314), Expect = 4.400e-33
Identity = 63/143 (44.06%), Postives = 87/143 (60.84%), Query Frame = 1
Query:    7 TGPKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTKDAKGKLSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGC 435
            + P + F+ + L+  GCE+P S   C PC+    SGGF P             VVLCS    +Q  M++T+AHELIH YDQC+ K+D SN  H AC+EIRA+N SG+C F+ E+RRG + +  Q + C++RR+  SV A P C
Sbjct:   64 SSPIIVFMLKHLKLSGCEVPPSNILCAPCD-QTKSGGFSPDP---------GAVVLCSGHFFSQKHMEYTLAHELIHMYDQCKFKVDWSNLRHHACSEIRANNLSGDCRFSQELRRGFIAFSKQHQACIRRRSVESVAANPAC 196          
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A7S3BYE0_9VIRI (Mitochondrial inner membrane protease ATP23 n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BYE0_9VIRI)

HSP 1 Score: 123 bits (309), Expect = 8.060e-33
Identity = 63/142 (44.37%), Postives = 87/142 (61.27%), Query Frame = 1
Query:   13 PKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTKDAKGKLSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVK-LDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGC 435
            P V+F+ +K+E+ GC +P S  +C  C   +++GGF P             VVLC++   +Q  +D  + HEL+HAYDQCRVK +D  +C H AC+EIRA+N SG+C  + EV RG+L     Q+ CVKRRA LSV   P C
Sbjct:   22 PFVRFMLQKMEEAGCAVPKSFISCETCGSAEVNGGFRPDEG----------VVLCAEHMHSQADVDAVLTHELVHAYDQCRVKNIDWCDCNHHACSEIRAANLSGDCWMSREVARGNLTLSKGQQACVKRRAALSVAMNPNC 153          
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Match: A0A4P9Y0Y2_9FUNG (Mitochondrial inner membrane protease ATP23 n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y0Y2_9FUNG)

HSP 1 Score: 124 bits (310), Expect = 8.150e-33
Identity = 60/141 (42.55%), Postives = 88/141 (62.41%), Query Frame = 1
Query:   13 PKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTKDAKGKLSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTEIRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGC 435
            P V+F+  +L K GC   +    C PC+ +  SGGF P          +  + LC ++ +N+T M+ T++HELIHAYD CR K+  ++  H AC+EIRA+N SG+C +  E+RRG++ +  Q + CVKRRA LSVK +P C
Sbjct:   38 PMVRFMMAELSKAGCPFESRHLRCLPCD-LTRSGGFGP----------KEGIALCQNRFINKTHMEDTLSHELIHAYDHCRFKVQWNDIKHHACSEIRAANLSGDCKWTRELRRGNISFVKQHQACVKRRAILSVKQSPSC 167          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16307.4307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCH1_9PHAE5.380e-9790.48Mitochondrial inner membrane protease ATP23 n=2 Ta... [more]
A0A2R5G548_9STRA1.070e-4048.03Mitochondrial inner membrane protease ATP23 n=1 Ta... [more]
A0A7S2W3M8_9STRA1.160e-4046.15Mitochondrial inner membrane protease ATP23 n=1 Ta... [more]
A0A835Z5N3_9STRA8.830e-3844.74Mitochondrial inner membrane protease ATP23 n=1 Ta... [more]
A0A427XWK6_9TREE7.540e-3446.15Mitochondrial inner membrane protease ATP23 n=1 Ta... [more]
A0A8H7Q8S6_9FUNG2.930e-3343.36Mitochondrial inner membrane protease ATP23 n=1 Ta... [more]
A0A4P9XF07_9FUNG4.030e-3343.54Mitochondrial inner membrane protease ATP23 n=1 Ta... [more]
A0A0C9X6V8_9AGAR4.400e-3344.06Mitochondrial inner membrane protease ATP23 n=2 Ta... [more]
A0A7S3BYE0_9VIRI8.060e-3344.37Mitochondrial inner membrane protease ATP23 n=1 Ta... [more]
A0A4P9Y0Y2_9FUNG8.150e-3342.55Mitochondrial inner membrane protease ATP23 n=1 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16307contigL-elsbetiae_contig16307:1290..2998 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score287.3
Seed ortholog evalue4e-75
Seed eggNOG ortholog2880.D8LT69
KEGG koko:K12492,ko:K18156
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0016020,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.metalloendopeptidase activity
EggNOG OGsKOG3314@1,KOG3314@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029,ko04131
Ec32 ortholog descriptionPeptidase M76, ATP23
Ec32 orthologEc-12_005480.1
Exons3
Model size456
Cds size456
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16307.4307.1prot_L-elsbetiae_contig16307.4307.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig16307 1290..2998 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815673.9160922-CDS-L-elsbetiae_contig16307:1289..14541622815673.9160922-CDS-L-elsbetiae_contig16307:1289..1454Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16307 1290..1454 +
1691683029.7376292-CDS-L-elsbetiae_contig16307:1289..14541691683029.7376292-CDS-L-elsbetiae_contig16307:1289..1454Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16307 1290..1454 +
1622815673.9336643-CDS-L-elsbetiae_contig16307:2056..21911622815673.9336643-CDS-L-elsbetiae_contig16307:2056..2191Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16307 2057..2191 +
1691683029.7516794-CDS-L-elsbetiae_contig16307:2056..21911691683029.7516794-CDS-L-elsbetiae_contig16307:2056..2191Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16307 2057..2191 +
1622815673.94666-CDS-L-elsbetiae_contig16307:2842..29981622815673.94666-CDS-L-elsbetiae_contig16307:2842..2998Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16307 2843..2998 +
1691683029.7598875-CDS-L-elsbetiae_contig16307:2842..29981691683029.7598875-CDS-L-elsbetiae_contig16307:2842..2998Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16307 2843..2998 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig16307.4307.1

>prot_L-elsbetiae_contig16307.4307.1 ID=prot_L-elsbetiae_contig16307.4307.1|Name=mRNA_L-elsbetiae_contig16307.4307.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=152bp
SLTGPKVKFLREKLEKLGCEMPTSRFTCRPCEGMDISGGFVPPTKDAKGK
LSRAEVVLCSDKGVNQTMMDHTMAHELIHAYDQCRVKLDRSNCLHVACTE
IRASNTSGECSFNMEVRRGHLKWGGQQKECVKRRAELSVKATPGCEDRVS
QA
back to top

mRNA from alignment at L-elsbetiae_contig16307:1290..2998+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig16307.4307.1 ID=mRNA_L-elsbetiae_contig16307.4307.1|Name=mRNA_L-elsbetiae_contig16307.4307.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1709bp|location=Sequence derived from alignment at L-elsbetiae_contig16307:1290..2998+ (Laminarionema elsbetiae ELsaHSoW15)
TCACTCACAGGTCCGAAGGTAAAGTTCTTGCGAGAAAAGCTGGAGAAACT GGGGTGCGAGATGCCGACAAGCAGGTTTACGTGTCGGCCGTGTGAGGGGA TGGACATCTCTGGCGGTTTCGTCCCGCCCACAAAAGACGCCAAAGGAAAG CTCTCCCGCGCCGAGGTAAAGAGTACATAGATAGGGGGGGGGGGGGTCGC TGGTTGGCACGGATTGCTTGCATTTTAGAGGCGACCAGGGTCGGCTTTGC CCCCCACTGGTTTGGGTATTTCCATTTTTAGAGCGAAGTCACAAAAGCCA AGCGCTGCCTCGCCTTGGTGGTTGTGTGCGTGACTGGCTCTCGCTCGGAT ATATCGGCGGAATGCCCTACAGTATTCTCACTACTACGGTAACACCTATG CCACCACGCCCCTCGTTGATTCAGCACCCACGTCTTGTGTCCAACGTTTT CACTATATTTATTTACCCTATGGTAAATAGGCACGTGTTCTGCCATCAGG AAAAGCGCTCTCTTGTGACTCTCTCTTGTGCCACCTGCTGTGTATCGTAA GTCTGTCTCCCGCTGTCGTCGCGCAAGTCTTTGGCTCTACCCTGCCTTCC TTGCGTTGATCTTGTTGCTCGCCTCTTGTAATTACTTCGATGCCCCGCTG CTCGTTTTGAGGTGTTCCCCCACGGCCTGATCACCTGCCCGGCTGCCTGC CTGCCCGTCCATCTGCATGTGATGATGCTTGTGATTGGACGCTCGGCCGG CCGGCCCGACCGCGCAGGTGGTGCTCTGCAGCGATAAGGGGGTGAACCAG ACGATGATGGACCACACGATGGCGCACGAGCTGATCCACGCGTACGACCA GTGCCGGGTGAAGCTGGACCGCTCCAACTGCTTGCACGTAGCTTGCACGG AGGTGTGTATGTATATACTTGTATGTATGTATGTATGTATGTATGTATGT ATGTATATGTGATAAGTTGGTCGAGGATTTGTGCACTGGCTGCTGCTGCT GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTACTGCTGC CTTGAACTGCTCGAGTGTGTTGTACCACCTTTTGTCGAAGCAGGTGCGTC GTCCGCTGAGGTCGAACTTTTGAAACAAAAGAATCGCCGTGCGCAGGCAG CATTTTGTTATGTTTACCCGCGCCAAATACCCCAGCACGCAGGAGCGAGC GCCTTGTCGACAACGGTCCCAAAACTCACGCTTGAAAGCCCTTCGTTCCA AGGAAACACGCGAGGAGCCCGTATCCTACGAACCTGCTGAAATCCAGGCA GGCAGTTTTGCGCCGCCCCGTGAGCGTCTTGGGGAGTATCCAGCACGTGC AAATCCAGCCCTAAATCTGCGCCACATTGGGGCGTCTTTGTGAGCAGCCC TCGCGAATCCAACCCTAAAATAACTGTTTGTTTGCAAACCGACCTGGCCT GTTAAAGCTGAACCTCTTTACGGTTGCGATGTGTGCGGGGATGCGGTGTG CGGCGCGACATGTCGAAACGCCACCCTGGGCCTGGCTGGCCCCCCAACGC CAGATCCGTGCCTCCAACACCAGCGGGGAGTGCTCCTTCAACATGGAGGT CCGACGGGGGCACCTGAAGTGGGGGGGGCAGCAAAAGGAGTGCGTGAAGC GGCGAGCGGAGCTCTCGGTGAAGGCGACACCGGGCTGTGAGGATAGAGTG AGTCAAGCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig16307:1290..2998+

>mRNA_L-elsbetiae_contig16307.4307.1 ID=mRNA_L-elsbetiae_contig16307.4307.1|Name=mRNA_L-elsbetiae_contig16307.4307.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=912bp|location=Sequence derived from alignment at L-elsbetiae_contig16307:1290..2998+ (Laminarionema elsbetiae ELsaHSoW15)
TCACTCACAGGTCCGAAGGTAAAGTTCTTGCGAGAAAAGCTGGAGAAACT
GGGGTGCGAGATGCCGACAAGCAGGTTTACGTGTCGGCCGTGTGAGGGGA
TGGACATCTCTGGCGGTTTCGTCCCGCCCACAAAAGACGCCAAAGGAAAG
CTCTCCCGCGCCGAGTCACTCACAGGTCCGAAGGTAAAGTTCTTGCGAGA
AAAGCTGGAGAAACTGGGGTGCGAGATGCCGACAAGCAGGTTTACGTGTC
GGCCGTGTGAGGGGATGGACATCTCTGGCGGTTTCGTCCCGCCCACAAAA
GACGCCAAAGGAAAGCTCTCCCGCGCCGAGGTGGTGCTCTGCAGCGATAA
GGGGGTGAACCAGACGATGATGGACCACACGATGGCGCACGAGCTGATCC
ACGCGTACGACCAGTGCCGGGTGAAGCTGGACCGCTCCAACTGCTTGCAC
GTAGCTTGCACGGAGGTGGTGCTCTGCAGCGATAAGGGGGTGAACCAGAC
GATGATGGACCACACGATGGCGCACGAGCTGATCCACGCGTACGACCAGT
GCCGGGTGAAGCTGGACCGCTCCAACTGCTTGCACGTAGCTTGCACGGAG
ATCCGTGCCTCCAACACCAGCGGGGAGTGCTCCTTCAACATGGAGGTCCG
ACGGGGGCACCTGAAGTGGGGGGGGCAGCAAAAGGAGTGCGTGAAGCGGC
GAGCGGAGCTCTCGGTGAAGGCGACACCGGGCTGTGAGGATAGAGTGAGT
CAAGCCATCCGTGCCTCCAACACCAGCGGGGAGTGCTCCTTCAACATGGA
GGTCCGACGGGGGCACCTGAAGTGGGGGGGGCAGCAAAAGGAGTGCGTGA
AGCGGCGAGCGGAGCTCTCGGTGAAGGCGACACCGGGCTGTGAGGATAGA
GTGAGTCAAGCC
back to top