mRNA_L-elsbetiae_contig1626.4276.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1626.4276.1
Unique NamemRNA_L-elsbetiae_contig1626.4276.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1626.4276.1 vs. uniprot
Match: D7G330_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G330_ECTSI)

HSP 1 Score: 404 bits (1037), Expect = 3.030e-132
Identity = 217/315 (68.89%), Postives = 248/315 (78.73%), Query Frame = 2
Query:  188 YISTMATIQAAQEAAENVIDVTTSILKIGEDMPLVGGLCTAVLNAKDMVDEASRNKEELDKLCARCRGITVQVVEKLRGTPSLNIDVSTLEGCVEELEKVAKRYGRKCWCTRLAQFRKDGEDIQDLRTRIDSAINDLTAAGVVEM-NLALQQFGEILARLQPGPKLAXXXXXXXXXXSFHVVRDGVVDRVCKILGGDGGPAVAALTGQSGAGKTTSAAAMVGERQGPIRPRVGETENQARTRLDCLRAHFSDGVVWLQVGMGEGATDRLPTLMRKLAKALHEDVMKSHVDAPTLGEAGESYVKRIVEQESLRCAL 1129
            Y+S MAT          VI+VTTSILKIGED+P VGGLCTAVLNAKDMVD+AS N+ +L+KLC RC GITVQVVEKL+G   L ++VS LE CV+ELE+VA+RYG+K  CTRL  F+KD EDI+DL  RI +AI+DLTAAGVVE+ NL  QQ GEILARLQP PKLA          S+H +RDGVVDRV  ILGGDGGPAVAAL G+SGAGKTT+AAAMVGERQGPI P   E E QA TRLD LRA FSDGVVWL+VG G G  DRLP LMRKLAKALHE+V+KS+VD P +GE GESYVK+IVEQESL+C +
Sbjct:    8 YVSIMAT---------EVIEVTTSILKIGEDIPFVGGLCTAVLNAKDMVDKASDNQAKLEKLCERCCGITVQVVEKLKGPTPLMVNVSPLEDCVKELEEVAERYGKKSCCTRLTHFQKDDEDIRDLEKRISTAIDDLTAAGVVEVGNLMQQQVGEILARLQPRPKLAPVPPGVPMGQSWHTMRDGVVDRVYDILGGDGGPAVAALGGRSGAGKTTAAAAMVGERQGPIHPLARENEEQAGTRLDRLRARFSDGVVWLRVGKGAGVADRLPLLMRKLAKALHEEVLKSYVDGPGIGEDGESYVKKIVEQESLKCRV 313          
BLAST of mRNA_L-elsbetiae_contig1626.4276.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 1.620e-87
Identity = 165/264 (62.50%), Postives = 195/264 (73.86%), Query Frame = 1
Query: 1126 LVVADDACEPQVVEKLRETGMWVLMTTRLPEMVETNERVVMDTLTET*AEDVLRGAAELPRGERLCDAAVRVLKICGGVAMDIAFVGSWIRHVETK---RKEDVWARAVENIEAQGGRV-----------DAGRADNRRAVLRAGFEYLGTENVLAQKLYAELAVFPDGHAFGKSDAAVLLGDGEVATKPMSILERWGVLKADASQKYRIHDAHADFARGELMGWDKIRKPAVERWTKHISRLNFAAEMDVYALLRMWRALEKV 1875
            LVVADD  E  VV+KLRETGMWVL+TTR PEM E  ERVVMDTL    AEDVLRGAAELP GERLCDA+++VL+ICG VAMD AFVGSW     T    +    W R VE + AQ   V           D  RA NR AVLRAGF+Y+G E+ LAQ+LY +LAVFP+G  FG+SDAAVLL + EVA  P+SILERWGVL+ DAS+KYR HDAHADFAR +LM  + +R+PAVERWT+HISRL+FA  ++++ LL MWRALE+V
Sbjct:  296 LVVADDVWEASVVQKLRETGMWVLLTTRFPEMGEPEERVVMDTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEELTAQIDHVRGQMKVGNTGEDNDRAINRLAVLRAGFKYIGREDPLAQELYVKLAVFPEGFLFGESDAAVLLENEEVAKGPISILERWGVLRTDASEKYRTHDAHADFARKKLMDRNDLREPAVERWTEHISRLDFAVGVEIFVLLPMWRALEEV 559          
BLAST of mRNA_L-elsbetiae_contig1626.4276.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 1.700e-83
Identity = 177/326 (54.29%), Postives = 223/326 (68.40%), Query Frame = 2
Query:  194 STMAT----IQAAQEAAE----NVID-VTTSILKIGEDMPLVGGLCTAVLNAKDMVDEASRNKEELDKLCARCRGITVQVVEKLRGTPSLNIDVSTLEGCVEELEKVAKRYGRKCWCTRLAQFRKDGEDIQDLRTRIDSAINDLTAAGVVEMNLALQQFGEILARLQPGP--KLAXXXXXXXXXXSFHVVRDGVVDRVCKILGGDGGPAVAALTGQSGAGKTTSAAAMVGERQGPIRPRVGETENQARTRLDCL---RAHFSDGVVWLQVGMGEGATDRLPTLMRKLAKALHEDVMKSHVDAPTLGEAGESYVKRIVEQESLRCAL 1129
            STMAT    +Q+AQE A      V++ V T I++IG   P+V  LC A+L AK +VD ASRNKEEL +LC RC  ITVQV++K + + +  IDVS L+GCV++L++VAKRY  +    RLAQFR+DG+DIQ LR RI++ +  +  AGVV +   L+   +ILARLQP P  KLA          ++H VRD V D V KIL GD  PAVAALTG+SGAGK+T+AA MV  R+  IR    ETE+QARTR+D L   RA FSDGVV+L+VG GEGA DRLP LMRKLAKALHEDV+K    AP  GE GESYVK+++ +   RC +
Sbjct:   77 STMATRGDAVQSAQETARLGISTVVESVATGIIEIGAATPVVAPLCVALLKAKGIVDGASRNKEELGELCERCDLITVQVIDKAKASNTSTIDVSPLQGCVDKLDEVAKRYHDQGCLARLAQFRRDGDDIQRLRARIEAIVPIMGLAGVVNIMDRLEDVRQILARLQPRPRPKLAPVPPGLPAGEAWHAVRDHVEDEVYKILSGDE-PAVAALTGKSGAGKSTAAADMVRNRKVDIRGLDDETEDQARTRMDRLERVRARFSDGVVYLRVGKGEGAADRLPDLMRKLAKALHEDVLKKTAGAPEAGEKGESYVKKMMTRTKKRCLV 401          
BLAST of mRNA_L-elsbetiae_contig1626.4276.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 7.220e-49
Identity = 117/270 (43.33%), Postives = 166/270 (61.48%), Query Frame = 1
Query: 1126 LVVADDACEPQVVEKLRETGMWVLMTTRLPEMVETN--ERVVMDTLTET*AEDVLRGAAELPRGERLCDAAVRVLKICGGVAMDIAFVGSWIRHVETKRKEDVWARAVENIEAQGGRV----DAGRADN-----RRAVLRAGFEYL--GTENVLAQKLYAELAVFPDGHAFGKSDAAVLLGDGEVATKP-------MSILERWGVLKADASQKYRIHDAHADFARGELMGWDKIRKPAVERWTKHISRLNFAAEMDVYALLRMWRALEKV 1875
            LVVAD+  E  VV KL ETGMWVL++TR   +V+ +  + VV+D L++  AE VL+ AAELPR  RL D AV ++K+CG VAMD+AFVG W   V  +     W+ A   I  +  +V    D   A+N     R+A+L+ GFE L  G+++   Q+LY  LAV PDGHAF   DAAVLL D   +T+        + +LERW ++++ A   YR+HDAH DFAR  L+    +R+PA++RWT+++S L+     D Y L  +W A+E++
Sbjct:  307 LVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWST-VRGRHDPASWSDAASTIRTEMEKVGHDPDNDSAENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSIIRS-AQGTYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERL 574          
BLAST of mRNA_L-elsbetiae_contig1626.4276.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 2.220e-46
Identity = 120/270 (44.44%), Postives = 160/270 (59.26%), Query Frame = 1
Query: 1126 LVVADDACEPQVVEKLRETGMWVLMTTRLPEMV-ETNERVV-MDTLTET*AEDVLRGAAELPRGERLCDAAVRVLKICGGVAMDIAFVGSWIRHVETKRKEDVWARAVENIEAQGGRVDAGRADN---------RRAVLRAGFEYL--GTENVLAQKLYAELAVFPDGHAFGKSDAAVLLGDGEVATKP-------MSILERWGVLKADASQKYRIHDAHADFARGELMGWDKIRKPAVERWTKHISRLNFAAEMDVYALLRMWRALEKV 1875
            LVVAD+  E +VV KL ETGMWVL++TR   +V E +  VV +D L+E  A  VLR AAELP   ++   AV ++++CG VAMD+AFVG W   V  ++    W+ AV  +  + G+V +G A           R+A+LRAGFE L  G+++   Q+LY  LAVFPDGHAF   DAAVLL D E   +        +  LERW VL+++    YR+HDAH+ FAR  LM    +R+PAV+RW   IS L      D Y L  +W A+E V
Sbjct:  163 LVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWST-VRGRQDRMAWSDAVSKVREEMGKVGSGDASEKLAETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDREPCAEDEASVAVVVDTLERWTVLRSEQGA-YRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLWLAVEGV 430          
BLAST of mRNA_L-elsbetiae_contig1626.4276.1 vs. uniprot
Match: A0A6H5K0A6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0A6_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 6.810e-46
Identity = 101/152 (66.45%), Postives = 114/152 (75.00%), Query Frame = 2
Query:  614 VEMNLALQQFGEIL--ARLQPGPKLAXXXXXXXXXXSFHVVRDGVVDRVCKILGGDGGPAVAALTGQSGAGKTTSAAA-MVGERQGPIRPRVGETENQARTRLDCLRAHFSDGVVWLQVGMGEGATDRLPTLMRKLAKALHEDVMKSHVDAP 1060
            V+ ++ L+Q   +L  ARL P PKL           S+H +RDGVVDRV  ILGGDGGPA AAL GQ GAGKTT+AAA MVGERQGPI P   E E QARTRLD LRA FSDGV+WL+VG G GA+DRLP LMRKLAKALHE+V+KSHVDAP
Sbjct:  254 VDNHVFLRQTPPVLVQARLPPRPKLVSVPPGVPMGQSWHTMRDGVVDRVYAILGGDGGPAAAALGGQRGAGKTTAAAAAMVGERQGPIHPLAHENEEQARTRLDRLRARFSDGVMWLRVGKGAGASDRLPLLMRKLAKALHEEVLKSHVDAP 405          
BLAST of mRNA_L-elsbetiae_contig1626.4276.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 4.540e-44
Identity = 124/313 (39.62%), Postives = 175/313 (55.91%), Query Frame = 1
Query: 1054 CSNVGRGRRELREED----------RGAGVAAVR-LVVADDACEPQVVEKLRETGMWVLMTTRLPEMVETNERVVM--DTLTET*AEDVLRGAAELPRGERLCDAAVRVLKICGGVAMDIAFVGSWIRHVETKRKEDVWARAVENIEAQGGRVDAGRADN---------RRAVLRAGFEYL--GTENVLAQKLYAELAVFPDGHAFGKSDAAVLLGDGEVATKP-------MSILERWGVLK--------ADASQKYRIHDAHADFARGELMGWDKIRKPAVERWTKHISRLNFAAEMDVYALLRMWRALEKV 1875
            C  VG GRR    +D          RG G   ++ LVVAD+  E +VV KL ETGMWVL++TR  E+V  +E  V+  D ++E  AE VLR A+ELP   RL D AV ++++CG VAMD+AFVG W   V  +     W+ A   + A+ G+++  R            R+AVL+AGFE L  G+++   Q+LY  LAV PDG  F   DAAVLL D + + +        + ILERW VL+        A     Y +HDAH+DFAR +LM    +R+PA+ RWT++IS L+    +  + +  +W  +E+V
Sbjct:  293 CEEVG-GRRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWST-VRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQV 603          
BLAST of mRNA_L-elsbetiae_contig1626.4276.1 vs. uniprot
Match: A0A6H5KUE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUE6_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 1.450e-43
Identity = 103/201 (51.24%), Postives = 128/201 (63.68%), Query Frame = 2
Query:  518 TRLAQFRKDGEDIQDLRTRIDSAINDLTAAGVVEMNLALQQFGEILARLQPGPKLAXXXXXXXXXXSFHVVRDGVVDRVCKILGGDGGPAVAALTGQSGAGKTTSAAAMVGERQGPIRPRVGETENQARTRLDCLRAHFSDGVVWLQVGMGEGATDRLPTLMRKLAKALHEDVMKSHVDAPTLGEAGESYVKRIVEQESLR 1120
            +RLA+FR  G++IQ LR  I + +  +  AGVV ++  L++   +LARLQP P+LA          S+  VR GV DRVC+ILGG   PAVAALTG+SG GKTTSAAA++ ER GPI PR GETE+ ARTRLD                 GEG  +R P+LM  LAKA +EDVM+  VD P  GE GESYV + V +ESLR
Sbjct:   27 SRLARFRAFGDNIQGLRASIKAVVPIMGLAGVVNLDEKLEK---VLARLQPRPQLAPVPEGIPVRQSWPAVRHGVEDRVCRILGGGRRPAVAALTGRSGTGKTTSAAAVLRER-GPIHPRAGETEDMARTRLD----------------RGEGDENRSPSLMHTLAKARYEDVMEKRVDTPAAGEDGESYVNKFVSRESLR 207          
BLAST of mRNA_L-elsbetiae_contig1626.4276.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 1.350e-41
Identity = 115/285 (40.35%), Postives = 158/285 (55.44%), Query Frame = 1
Query: 1099 RGAGVAAVR---LVVADDACEPQVVEKLRETGMWVLMTTRLPEMVETNERVVM--DTLTET*AEDVLRGAAELPRGERLCDAAVRVLKICGGVAMDIAFVGSWIRHVETKRKEDVWARAVENIEAQ----GGRVDAGRADN------RRAVLRAGFEYLGTENVLAQKLYAELAVFPDGHAFGKSDAAVLLGDG-----------EVATKPMSILERWGVLKADASQKYRIHDAHADFARGELMGWDKIRKPAVERWTKHISRLNFAAEMDVYALLRMWRALEKV 1875
            RG G AA R   LVVADD  E  ++E+LR TGMWVL T+R P++VE  E  V+  D L++  AE +LRGAAEL  G  L  AA +V++ C  +A  + FVG W   V+    E+ WA AV  I+A+     G  +A ++D       R A+LRAGF  L  +N     LY  LAV PDG AFG  +AAV L D              A K ++ LE+W V+    +  +R+HDAH+DFAR +L   + +R  A+ RW    SRL+    MD + ++ +W A E +
Sbjct:  360 RGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWST-VKGSDDEEDWAEAVSAIDAEMSAMAGEANAQKSDEDLSGVKRVAILRAGFLDLAAQNGFNPLLYLSLAVMPDGRAFGAKEAAVFLFDDWAEERASQRRTRQAAKVVANLEQWAVVTMHGNL-FRMHDAHSDFARNKLKRSEDVRASALRRWRGFTSRLDTIRSMDYFEMVDLWHATEMI 642          
BLAST of mRNA_L-elsbetiae_contig1626.4276.1 vs. uniprot
Match: A0A6H5L204_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L204_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 4.410e-27
Identity = 89/221 (40.27%), Postives = 117/221 (52.94%), Query Frame = 1
Query: 1219 MVETNERVVMDTLTET*AEDVLRGAAELPRGERLCDAAVRVLKICGGVAMDIAFVGSW--IRHVETKRKEDVWA--RAVENIEAQGGRVDAGRADNRRAVLRAGFEYLGTENVLAQKLYAELAVFPDGHAFGKS-----------DAAVLLGDGEVATKPMSILERWGVLK-----------ADASQKYRIHDAHADFARGELMG-WDKIRKPAVERWTKH 1800
            M+   ERV +D L  T A +VLRGAA LPR   LCD A++VL+  GGVAMDIAFVGSW  +R  ++   +  WA  RAVE IEAQGG V   R  NR A+LRAGF YL  +  LAQ+LY +LA FPD H+F              DA  +    + + +     E W V +           +DASQ + +H        GE +G  + I +  +E +  H
Sbjct:    1 MLSLAERVFVDKLGATDASNVLRGAANLPRDGDLCDDALKVLETYGGVAMDIAFVGSWSSVRTPDSCAPKSSWAWTRAVEEIEAQGGGVGVDRDANRLAILRAGFMYLARDYPLAQELYDKLAAFPDRHSFRSQTQLRFWTTKRVDAYAMFNMRKTSEEAGG--EGWWVYRPHDEQLIPMEASDASQVHAVHVLAELCCHGEKLGELEAIMRKLLEHYDAH 219          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1626.4276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7G330_ECTSI3.030e-13268.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSI2_9PHAE1.620e-8762.50NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KE50_9PHAE1.700e-8354.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZW8_ECTSI7.220e-4943.33NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KYW3_9PHAE2.220e-4644.44NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5K0A6_9PHAE6.810e-4666.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZY7_ECTSI4.540e-4439.62NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KUE6_9PHAE1.450e-4351.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFN6_ECTSI1.350e-4140.35NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5L204_9PHAE4.410e-2740.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1626contigL-elsbetiae_contig1626:8125..10719 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score151.0
Seed ortholog evalue9.7e-34
Seed eggNOG ortholog2880.D8LFN6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-24_003000.1
Exons3
Model size1875
Cds size975
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1626.4276.1prot_L-elsbetiae_contig1626.4276.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1626 8826..10052 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815671.231148-UTR-L-elsbetiae_contig1626:8124..88251622815671.231148-UTR-L-elsbetiae_contig1626:8124..8825Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1626 8125..8825 -
1691683027.9638577-UTR-L-elsbetiae_contig1626:8124..88251691683027.9638577-UTR-L-elsbetiae_contig1626:8124..8825Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1626 8125..8825 -
1622815671.2685502-UTR-L-elsbetiae_contig1626:10052..100681622815671.2685502-UTR-L-elsbetiae_contig1626:10052..10068Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1626 10053..10068 -
1691683027.997569-UTR-L-elsbetiae_contig1626:10052..100681691683027.997569-UTR-L-elsbetiae_contig1626:10052..10068Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1626 10053..10068 -
1622815671.279398-UTR-L-elsbetiae_contig1626:10536..107191622815671.279398-UTR-L-elsbetiae_contig1626:10536..10719Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1626 10537..10719 -
1691683028.0086644-UTR-L-elsbetiae_contig1626:10536..107191691683028.0086644-UTR-L-elsbetiae_contig1626:10536..10719Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1626 10537..10719 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815671.2433362-CDS-L-elsbetiae_contig1626:8825..93441622815671.2433362-CDS-L-elsbetiae_contig1626:8825..9344Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1626 8826..9344 -
1691683027.9760704-CDS-L-elsbetiae_contig1626:8825..93441691683027.9760704-CDS-L-elsbetiae_contig1626:8825..9344Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1626 8826..9344 -
1622815671.2554896-CDS-L-elsbetiae_contig1626:9596..100521622815671.2554896-CDS-L-elsbetiae_contig1626:9596..10052Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1626 9597..10052 -
1691683027.9864914-CDS-L-elsbetiae_contig1626:9596..100521691683027.9864914-CDS-L-elsbetiae_contig1626:9596..10052Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1626 9597..10052 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1626.4276.1

>prot_L-elsbetiae_contig1626.4276.1 ID=prot_L-elsbetiae_contig1626.4276.1|Name=mRNA_L-elsbetiae_contig1626.4276.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=325bp
MATIQAAQEAAENVIDVTTSILKIGEDMPLVGGLCTAVLNAKDMVDEASR
NKEELDKLCARCRGITVQVVEKLRGTPSLNIDVSTLEGCVEELEKVAKRY
GRKCWCTRLAQFRKDGEDIQDLRTRIDSAINDLTAAGVVEMNLALQQFGE
ILARLQPGPKLAPVPKKAPVTKSFHVVRDGVVDRVCKILGGDGGPAVAAL
TGQSGAGKTTSAAAMVGERQGPIRPRVGETENQARTRLDCLRAHFSDGVV
WLQVGMGEGATDRLPTLMRKLAKALHEDVMKSHVDAPTLGEAGESYVKRI
VEQESLRCALWWPTMRVSHKWSRS*
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mRNA from alignment at L-elsbetiae_contig1626:8125..10719-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1626.4276.1 ID=mRNA_L-elsbetiae_contig1626.4276.1|Name=mRNA_L-elsbetiae_contig1626.4276.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2595bp|location=Sequence derived from alignment at L-elsbetiae_contig1626:8125..10719- (Laminarionema elsbetiae ELsaHSoW15)
GCTGACACCGCTGTGAAGAAGTGGTGTGGAGCTGCGGGGGATTTGTTTGA GCTCAAAGCTCTTTTGTGGAAAGGGAGGACCACTAGAGATCGGAGGTGTT GTCAACTGCTGGACGGAACACTTGTGTATTTGTCCGCAACACGCACGGGG AGGGAGAGCCAGACTGCTGTTGGGGCGTGCGTGGTGAGTGGTTTTCCTGG TTGATCGCACGGTACCGGGAGGTGGTTGTTGTGTGGATGGGCCATCTGGT ATGCCCAGCGTACGCCAAGGCTTACGGGCGTGGAAGAAGCCGCGTAAAAC TTTGTGTCCGCACTGAACTGCAGACGTGGTACCAGAAAAAAATCGGTGTG ACGCCGAATACCACCCCCCTCCTAGCCTACTGCTCCATCTACTGCATATA GCATTTTTCCGCCAGTGACTTCACACACCACTGTCGGGTGTGAGATTCGA ACTCACCAGTCTTTCTTTGCAGGAGGTACGAATGTGCGACAGGGCTGCCC TGTGGAACGCTCCGGTGTGATGAGATGTTTTACCAGAAAAAAAACAGACG CGAACCTGAATCAACGCACGCATAGAAATACCTCATGCAGTGGGGAGCGC CACACTGCTCTGCTCGACTGAGACGTTACCTATCCCTCGCGCTTGCTACA GGCGGTACATTTCGACCATGGCCACCATCCAGGCCGCGCAAGAGGCCGCT GAGAACGTGATAGATGTTACGACAAGTATTCTCAAGATCGGTGAGGACAT GCCACTAGTGGGGGGTCTCTGCACAGCGGTTCTGAACGCCAAGGATATGG TAGACGAGGCCAGTCGCAACAAAGAGGAGCTGGACAAACTTTGCGCGCGG TGCCGCGGGATCACGGTGCAGGTGGTGGAGAAACTTCGGGGTACGCCGTC CCTGAATATTGACGTCTCTACCCTCGAAGGATGTGTCGAGGAGCTCGAGA AAGTGGCCAAACGCTACGGCAGAAAATGTTGGTGCACCAGGCTCGCGCAA TTTCGCAAAGACGGCGAAGATATCCAAGATCTGAGGACGAGAATCGACAG CGCAATCAATGATCTAACCGCCGCGGGCGTCGTGGAGATGAACCTCGCGC TACAGCAATTCGGGGAGATTTTGGTGAGACTGCCTACCTTCGAGTCCTAT CACCGGCATACAAAGTAGGACTCTAGAGTTCGTGGAAACAACAGGCGATG GGGCGAGGGCTGTGTGTATATCGGCTTCAACTTTTGATTCATCCCCCTTT CACGTGCTACTCTGTTTCGTTATGTCGAAGTTGGACCTCTCAATATTGAA ACATGCTTCAACTACGTCACGCAATGCCTAAACAAGGAATGCCTCCGCCA TTTCACACTCACCCGTTCTACACAGGCTCGTCTGCAGCCAGGACCCAAGC TAGCACCGGTGCCGAAAAAGGCTCCTGTCACCAAGTCATTTCACGTTGTG CGCGATGGGGTGGTAGACAGAGTGTGCAAGATCCTCGGTGGCGACGGAGG GCCAGCGGTGGCCGCACTGACGGGCCAAAGCGGGGCGGGTAAAACCACCT CCGCCGCCGCCATGGTGGGCGAGCGACAGGGCCCTATCCGTCCTCGAGTT GGTGAGACCGAGAATCAGGCACGTACCCGCTTGGATTGTTTGAGGGCGCA CTTTTCCGACGGCGTTGTGTGGCTGCAAGTGGGCATGGGGGAGGGTGCGA CAGACCGCCTACCCACTCTGATGCGCAAGTTGGCCAAGGCACTCCACGAG GACGTGATGAAATCGCATGTCGATGCTCCAACGTTGGGCGAGGCCGGCGA GAGCTACGTGAAGAGGATCGTGGAGCAGGAGTCGCTGCGGTGCGCCTTGT GGTGGCCGACGATGCGTGTGAGCCACAAGTGGTCGAGAAGCTGAGGGAGA CGGGCATGTGGGTGCTCATGACCACGCGATTGCCCGAGATGGTGGAAACA AACGAGAGGGTGGTCATGGACACACTGACAGAGACTTAGGCCGAGGACGT TCTTCGCGGTGCGGCTGAGCTGCCGCGTGGTGAACGTTTGTGCGACGCCG CGGTTAGAGTTTTGAAGATCTGCGGTGGTGTGGCGATGGACATCGCGTTC GTGGGGAGCTGGATTCGTCATGTGGAAACCAAGCGCAAGGAGGATGTGTG GGCACGTGCCGTGGAAAATATCGAGGCCCAAGGTGGAAGGGTTGACGCCG GGAGGGCCGACAACCGACGTGCGGTTCTGCGCGCCGGCTTCGAGTACCTT GGGACGGAAAATGTGTTGGCCCAGAAGCTGTATGCTGAGCTCGCGGTGTT CCCCGACGGCCACGCCTTCGGAAAATCGGACGCGGCGGTACTTCTGGGTG ATGGAGAGGTCGCGACGAAACCGATGTCGATTTTGGAGCGGTGGGGTGTT CTAAAGGCGGATGCATCACAAAAATACCGCATACACGACGCCCACGCGGA CTTCGCGAGAGGCGAGCTCATGGGTTGGGATAAAATTCGCAAACCAGCCG TGGAAAGGTGGACTAAACACATTTCTCGTCTGAACTTTGCGGCTGAGATG GACGTCTACGCGCTGTTGCGCATGTGGCGGGCGTTGGAGAAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1626:8125..10719-

>mRNA_L-elsbetiae_contig1626.4276.1 ID=mRNA_L-elsbetiae_contig1626.4276.1|Name=mRNA_L-elsbetiae_contig1626.4276.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1950bp|location=Sequence derived from alignment at L-elsbetiae_contig1626:8125..10719- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCACCATCCAGGCCGCGCAAGAGGCCGCTGAGAACGTGATAGATGT
TACGACAAGTATTCTCAAGATCGGTGAGGACATGCCACTAGTGGGGGGTC
TCTGCACAGCGGTTCTGAACGCCAAGGATATGGTAGACGAGGCCAGTCGC
AACAAAGAGGAGCTGGACAAACTTTGCGCGCGGTGCCGCGGGATCACGGT
GCAGGTGGTGGAGAAACTTCGGGGTACGCCGTCCCTGAATATTGACGTCT
CTACCCTCGAAGGATGTGTCGAGGAGCTCGAGAAAGTGGCCAAACGCTAC
GGCAGAAAATGTTGGTGCACCAGGCTCGCGCAATTTCGCAAAGACGGCGA
AGATATCCAAGATCTGAGGACGAGAATCGACAGCGCAATCAATGATCTAA
CCGCCGCGGGCGTCGTGGAGATGAACCTCGCGCTACAGCAATTCGGGGAG
ATTTTGATGGCCACCATCCAGGCCGCGCAAGAGGCCGCTGAGAACGTGAT
AGATGTTACGACAAGTATTCTCAAGATCGGTGAGGACATGCCACTAGTGG
GGGGTCTCTGCACAGCGGTTCTGAACGCCAAGGATATGGTAGACGAGGCC
AGTCGCAACAAAGAGGAGCTGGACAAACTTTGCGCGCGGTGCCGCGGGAT
CACGGTGCAGGTGGTGGAGAAACTTCGGGGTACGCCGTCCCTGAATATTG
ACGTCTCTACCCTCGAAGGATGTGTCGAGGAGCTCGAGAAAGTGGCCAAA
CGCTACGGCAGAAAATGTTGGTGCACCAGGCTCGCGCAATTTCGCAAAGA
CGGCGAAGATATCCAAGATCTGAGGACGAGAATCGACAGCGCAATCAATG
ATCTAACCGCCGCGGGCGTCGTGGAGATGAACCTCGCGCTACAGCAATTC
GGGGAGATTTTGGCTCGTCTGCAGCCAGGACCCAAGCTAGCACCGGTGCC
GAAAAAGGCTCCTGTCACCAAGTCATTTCACGTTGTGCGCGATGGGGTGG
TAGACAGAGTGTGCAAGATCCTCGGTGGCGACGGAGGGCCAGCGGTGGCC
GCACTGACGGGCCAAAGCGGGGCGGGTAAAACCACCTCCGCCGCCGCCAT
GGTGGGCGAGCGACAGGGCCCTATCCGTCCTCGAGTTGGTGAGACCGAGA
ATCAGGCACGTACCCGCTTGGATTGTTTGAGGGCGCACTTTTCCGACGGC
GTTGTGTGGCTGCAAGTGGGCATGGGGGAGGGTGCGACAGACCGCCTACC
CACTCTGATGCGCAAGTTGGCCAAGGCACTCCACGAGGACGTGATGAAAT
CGCATGTCGATGCTCCAACGTTGGGCGAGGCCGGCGAGAGCTACGTGAAG
AGGATCGTGGAGCAGGAGTCGCTGCGGTGCGCCTTGTGGTGGCCGACGAT
GCGTGTGAGCCACAAGTGGTCGAGAAGCTGAGCTCGTCTGCAGCCAGGAC
CCAAGCTAGCACCGGTGCCGAAAAAGGCTCCTGTCACCAAGTCATTTCAC
GTTGTGCGCGATGGGGTGGTAGACAGAGTGTGCAAGATCCTCGGTGGCGA
CGGAGGGCCAGCGGTGGCCGCACTGACGGGCCAAAGCGGGGCGGGTAAAA
CCACCTCCGCCGCCGCCATGGTGGGCGAGCGACAGGGCCCTATCCGTCCT
CGAGTTGGTGAGACCGAGAATCAGGCACGTACCCGCTTGGATTGTTTGAG
GGCGCACTTTTCCGACGGCGTTGTGTGGCTGCAAGTGGGCATGGGGGAGG
GTGCGACAGACCGCCTACCCACTCTGATGCGCAAGTTGGCCAAGGCACTC
CACGAGGACGTGATGAAATCGCATGTCGATGCTCCAACGTTGGGCGAGGC
CGGCGAGAGCTACGTGAAGAGGATCGTGGAGCAGGAGTCGCTGCGGTGCG
CCTTGTGGTGGCCGACGATGCGTGTGAGCCACAAGTGGTCGAGAAGCTGA
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